mRNA_E-fasciculatus_F_contig15565.3873.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: D8LMK8_ECTSI (Heat shock protein 33 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK8_ECTSI) HSP 1 Score: 323 bits (829), Expect = 3.890e-108 Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 1
Query: 1 QVELPLKDNGNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
+VELPLKDNGNQ+VAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEK EV
Sbjct: 215 KVELPLKDNGNQDVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEV 381
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: A0A6H5KBS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS9_9PHAE) HSP 1 Score: 322 bits (824), Expect = 6.410e-104 Identity = 163/167 (97.60%), Postives = 165/167 (98.80%), Query Frame = 1
Query: 1 QVELPLKDNGNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
+VELPLKDNGNQ+VAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEK VINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEK EV
Sbjct: 503 KVELPLKDNGNQDVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKAVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEV 669
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: A0A836CL44_9STRA (Heat shock protein Hsp33 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL44_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.570e-54 Identity = 90/156 (57.69%), Postives = 119/156 (76.28%), Query Frame = 1
Query: 37 NVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQK-SCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
+V+ GIG+G+LKVVRNHPDY+RPY+GI L+ +VAYD A YL +S+Q S AI AG V ALVRQAGGY++ETLP ASEET K +N+A+L+A+ DP+ L+ GMTP +I E+LLEG+GG+ ++T +PE+ CHCS ERV+ AL+LL EV
Sbjct: 130 DVSVGIGKGVLKVVRNHPDYERPYSGIVELRNSQVAYDVAGYLRDSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEV 285
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: A0A448ZMK1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMK1_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.220e-36 Identity = 70/161 (43.48%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 28 GNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSD---PSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
G+ + + +G+G+++VV+NHPD+ PY GITA++ G++ D +YLAESEQ+SCA+AAG V L AGGY++E LP A+ ET V N+ KL+ + P+ L+ +G+TP+ I E++L+GLG V + PEF C CS +R+ AL+L+ ++EV
Sbjct: 193 GDIELPEAVGKGMVQVVKNHPDWNNPYNGITAIRHGDIDRDIGAYLAESEQRSCALAAGISVNGILCTAAGGYLIEQLPNATPETLSRVEKNLGKLVEKDGGNKLPTGLLLKGVTPLEIAETILDGLGMV-PLQQISPEFECKCSSDRLIRALRLIPRSEV 352
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: A0A6V2EEP6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EEP6_9STRA) HSP 1 Score: 138 bits (348), Expect = 3.070e-36 Identity = 69/161 (42.86%), Postives = 105/161 (65.22%), Query Frame = 1
Query: 28 GNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSD---PSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
G+ ++ + +G+G + VV+NHPD+ PY GITA++ G++ D YLAESEQ+SCA+AA V L AGGY++E LP+ SEET K V N+A L+ + P+ L+ G+TP+ I E +L+GL + + P+ CHC++ER++ A++LL K EV
Sbjct: 193 GSMSLQEAVGKGTVNVVKNHPDWPNPYNGITAIRDGDIDRDIGIYLAESEQRSCALAAATTVNGILCTSAGGYLVEQLPDCSEETMKRVETNLATLVEKDGTDKLPTGLLNTGVTPLEIAEIILDGLD-MKPLQQIEPKAACHCTEERLFRAVRLLPKEEV 352
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: A0A1E7EWZ2_9STRA (Hsp33 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWZ2_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.460e-34 Identity = 66/161 (40.99%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 28 GNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSD---PSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
G+ + + +G+G+++VV+NHPD+ PY GIT+++ G++ D +YLAESEQ+SCA+AA + L AGGY++E LP A+ ET V N+A L+ + P++L+ G+TP+ I E++L+GLG V + P+F C CS +R+ AL+L+ + EV
Sbjct: 169 GDIELPEALGQGMVQVVKNHPDWSNPYNGITSIRHGDIDRDIGAYLAESEQRSCALAAATSINGILCTAAGGYLIEQLPNATPETLARVEKNLATLVEKDGSDKLPANLLLNGVTPLEIAETILDGLGMV-PLQQISPKFQCSCSSDRLIRALRLIPRKEV 328
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: A0A7S2K1F7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1F7_9STRA) HSP 1 Score: 125 bits (314), Expect = 5.600e-33 Identity = 64/157 (40.76%), Postives = 104/157 (66.24%), Query Frame = 1
Query: 46 QGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARS---SDPSDLMGRGMTPISIVESLLEGLG--GVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
+ +G+G ++VV+ HPD+ PY GITA++ G + D SYLAESEQ+SCA+AA + L AGGY++E LP+ E+ KTV N+ K++A+ S P++L+ G +P++I + +LEGLG +G++T P C C++ER+ +++LL + +V
Sbjct: 14 EAVGKGSVQVVKMHPDWPNPYNGITAIRNGNIDLDIGSYLAESEQRSCALAAATTINGILCTAAGGYLVEQLPDCDEDVMKTVEANLEKVVAKDGGQSVPTNLLLAGASPLNIADQVLEGLGMKPLGSLT---PGITCKCNEERLIRSVRLLPEKDV 167
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: B5Y5I8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5I8_PHATC) HSP 1 Score: 128 bits (321), Expect = 1.490e-32 Identity = 63/161 (39.13%), Postives = 103/161 (63.98%), Query Frame = 1
Query: 28 GNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSD---PSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
G ++ +G+G +++V+NHPD+ RPY GITA++ G++ D YLAESEQ+SCA+AA + L AGGY++E LP ET V N+AKL+ + P++L+ G+TP+ + +L+GL + + +P +CHC+++R++ +L+LL K EV
Sbjct: 159 GEMSLTDAVGKGSVQIVKNHPDWPRPYNGITAIRHGDIDRDIGIYLAESEQRSCALAAATAMNGILCTAAGGYLIEQLPGVEPETIARVEQNLAKLVQKDGGDELPANLLLSGVTPLDMAAIILDGLD-MQPLQQIKPGLVCHCTEDRLFRSLRLLSKEEV 318
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: A0A7S1ZBL5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBL5_TRICV) HSP 1 Score: 129 bits (323), Expect = 4.960e-32 Identity = 70/169 (41.42%), Postives = 107/169 (63.31%), Query Frame = 1
Query: 7 ELPLKDNGNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSD----PSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
++PLK+ +G+G++KVV+NHP + PY GI+A+ ++ D YLAESEQ+SCA+AA V+ L + AGGY++E LP+ +ET +TV N+A+L+ R P+ L+ G+TP+ I E +LEGLG + + P C CS+ER+ +L+LL +AEV
Sbjct: 290 DIPLKE--------AVGKGVIKVVKNHPTWPNPYNGISAMSYMDIDRDVGIYLAESEQRSCALAAATSVSGILCKAAGGYLVERLPDCPDETMRTVEVNLARLVERDGTTDAVPTGLLLDGVTPLEIAEVVLEGLG-MEPLQQIEPRAKCRCSEERLLRSLRLLPRAEV 449
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Match: A0A1Z5JWD9_FISSO (Molecular chaperone Hsp33 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWD9_FISSO) HSP 1 Score: 123 bits (309), Expect = 8.780e-31 Identity = 62/161 (38.51%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 28 GNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSD---PSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKAEV 501
G ++ + +G+G ++VV+NHPD+ RPY GITA++ G++ D YLAESEQ+SCA+AA V L AGGY++E LP + K V N+A+L+ P+ L+ +G TP+ I ++L+GL + + P +C C+++R+ +L+LL + EV
Sbjct: 165 GEMSLPEAVGKGSVQVVKNHPDWPRPYNGITAIRHGDIDRDVGIYLAESEQRSCALAAAVSVKGILCTSAGGYLIEQLPGVEPDVVKQVEKNLAQLVEMDGTGNLPTGLLLQGQTPVDIAATILDGLD-MKPLQQMEPVLVCQCTEDRLMRSLRLLPREEV 324 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15565.3873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15565.3873.1 >prot_E-fasciculatus_F_contig15565.3873.1 ID=prot_E-fasciculatus_F_contig15565.3873.1|Name=mRNA_E-fasciculatus_F_contig15565.3873.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=167bp QVELPLKDNGNQNVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDback to top mRNA from alignment at E-fasciculatus_F_contig15565:893..2948+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15565.3873.1 ID=mRNA_E-fasciculatus_F_contig15565.3873.1|Name=mRNA_E-fasciculatus_F_contig15565.3873.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2056bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15565:893..2948+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15565:893..2948+ >mRNA_E-fasciculatus_F_contig15565.3873.1 ID=mRNA_E-fasciculatus_F_contig15565.3873.1|Name=mRNA_E-fasciculatus_F_contig15565.3873.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1002bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15565:893..2948+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |