mRNA_E-fasciculatus_F_contig15593.3887.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI) HSP 1 Score: 555 bits (1429), Expect = 5.720e-192 Identity = 353/423 (83.45%), Postives = 361/423 (85.34%), Query Frame = 1
Query: 1 ENKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHGLNDGVGGGXXXXXXXXXXSKGQVRGGRKSTDSNRSSVGSS-KQISAAAAAGNSHRGHDRSSSLGQSGMAPAXXXXXXXXXXXXXXXXXXXXXXXXHIRTESGSALMGPREDCMAVEKGVWDGSGRGHGRLPSLDSVTGGLRNLHGSGGXXXXXXXXXXXXVGTEMPPTLGRLVPSAENVVSRESSPMKPGAGXXXXXXXXNRMHAGSSDYQHTGTRLDGVGTHHPTYGRSQDDLNLTPRSHFAGGPIMGLGLHQGVAGNWAAGGVHGXXXXXXXXXX--YSNSLTPSQEFFGSNGSSRNGNAYQGGSPRVLQNMHSRDDLDVLRPRKTRRTGPSFDQEGHADNQDPSHAFLAMTPRATG 1260
+NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHGLNDGVGGG K RGGRKSTDSNRSSVGSS KQ++A+ LGQSGMA XXXXXXXXXXXXXXXXXXXXX HIRTESGSALMG REDCMAVEKGVWD G GHGRLPSLD VTGGLRNLHGSGGXXXXXXXXXXX VGTEMPPTLGRLVPSAENVVSRESSPMKPGAG NRMHAGSSDYQHTG RLDG G HHPTYGRSQDDLNLTPRSHFAG PIMGLGLHQGVAGNWAAGGVHGXXXXXXXXXX Y+NSLTP+QEFFGSNGS RN N YQG SPRVLQNMHSRDDLDVLRPRKTRRTGPSFDQE HA+NQDPS AFLAM+PRA G
Sbjct: 96 QNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHGLNDGVGGGVGDGGNVP---KAGARGGRKSTDSNRSSVGSSSKQVNASXXXXXXXXXXXXX--LGQSGMAXXXXXXXXXXXXXXXXXXXXXXXG--HIRTESGSALMGRREDCMAVEKGVWDAGGHGHGRLPSLDLVTGGLRNLHGSGGXXXXXXXXXXX-VGTEMPPTLGRLVPSAENVVSRESSPMKPGAGGGGG----NRMHAGSSDYQHTGNRLDGGG-HHPTYGRSQDDLNLTPRSHFAG-PIMGLGLHQGVAGNWAAGGVHGXXXXXXXXXXXXYANSLTPNQEFFGSNGS-RNSNPYQGSSPRVLQNMHSRDDLDVLRPRKTRRTGPSFDQESHANNQDPSQAFLAMSPRAAG 503
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: A0A6H5JLW3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE) HSP 1 Score: 530 bits (1365), Expect = 1.510e-174 Identity = 339/436 (77.75%), Postives = 344/436 (78.90%), Query Frame = 1
Query: 1 ENKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPE------IPPEFAHDVHGHGLNDGVGGGXXXXXXXXXXSKGQVRGGRKSTDSNRSSVGSS-KQISAAAAAGNSHRGHDRSSSLGQSGMAPAXXXXXXXXXXXXXXXXXXXXXXXXHIRTESGSALMGPREDCMAVEKGVWDGSGRGHGRLPSLDSVTGGLRNLHGSGGXXXXXXXXXXXXVGTEMPPTLGRLVPSAENVVSRESSPMKPGAGXXXXXXXX------NRMHAGSSDYQHTGTRLDGVGTHHPTYGRSQDDLNLTPRSHFAGGPIMGLGLHQGVAGNWAAGGVHGXXXXXXXXXXYSNSLTPSQEFFGSNGSSRNGNAYQGGSPRVLQNMHSRDDLDVLRPRKTRRTGPSFDQEGHADNQDPS---HAFLAMTPRATG 1260
+NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPE IPPEFAHDVHGHGLNDGVGGG K VRGGRKSTDSNR SVGSS KQI+AA S LGQSGM XXXXXXXXXXXXXXXXXXXXX HIRTESGSALMG RED MAVEKGVWD G GHGRLPSL+ VTGGLRNLHGSG VGTEMPPTLGRLVPSAENVVSRE SPMKPGAGXXXXXXXX NRMHAGSSDYQHTG RLDG G HHPTYGRSQDDLNLTPRSHFAG PIMGLGLHQGVAGNWAAGGVHG YSNSLTP+QEFFGSNGS RN N YQG SPRVLQ MHSRDDLDVLRPRKTRRTGPSFDQE HA NQDPS AFLAM+PRATG
Sbjct: 73 QNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEEEAFPQIPPEFAHDVHGHGLNDGVGGGVGDGGNAP---KAGVRGGRKSTDSNRFSVGSSSKQINAAGXXXXXXXXXXXS--LGQSGMXXXXXXXXXXXXXXXXXXXXXXXXG--HIRTESGSALMGRREDRMAVEKGVWDAGGHGHGRLPSLNLVTGGLRNLHGSGNGGRTGNGGGQG-VGTEMPPTLGRLVPSAENVVSREPSPMKPGAGXXXXXXXXXXXXXXNRMHAGSSDYQHTGPRLDGGG-HHPTYGRSQDDLNLTPRSHFAG-PIMGLGLHQGVAGNWAAGGVHGGGPGG-----YSNSLTPNQEFFGSNGS-RNSNPYQGSSPRVLQTMHSRDDLDVLRPRKTRRTGPSFDQESHAYNQDPSPTTKAFLAMSPRATG 492
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: A0A835Z0U6_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.450e-18 Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 4 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHG 186
+K+SSFQRQLNLYGFRK+V+GNE+G Y+H F RG PE L QVRRG P PP + H V+G
Sbjct: 49 DKFSSFQRQLNLYGFRKIVKGNESGCYIHTYFRRGHPELLKQVRRGQMPPCPPRYEHKVYG 109
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: A0A835Z533_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z533_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 9.010e-18 Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 4 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 192
+K+SSFQRQLNLYGFRK+VRG EAGGYMH F+RG+ + L VRRG P PP++ ++G G
Sbjct: 47 DKFSSFQRQLNLYGFRKIVRGKEAGGYMHKDFQRGRADLLPHVRRGHMPPCPPQYERKIYGSG 109
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: D7FI12_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI12_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.130e-17 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 4 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 192
NK+SSFQRQLNLYGFRK+V+G E+G YMHP+F R +PE LS+VRRG P PPE+ V+G G
Sbjct: 71 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPELLSEVRRGVVPPCPPEYTRKVYGSG 133
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: A0A835YPY0_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY0_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.550e-17 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 4 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 192
+K+SSFQRQLNLYGFRK+VRG E+GGYMH F+RG+ + L V+RG+ P PPE+ ++G G
Sbjct: 36 DKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSG 98
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: A0A6H5L4Y2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y2_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 3.380e-17 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 4 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 192
NK+SSFQRQLNLYGFRK+V+G E+G YMHP+F R +P+ LS+VRRG P PPE+ V+G G
Sbjct: 52 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSG 114
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: A0A835YN41_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN41_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.460e-14 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 4 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHG 186
+K+SSFQRQLNLYGFRK+V+G E+G Y+H F+RG PE L QVRRG P PP + V+G
Sbjct: 69 DKFSSFQRQLNLYGFRKIVKGRESGCYIHCYFQRGHPELLKQVRRGQVPPCPPRYERKVYG 129
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: A0A6H5KNL3_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNL3_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.770e-14 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 4 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 192
NK+SSFQRQLNLYGFRK+V+G E+G YMHP F R PE+L++V+RG P PP ++ ++G G
Sbjct: 52 NKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDSPEKLTEVKRGVVPPCPPCYSRKIYGSG 114
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Match: A0A6H5JIP5_9PHAE (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIP5_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.660e-13 Identity = 32/61 (52.46%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 4 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHG 186
NK+SSF+RQLNLYG+RK+++G +AG YMHP F+RG+PE L +V++G P +++HG
Sbjct: 98 NKFSSFRRQLNLYGYRKVIKGPDAGAYMHPFFQRGRPELLGEVKKGKVPHYEMHGVNEIHG 158 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15593.3887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15593.3887.1 >prot_E-fasciculatus_F_contig15593.3887.1 ID=prot_E-fasciculatus_F_contig15593.3887.1|Name=mRNA_E-fasciculatus_F_contig15593.3887.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=429bp ENKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPback to top mRNA from alignment at E-fasciculatus_F_contig15593:1..2472- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15593.3887.1 ID=mRNA_E-fasciculatus_F_contig15593.3887.1|Name=mRNA_E-fasciculatus_F_contig15593.3887.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2472bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15593:1..2472- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15593:1..2472- >mRNA_E-fasciculatus_F_contig15593.3887.1 ID=mRNA_E-fasciculatus_F_contig15593.3887.1|Name=mRNA_E-fasciculatus_F_contig15593.3887.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2574bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15593:1..2472- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |