mRNA_E-fasciculatus_F_contig15590.3885.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15590.3885.1
Unique NamemRNA_E-fasciculatus_F_contig15590.3885.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: D8LSK0_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK0_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 6.940e-88
Identity = 125/132 (94.70%), Postives = 130/132 (98.48%), Query Frame = 1
Query:    1 EQYMLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVRW 396
            +QYMLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHL LNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRH+YFPSLRAGL+K MASGLCFLLSAVLHELLVSVPFHMV++
Sbjct:  202 DQYMLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHLTLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHIYFPSLRAGLSKSMASGLCFLLSAVLHELLVSVPFHMVKF 333          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: A0A836CDX9_9STRA (O-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.140e-55
Identity = 86/132 (65.15%), Postives = 106/132 (80.30%), Query Frame = 1
Query:    1 EQYMLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVRW 396
            EQY+LP +   +      ++L + E LL L +P+TYVWLL FY FFH++LNLLAE+  FGDRLFYRDWWNA TI +YWRLWNLPVHYWM+RH+YFP LRAG++K MAS LCF+LSAV HELL+SVPF MV++
Sbjct:  230 EQYILPALQTSFHPITRGDLLSTAETLLALCIPSTYVWLLIFYGFFHVLLNLLAEL--FGDRLFYRDWWNATTIEAYWRLWNLPVHYWMVRHMYFPCLRAGISKTMASVLCFVLSAVFHELLISVPFRMVKF 359          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: A0A7S2CUJ8_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CUJ8_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.960e-53
Identity = 77/131 (58.78%), Postives = 99/131 (75.57%), Query Frame = 1
Query:    1 EQYMLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVR 393
            +Q+++P +    + +    IL  + RLL L VP TY+WLLGFY  FHL LNL+AE+LRFGDR+FY+DWWNA T   YWRLWNLPVHYW++RH+YFP LR G ++  A+   FL SAV+HEL+VSVPFHM+R
Sbjct:   24 QQHVIPVIAIETEDNTCIPILQFLNRLLKLTVPVTYIWLLGFYLIFHLFLNLMAEILRFGDRIFYKDWWNATTFDQYWRLWNLPVHYWLVRHLYFPCLRYGFSRANAALAVFLFSAVMHELIVSVPFHMIR 154          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: A0A7S2S7G3_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7G3_9STRA)

HSP 1 Score: 175 bits (443), Expect = 9.930e-52
Identity = 78/132 (59.09%), Postives = 100/132 (75.76%), Query Frame = 1
Query:    1 EQYMLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVRW 396
            +Q+++P + +  D     +++  +ERL+ L +P TY+WLL FY FFHL LNL+ E+LRFGDR+FY+DWWNA T   YWRLWNLPVHYWM+RH+YFP LRAGL +  A  L F  SAV HELLVSVPFHM+R+
Sbjct:   96 QQHVVPIIEKATDPISRLDLVGILERLVKLTIPVTYLWLLMFYLFFHLFLNLIGELLRFGDRVFYKDWWNATTFEEYWRLWNLPVHYWMVRHLYFPLLRAGLGRTQAMLLVFTFSAVFHELLVSVPFHMLRF 227          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: A0A7S3XU69_HETAK (O-acyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU69_HETAK)

HSP 1 Score: 170 bits (430), Expect = 2.300e-48
Identity = 76/131 (58.02%), Postives = 97/131 (74.05%), Query Frame = 1
Query:    1 EQYMLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVR 393
            +QYMLP            N +  +ER+L +AVP+TY+WLLGFY FFHL +NLLAE+LRFGDR FY+DWWN+ +  +YWRLWN+PVH+W++RH YFP  R G  K +A+   F LSAVLHEL++SVPF MVR
Sbjct:  255 QQYMLPAAEHSVVHVVEGNYVRMVERVLVMAVPSTYIWLLGFYVFFHLYMNLLAELLRFGDREFYKDWWNSTSFEAYWRLWNMPVHHWIVRHAYFPLQRMGCGKNLATLGVFFLSAVLHELVISVPFKMVR 385          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: A0A7S0CEW1_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CEW1_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.380e-48
Identity = 74/128 (57.81%), Postives = 100/128 (78.12%), Query Frame = 1
Query:   28 EWYDSDPAANILVS--IERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRA-GLTKPMASGLCFLLSAVLHELLVSVPFHMVRWRS 402
            E  ++D AA + V      +L LA+ NTY WL+G Y FFHL LNLLAE+L+FGDR+FY+DWWN++ + SYWRLWN+PVHYW++RHVYFPS+R   ++K  AS + F +SAVLHE+++S+PFHM+RW S
Sbjct:  164 ESLEADEAAKLSVDDIFTFVLKLAIANTYCWLIGSYLFFHLYLNLLAEILQFGDRVFYKDWWNSSDVSSYWRLWNMPVHYWLVRHVYFPSIRRLHISKNTASFIVFFVSAVLHEIIISIPFHMIRWWS 291          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: A0A4P1QXU1_LUPAN (O-acyltransferase n=3 Tax=Lupinus TaxID=3869 RepID=A0A4P1QXU1_LUPAN)

HSP 1 Score: 170 bits (430), Expect = 7.110e-48
Identity = 78/132 (59.09%), Postives = 97/132 (73.48%), Query Frame = 1
Query:    1 EQYMLPTVHEWYDSDPA-ANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVR 393
            EQYM P V       P   NIL + ER+L L+VPN YVWL  FY FFHL LN+LAE+LRFGDR FY+DWWNA T+  YWR+WN+PVH WM+RH+YFP +R GL KP A+ + FL+SAV HEL +++P HM +
Sbjct:  318 EQYMNPIVQN--SQHPLKGNILYASERVLKLSVPNVYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEEYWRMWNMPVHKWMVRHIYFPCIRNGLPKPAATLIAFLVSAVFHELCIAIPCHMFK 447          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: DAT1C_SOYBN (Diacylglycerol O-acyltransferase 1C n=3 Tax=Glycine max TaxID=3847 RepID=DAT1C_SOYBN)

HSP 1 Score: 169 bits (429), Expect = 1.140e-47
Identity = 78/132 (59.09%), Postives = 98/132 (74.24%), Query Frame = 1
Query:    1 EQYMLPTVHEWYDSDPA-ANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVR 393
            EQYM P V     + P   N+L +IER+L L+VPN YVWL  FY FFHL LN+LAE++RFGDR FY+DWWNA T+  YWR+WN+PVH WM+RH+YFP LR G+ K  AS + FL+SAV HEL ++VP HM +
Sbjct:  326 EQYMNPIVQN--STHPLKGNLLYAIERILKLSVPNVYVWLCMFYCFFHLWLNILAELVRFGDREFYKDWWNAKTVEEYWRMWNMPVHKWMVRHIYFPCLRRGIPKGAASLIAFLVSAVFHELCIAVPCHMFK 455          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: A0A6A5P5F3_LUPAL (O-acyltransferase n=3 Tax=Lupinus TaxID=3869 RepID=A0A6A5P5F3_LUPAL)

HSP 1 Score: 169 bits (428), Expect = 1.470e-47
Identity = 78/132 (59.09%), Postives = 97/132 (73.48%), Query Frame = 1
Query:    1 EQYMLPTVHEWYDSDPA-ANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVR 393
            EQYM P V       P   N+L ++ER+L L+VPN YVWL  FY FFHL LN+LAE+LRFGDR FY+DWWNA T+  YWR+WN+PVH WM+RHVYFP +R GL+K  A  + FLLSAV HEL +++P HM +
Sbjct:  321 EQYMNPIVQN--SQHPLKGNLLYAMERVLKLSVPNVYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEDYWRMWNMPVHKWMVRHVYFPCIRIGLSKSAAIFIAFLLSAVFHELCIAIPCHMFK 450          
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Match: A0A7R9VM43_9CHLO (O-acyltransferase n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VM43_9CHLO)

HSP 1 Score: 170 bits (430), Expect = 1.980e-47
Identity = 77/131 (58.78%), Postives = 98/131 (74.81%), Query Frame = 1
Query:    4 QYMLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLTKPMASGLCFLLSAVLHELLVSVPFHMVRW 396
            QY+ P VH         + L   ER+L LA+PNTYVWL  FY+ FHL LN+LAE+LRFGDR FY+DWWNA+T+G YWRLWN+PVH W++RHVYFPS+R G +K ++  L F++SA  HELL+ VP HMVR+
Sbjct:  385 QYIFPAVHNSMRPLQEMDWLHLCERVLRLALPNTYVWLCMFYSLFHLWLNILAELLRFGDREFYKDWWNASTVGEYWRLWNMPVHKWLLRHVYFPSIRLGCSKMVSMVLVFVVSAFFHELLLGVPLHMVRF 515          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15590.3885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSK0_ECTSI6.940e-8894.70Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpu... [more]
A0A836CDX9_9STRA3.140e-5565.15O-acyltransferase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2CUJ8_9STRA1.960e-5358.78Diacylglycerol O-acyltransferase n=1 Tax=Dictyocha... [more]
A0A7S2S7G3_9STRA9.930e-5259.09Diacylglycerol O-acyltransferase n=1 Tax=Rhizochro... [more]
A0A7S3XU69_HETAK2.300e-4858.02O-acyltransferase n=1 Tax=Heterosigma akashiwo Tax... [more]
A0A7S0CEW1_9STRA2.380e-4857.81Diacylglycerol O-acyltransferase n=1 Tax=Proboscia... [more]
A0A4P1QXU1_LUPAN7.110e-4859.09O-acyltransferase n=3 Tax=Lupinus TaxID=3869 RepID... [more]
DAT1C_SOYBN1.140e-4759.09Diacylglycerol O-acyltransferase 1C n=3 Tax=Glycin... [more]
A0A6A5P5F3_LUPAL1.470e-4759.09O-acyltransferase n=3 Tax=Lupinus TaxID=3869 RepID... [more]
A0A7R9VM43_9CHLO1.980e-4758.78O-acyltransferase n=1 Tax=Chlamydomonas euryale Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15590contigE-fasciculatus_F_contig15590:418..2050 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score164.1
Seed ortholog evalue4.6e-38
Seed eggNOG ortholog3847.GLYMA09G07520.2
Preferred nameDGAT
KEGG rclassRC00004,RC00041
KEGG koko:K11155
KEGG ReactionR02251,R02366,R02367,R08381
KEGG Pathwayko00561,ko00830,ko01100,ko04975,map00561,map00830,map01100,map04975
KEGG ModuleM00089
GOsGO:0000003,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0004144,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005975,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006950,GO:0006970,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0009058,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009536,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0010029,GO:0010030,GO:0010033,GO:0010154,GO:0012505,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019432,GO:0022414,GO:0031967,GO:0031975,GO:0031984,GO:0032501,GO:0032502,GO:0033993,GO:0034284,GO:0042175,GO:0042221,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0045995,GO:0046460,GO:0046463,GO:0046486,GO:0048316,GO:0048518,GO:0048580,GO:0048582,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050896,GO:0051094,GO:0051239,GO:0051240,GO:0061458,GO:0065007,GO:0071704,GO:0097305,GO:0098827,GO:1900140,GO:1901576,GO:1901700,GO:2000026
EggNOG free text desc.O-acyltransferase
EggNOG OGs37KI3@33090,3GEXH@35493,4JIZH@91835,COG5056@1,KOG0380@2759
EC2.3.1.20,2.3.1.75,2.3.1.76
COG Functional cat.I
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size417
Cds size408
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15590.3885.1prot_E-fasciculatus_F_contig15590.3885.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15590 427..2050 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928031.9651852-UTR-E-fasciculatus_F_contig15590:417..4261622928031.9651852-UTR-E-fasciculatus_F_contig15590:417..426Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15590 418..426 +
1695995796.0718496-UTR-E-fasciculatus_F_contig15590:417..4261695995796.0718496-UTR-E-fasciculatus_F_contig15590:417..426Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15590 418..426 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928031.9791408-CDS-E-fasciculatus_F_contig15590:426..5821622928031.9791408-CDS-E-fasciculatus_F_contig15590:426..582Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15590 427..582 +
1695995796.0869408-CDS-E-fasciculatus_F_contig15590:426..5821695995796.0869408-CDS-E-fasciculatus_F_contig15590:426..582Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15590 427..582 +
1622928031.991387-CDS-E-fasciculatus_F_contig15590:1302..14041622928031.991387-CDS-E-fasciculatus_F_contig15590:1302..1404Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15590 1303..1404 +
1695995796.1085713-CDS-E-fasciculatus_F_contig15590:1302..14041695995796.1085713-CDS-E-fasciculatus_F_contig15590:1302..1404Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15590 1303..1404 +
1622928032.002574-CDS-E-fasciculatus_F_contig15590:1900..20501622928032.002574-CDS-E-fasciculatus_F_contig15590:1900..2050Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15590 1901..2050 +
1695995796.1296606-CDS-E-fasciculatus_F_contig15590:1900..20501695995796.1296606-CDS-E-fasciculatus_F_contig15590:1900..2050Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15590 1901..2050 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15590.3885.1

>prot_E-fasciculatus_F_contig15590.3885.1 ID=prot_E-fasciculatus_F_contig15590.3885.1|Name=mRNA_E-fasciculatus_F_contig15590.3885.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=136bp
MLPTVHEWYDSDPAANILVSIERLLTLAVPNTYVWLLGFYAFFHLVLNLL
AEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHVYFPSLRAGLT
KPMASGLCFLLSAVLHELLVSVPFHMVRWRSTARR*
back to top

mRNA from alignment at E-fasciculatus_F_contig15590:418..2050+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15590.3885.1 ID=mRNA_E-fasciculatus_F_contig15590.3885.1|Name=mRNA_E-fasciculatus_F_contig15590.3885.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1633bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15590:418..2050+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAGCAGTACATGCTTCCCACCGTGCACGAGTGGTACGACTCCGACCCCGC CGCCAACATCCTCGTCTCGATCGAGCGCCTGCTGACTCTCGCCGTGCCGA ACACCTACGTCTGGCTGCTGGGGTTCTACGCCTTCTTCCACCTTGTCCTC AATCTCTTGGCCGAGGTGTGTTCGCTTGGCATGCATCCCGGACGGCATAC ACACAAGCCGCGTGCTTGCGTTTTTTTTTTGCTACAGCTCCGACAACGAA CTGAATATGCGTTCTTTTTTTGCGACAGCCCCGACAACTAACTGAATATT TAGTAGTCCCCAGCGGTGTGAATACAAAAAATAAAAAAAGGTGTGAGTAT GTTGGCTCGCCGGTTTTGTCAGGGCTCCTCTTGTGTCTGGAATTGATATT GGTCGTGGTACAACTTGTGTGGTATGGAGTATGCATGCGCATCCCGGAAG AATGCCGGTGCGGAGATTTTTTTTCTTCACAGAATGTGAATTCCAAAAGG GATCTCTCCGGAATGGGCTCATAAGCGCAAACAGTGCCATCAAGGGGTGA TGTAAGATGACAAGTAAAAGGCAGCAGCGGGACCAGCCCAGCTGCAAGCT GCCCGTTGTGACGCTTCCCAAGCTCAACAGCCCACATGGCATGGCTGGTG TGCTTCGGAGTCGAAAGGGCCCATCTATCCAACCTCTACAACCTAAACAA GATAGATATGTGTGTTCAGTCGTTATTGTGTCGTGACGTTTCTTGTGCTT TTCTGCGGGCCTCAATTCCTGCATTTACTTCTGTACACAGTCATGATTGC TGTGTGGTCGTGGCGTGTCTTCTGTGTTTCTGTGGGCCTCAACTGCTGAA CTGCTTTCCTCCGTTTTTTTTTTCGTTTTTTCCAGGTATTGAGGTTCGGT GACCGGCTCTTTTATCGGGACTGGTGGAATGCGAATACCATCGGGTCGTA CTGGCGGCTATGGAACCTTCCGGTGCATTACTGGATGGTGAGCGGGAGCA TCAAACAGTGTCGTGTCACCCCCATCGTTTAAGTGAAGACGGAGGTCGGG GGTCACGAAGATTTTGCTGCTGGGTTTGGTCTTGAGCTGAGGCACAAGCG CATACCCACCCCCTACGCTCACACTTGTGCTCGTCACGATGCACGTACAT GCTTTTGTATTCTCTGAGTCCCATTGCTCATCGTCACCCAAACAGCACTC GACCGAGTGCAATCCTCTGCTGTTGACTGTGCACCCGCCTGCGGTATCTT CGCAGCAGCTGCGGGCATTGCCGCCGCTGCACGAACACCTCACCCAGGGG GATTAATTCCTCACCTTCGTGAATTAAGCCAGCGCCAGTTTTCCCATGAC TGGGTTGCCCTGTGCCTGACGCTTTTTCTCACGGCTCCGAAGCAACGCAT GCTTACATCCTCGATGCTGTTTTCCGGTCCCTTCCCGCGACAACACGCGC GCTTCCTCCGTGGCTTACGACAAATAATCCAAGATCCGTCACGTCTACTT CCCTTCCCTGCGTGCGGGTCTGACCAAGCCCATGGCTTCGGGGCTGTGCT TCTTGCTCTCGGCGGTGTTGCACGAGCTGCTGGTCTCGGTGCCCTTTCAC ATGGTGAGATGGCGATCTACGGCAAGACGATGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15590:418..2050+

>mRNA_E-fasciculatus_F_contig15590.3885.1 ID=mRNA_E-fasciculatus_F_contig15590.3885.1|Name=mRNA_E-fasciculatus_F_contig15590.3885.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=816bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15590:418..2050+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTTCCCACCGTGCACGAGTGGTACGACTCCGACCCCGCCGCCAACAT
CCTCGTCTCGATCGAGCGCCTGCTGACTCTCGCCGTGCCGAACACCTACG
TCTGGCTGCTGGGGTTCTACGCCTTCTTCCACCTTGTCCTCAATCTCTTG
GCCGAGATGCTTCCCACCGTGCACGAGTGGTACGACTCCGACCCCGCCGC
CAACATCCTCGTCTCGATCGAGCGCCTGCTGACTCTCGCCGTGCCGAACA
CCTACGTCTGGCTGCTGGGGTTCTACGCCTTCTTCCACCTTGTCCTCAAT
CTCTTGGCCGAGGTATTGAGGTTCGGTGACCGGCTCTTTTATCGGGACTG
GTGGAATGCGAATACCATCGGGTCGTACTGGCGGCTATGGAACCTTCCGG
TGCATTACTGGATGGTATTGAGGTTCGGTGACCGGCTCTTTTATCGGGAC
TGGTGGAATGCGAATACCATCGGGTCGTACTGGCGGCTATGGAACCTTCC
GGTGCATTACTGGATGATCCGTCACGTCTACTTCCCTTCCCTGCGTGCGG
GTCTGACCAAGCCCATGGCTTCGGGGCTGTGCTTCTTGCTCTCGGCGGTG
TTGCACGAGCTGCTGGTCTCGGTGCCCTTTCACATGGTGAGATGGCGATC
TACGGCAAGACGATGAATCCGTCACGTCTACTTCCCTTCCCTGCGTGCGG
GTCTGACCAAGCCCATGGCTTCGGGGCTGTGCTTCTTGCTCTCGGCGGTG
TTGCACGAGCTGCTGGTCTCGGTGCCCTTTCACATGGTGAGATGGCGATC
TACGGCAAGACGATGA
back to top