prot_E-fasciculatus_F_contig156.3888.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig156.3888.1
Unique Nameprot_E-fasciculatus_F_contig156.3888.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length119
Homology
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BLAST of mRNA_E-fasciculatus_F_contig156.3888.1 vs. uniprot
Match: D7G6E2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E2_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 9.100e-60
Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0 
Query:    1 MLCSQRAMPRMRRLLSSSSDQAAEANAQLESLHEVSTAVDLAALGRRAEAASLLERAVEICSGSMGEDSALTRAAVHRLAQVFYDDQRFGAAEATLRKGESNARKQFPTELLLLSKAQV 119
            ML SQRA+PRMRRLLSSSSDQAAEANAQLESLHEVSTAVDLAALGRR EAASLLERAVEICSGSMGED ALTRAAVHRLAQV YDDQRFGAAEA LRKGESNARKQFPTELLLLSKAQ+
Sbjct:    1 MLLSQRAIPRMRRLLSSSSDQAAEANAQLESLHEVSTAVDLAALGRRTEAASLLERAVEICSGSMGEDCALTRAAVHRLAQVLYDDQRFGAAEAILRKGESNARKQFPTELLLLSKAQL 119
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig156.3888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6E2_ECTSI9.100e-6094.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 38..103
e-value: 1.2E-8
score: 35.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..112
e-value: 3.2E-9
score: 38.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 37..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig156contigE-fasciculatus_F_contig156:365..898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig156.3888.1mRNA_E-fasciculatus_F_contig156.3888.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig156 365..898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig156.3888.1 ID=prot_E-fasciculatus_F_contig156.3888.1|Name=mRNA_E-fasciculatus_F_contig156.3888.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=119bp
MLCSQRAMPRMRRLLSSSSDQAAEANAQLESLHEVSTAVDLAALGRRAEA
ASLLERAVEICSGSMGEDSALTRAAVHRLAQVFYDDQRFGAAEATLRKGE
SNARKQFPTELLLLSKAQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf