mRNA_E-fasciculatus_F_contig15550.3864.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: D8LJC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC2_ECTSI) HSP 1 Score: 216 bits (550), Expect = 5.990e-67 Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 1
Query: 1 FQVLEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAPSSQDTLPG 324
+QVLEEALHVTAGSGTGVAA GNPAYVLSRLSVLSEDDFMSAF+YAGGGGYPA RDWA DLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAPSSQD LPG
Sbjct: 246 YQVLEEALHVTAGSGTGVAAGGNPAYVLSRLSVLSEDDFMSAFDYAGGGGYPAGRDWAADLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAPSSQDALPG 353
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: A0A6H5KZ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ36_9PHAE) HSP 1 Score: 211 bits (537), Expect = 5.900e-63 Identity = 100/106 (94.34%), Postives = 101/106 (95.28%), Query Frame = 1
Query: 7 VLEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAPSSQDTLPG 324
VLEEALHVTAGSGTG AA GNPAYVLSRLSVLSEDDFMSAF+YAGGGGYPA RDWA DLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAPSSQD LPG
Sbjct: 478 VLEEALHVTAGSGTGFAAGGNPAYVLSRLSVLSEDDFMSAFDYAGGGGYPAGRDWAADLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAPSSQDALPG 583
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: K3X6G3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6G3_GLOUD) HSP 1 Score: 70.5 bits (171), Expect = 6.430e-12 Identity = 32/97 (32.99%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 10 LEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAP 300
++ L+V + T ++ YVL RL +LS+D + + ++ G + ++W+ LP+DA I+M +F C D +LP D E DRPF + +F+ + P
Sbjct: 353 FDKYLNVGDPNSTEYSSLERQQYVLERLIMLSKDRSLDRYRWSKGSTWKG-KEWSDSLPSDAEILMNVFCCMMDNMLPADSERDRPFWKSYFLSKGP 448
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: A0A8K1FML5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FML5_PYTOL) HSP 1 Score: 70.1 bits (170), Expect = 8.790e-12 Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 10 LEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAP 300
E+ L+V +G ++ YVL RL +LS+D + F + G + ++W LP+DA I+M +F C D LLP D DRPF + +F+ +AP
Sbjct: 357 FEKYLNVGDATGAEYSSLERQQYVLERLIMLSKDRNLDRFRWNKGSTWKG-KEWTEALPSDAEILMNVFSCILDNLLPADTGRDRPFWKSYFMGKAP 452
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: A0A5D6XQQ7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQQ7_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.630e-11 Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 10 LEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDRAP 300
++ L+V + T ++ YVL RL +LS+D + + + G + ++W+ LP+DA ++M +F C D +LP D E DRPF + +F+ + P
Sbjct: 346 FDKYLNVGDPNSTEYSSLERQQYVLERLIMLSKDRSLDRYRWNKGSAWKG-KEWSESLPSDAEVLMNVFCCMMDNMLPADSERDRPFWKSYFLGKGP 441
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: A0A024G5M2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5M2_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.040e-11 Identity = 34/95 (35.79%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 10 LEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDR 294
E+ L V S T + YVL RL +LS+D ++ + + G + + W LP+DA I+M +F C D LLP D E DRPF + +F+++
Sbjct: 344 FEKYLKVGDPSSTEYVSLDRQQYVLERLILLSKDRNLNRYRWKSGFSWKG-KQWTESLPSDAEILMNVFCCMLDNLLPADNERDRPFWKSYFLNK 437
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: F0WVF4_9STRA (Uncharacterized protein AlNc14C295G10296 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WVF4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.690e-10 Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 1
Query: 10 LEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPRDWEEDRPFARQFFVDR 294
E+ L V S T A+ YVL RL +LS+D ++ + + G + + W LP+D I+M +F C D LLP D E DR F + +F+++
Sbjct: 345 FEKYLKVGDPSSTAYASLDRQQYVLERLILLSKDRNLNRYRWNSGFSWKG-KQWTESLPSDTEILMNVFCCMLDNLLPADNERDRSFWKSYFLNK 438
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: A0A835YPT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT6_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 9.420e-9 Identity = 38/105 (36.19%), Postives = 56/105 (53.33%), Query Frame = 1
Query: 1 FQVLEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLL---PRDWEEDRPFARQFFVDRAPSS 306
+Q LE L V+A +P YV RL L+ D + + GGG + A W+P LPTDA +VM +FVC ++LL P + + PFA +F+ D P++
Sbjct: 135 YQDLERVLLVSA----------DPGYVYERLQQLAADAQLGGVRWDGGGAH-AGAPWSPALPTDAELVMHVFVCRCNELLARTPAERLDGAPFASRFY-DEVPAA 227
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: UPI0014028707 (transmembrane protein 209 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014028707) HSP 1 Score: 61.2 bits (147), Expect = 1.130e-8 Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = 1
Query: 67 NPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPRD--WEEDRPFARQFFVDRAPSSQDT 315
N Y++ R+ L+ MS+F + GGG Y SR W DLPTD+AI+M++F D LP + + + F Q F+ + P DT
Sbjct: 403 NQEYLVERIKELAHGGCMSSFRWNGGGDYK-SRKWDTDLPTDSAIIMRMFCTYLDSRLPPHPKYPDGKTFTSQHFI-QTPDKPDT 485
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Match: A0A1B6FSW8_9HEMI (Uncharacterized protein n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6FSW8_9HEMI) HSP 1 Score: 55.5 bits (132), Expect = 1.200e-6 Identity = 28/75 (37.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 67 NPAYVLSRLSVLSEDDFMSAFEYAGGGGYPASRDWAPDLPTDAAIVMKLFVCCSDKLLPR-DWEEDRPFARQFFV 288
N Y++SR+ L+ MS + + GGG + ++WAP LPTDAA+V+ L D LP+ + RPF+ V
Sbjct: 370 NQEYLVSRIKELARGGCMSEYRWNGGGVW-GGKEWAPPLPTDAALVLHLLATYLDCQLPQTSLPDSRPFSSHHLV 443 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15550.3864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15550.3864.1 >prot_E-fasciculatus_F_contig15550.3864.1 ID=prot_E-fasciculatus_F_contig15550.3864.1|Name=mRNA_E-fasciculatus_F_contig15550.3864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=108bp FQVLEEALHVTAGSGTGVAAWGNPAYVLSRLSVLSEDDFMSAFEYAGGGGback to top mRNA from alignment at E-fasciculatus_F_contig15550:1852..2995+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15550.3864.1 ID=mRNA_E-fasciculatus_F_contig15550.3864.1|Name=mRNA_E-fasciculatus_F_contig15550.3864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1144bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15550:1852..2995+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15550:1852..2995+ >mRNA_E-fasciculatus_F_contig15550.3864.1 ID=mRNA_E-fasciculatus_F_contig15550.3864.1|Name=mRNA_E-fasciculatus_F_contig15550.3864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=648bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15550:1852..2995+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |