prot_E-fasciculatus_F_contig15541.3857.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15541.3857.1
Unique Nameprot_E-fasciculatus_F_contig15541.3857.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length295
Homology
BLAST of mRNA_E-fasciculatus_F_contig15541.3857.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 1.980e-126
Identity = 267/310 (86.13%), Postives = 273/310 (88.06%), Query Frame = 0
Query:    1 GRVSGEVAVRIVCIDKPLREGAEDEVVGELLIPVSRLPQNEPVEQWYGLEPPVGSGKTFTKAALLLRFLFTSXXXXXXXXXXXXXXXXXXXAGKGD--APAAGLRQSV------EDGA--VGGSRAGSPGAGAXXXXXXXXXXSDSFRQALLMAGVTPDG----GSNADSAGVRKKTDFPGGGGAKRGDEFSVDSSIDPFGADEIE-GDEYLGGGGGDDADGARAAQRGELSLLQSQQQLQLGTWGSSNVGTAVLPGATAAEAALALSTDEVLPAGLVDYFLVVGPAANEEGKLKVADYADCGFGSSGAT 295
            GRVSGEVAVRIVCIDKPLREGAEDEVVGELLIPVSRLPQNEPVEQWYGLEPPVGSGKTFTKAALLLRFLFTSXXXXXXXXXXXXXXXXXX   KGD  AP    RQSV      EDGA  VGGSRAGSPG   XXXXXXXX  ++SFRQALLMAGVTP+G    GSNADSAGVR+ T FPGGGGAKRGDEFSVD SIDPFGADEIE GDEYLGGGG DD+  ARAA RGELSLL SQQQLQLG+WG SNVGTAVLPG TAAEAALALSTDEVLPAGLVDYFLVVGPAANEEGKLKVADYADCGFGSSGAT
Sbjct:  134 GRVSGEVAVRIVCIDKPLREGAEDEVVGELLIPVSRLPQNEPVEQWYGLEPPVGSGKTFTKAALLLRFLFTSXXXXXXXXXXXXXXXXXX---KGDSAAPVGSQRQSVAALAQAEDGAAGVGGSRAGSPGXXXXXXXXXXXAGNESFRQALLMAGVTPEGAGGGGSNADSAGVRR-TGFPGGGGAKRGDEFSVDPSIDPFGADEIEEGDEYLGGGG-DDSQVARAAHRGELSLLHSQQQLQLGSWGGSNVGTAVLPGTTAAEAALALSTDEVLPAGLVDYFLVVGPAANEEGKLKVADYADCGFGSSGAT 438          
BLAST of mRNA_E-fasciculatus_F_contig15541.3857.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 4.770e-110
Identity = 230/296 (77.70%), Postives = 240/296 (81.08%), Query Frame = 0
Query:   14 IDKPLREGAEDEVVGELLIPVSRLPQNEPVEQWYGLEPPVGSGKTFTKAALLLRFLFTSXXXXXXXXXXXXXXXXXXXAGKG--DAPAAGLRQSV------EDGA--VGGSRAGSPGAGAXXXXXXXXXXSDSFRQALLMAGVTPDG----GSNADSAGVRKKTDFPGGGGAKRGDEFSVDSSIDPFGADEIEGDEYLGGGGGDDADGARAAQRGELSLLQSQQQLQLGTWGSSNVGTAVLPGATAAEAALALSTDEVLPAGLVDYFLVVGPAANEEGKLKVADYADCGFGSSGAT 295
            + +PLREGAEDEVVGELLIPVSRLPQNEPVEQWYGLEPPVGSGKTFTKAALLLRFLFTSXXXXXXXXXXXX       AGKG   AP    RQSV      EDGA  VGGSRAG P   A          ++SFRQALLMAGVTP+G    GSNA+SAGVR+ TDFPGG GAKRGD+FSVDSSIDPFGADEIEGDE LGGG    ++ ARAAQRGELSLL SQ QLQLGTWG SNVGTAVLP    AEAALALSTDEVLPAGLVDYFLVVGPAANEEGKLKVADYADCGFGSSGAT
Sbjct:   37 VKQPLREGAEDEVVGELLIPVSRLPQNEPVEQWYGLEPPVGSGKTFTKAALLLRFLFTSXXXXXXXXXXXXG------AGKGVIAAPTGSQRQSVAVPPQAEDGAAGVGGSRAGPPWGVAGAGKPGLGAGNESFRQALLMAGVTPEGAGGGGSNANSAGVRR-TDFPGGRGAKRGDDFSVDSSIDPFGADEIEGDECLGGGXXX-SEAARAAQRGELSLLHSQHQLQLGTWGGSNVGTAVLP---VAEAALALSTDEVLPAGLVDYFLVVGPAANEEGKLKVADYADCGFGSSGAT 321          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15541.3857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB83_ECTSI1.980e-12686.13WD-40 repeat protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KB05_9PHAE4.770e-11077.70UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15541contigE-fasciculatus_F_contig15541:627..2984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15541.3857.1mRNA_E-fasciculatus_F_contig15541.3857.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15541 627..2986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15541.3857.1 ID=prot_E-fasciculatus_F_contig15541.3857.1|Name=mRNA_E-fasciculatus_F_contig15541.3857.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=295bp
GRVSGEVAVRIVCIDKPLREGAEDEVVGELLIPVSRLPQNEPVEQWYGLE
PPVGSGKTFTKAALLLRFLFTSSSSPDAAAAAAAAAATAGGAGKGDAPAA
GLRQSVEDGAVGGSRAGSPGAGAGAGKPGLGAGSDSFRQALLMAGVTPDG
GSNADSAGVRKKTDFPGGGGAKRGDEFSVDSSIDPFGADEIEGDEYLGGG
GGDDADGARAAQRGELSLLQSQQQLQLGTWGSSNVGTAVLPGATAAEAAL
ALSTDEVLPAGLVDYFLVVGPAANEEGKLKVADYADCGFGSSGAT
back to top