prot_E-fasciculatus_F_contig1554.3856.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1554.3856.1
Unique Nameprot_E-fasciculatus_F_contig1554.3856.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length690
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1554.3856.1 vs. uniprot
Match: D7FWA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWA7_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 1.570e-84
Identity = 140/188 (74.47%), Postives = 160/188 (85.11%), Query Frame = 0 
Query:  465 VATGSWWVL--QGPLSVPCGRASLASGEGPITVGQCLESEGGSRYLGWVPGMAWKARLTVTEDGAVYSGSDGQEVPFSAVLGEKKN-------GDDSGQEG--GMLCSAERMVRRAVPFVGTAEHRARMRGKSLVVGGGIFCHTHATPRPPPKSVLDALFRGRGGGIAIFSEHTGDLQVVNSRGEVVW 641
            VA G+W VL  QGPLSVPCGR SLASGEGP+ VG+C+ESEGGSRYLGWVPG++WKARLTVT+DGAVYSG+DG+EVPFSAVLG+  +       GD +GQ+G  GMLCSAER+VRRAVPF+G  EHRARMRG+ LVVG G FC TH TPR PP+SV+DALFRGRGGG+A FSEHTGDL VVNSRG+VVW
Sbjct:  261 VAVGTWPVLLLQGPLSVPCGRTSLASGEGPMAVGECVESEGGSRYLGWVPGVSWKARLTVTDDGAVYSGTDGKEVPFSAVLGKGMSSNGGDGGGDGNGQDGAGGMLCSAERLVRRAVPFIGDFEHRARMRGEKLVVGRGFFCRTHETPRRPPRSVIDALFRGRGGGVASFSEHTGDLHVVNSRGKVVW 448
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BLAST of mRNA_E-fasciculatus_F_contig1554.3856.1 vs. uniprot
Match: A0A6H5JF69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF69_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 1.590e-84
Identity = 164/246 (66.67%), Postives = 187/246 (76.02%), Query Frame = 0 
Query:  464 VVATGSWWVL--QGPLSVPCGRASLASGEGPITVGQCLESEGGSRYLGWVPGMAWKARLTVTEDGAVYSGSDGQEVPFSAVLGEKKNGDDS-------GQEG--GMLCSAERMVRRAVPFVGTAEHRARMRGKSLVVGGGIFCHTHATPRPPPKSVLDALFRGRGGGIAIFSEHTGDLQVVNSRGEVVWSVGDNTS---------SXXXXXXXXXXNPAEGRARWWRRGWGKKKKRDGSEKTGGWG 689
            VVA G+W VL  QGPLSVPCGR SLASGEGP+ VG+C+ESEGGSRYLGWVPG++WKARLTVT DGAVYSG+DG+EVPFSAVLG+  +GD         GQ+G  GM CS ER+VRRA+P +G  +H ARM G+ LVVG G FC THATPRPPP+SV+DALFRGRGGG+A FSEHTGDL VVNSRG+V WS GD+ S          XXXXXXXXXX       RWWRRGWGKK   D +E+T  WG
Sbjct:  621 VVAVGTWSVLLLQGPLSVPCGRTSLASGEGPMAVGECIESEGGSRYLGWVPGVSWKARLTVTTDGAVYSGTDGKEVPFSAVLGKDLSGDGGDGXXXXXGQDGARGMFCSMERLVRRALPIIGDFDHHARMSGERLVVGRGFFCRTHATPRPPPRSVIDALFRGRGGGVASFSEHTGDLHVVNSRGKVEWSAGDDVSIISDSAGSTXXXXXXXXXXXXXXXXXXRWWRRGWGKK---DLAEETSSWG 863
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BLAST of mRNA_E-fasciculatus_F_contig1554.3856.1 vs. uniprot
Match: D8LF92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF92_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 9.960e-79
Identity = 138/192 (71.88%), Postives = 157/192 (81.77%), Query Frame = 0 
Query:  465 VATGSWWVL--QGPLSVPCGRASLASGEGPITVGQCLESEGGSRYLGWVPGMAWKARLTVTEDGAVYSGSDGQEVPFSAVLGEKKNGDDSGQE---------GGMLCSAERMVRRAVPFVGTAEHRARMRGKSLVVGGGIFCHTHATPRPPPKSVLDALFRGRGGGIAIFSEHTGDLQVVNSRGEVVWSVGD 645
            VA G+W VL  QGPLSVPCGR SLASGEGP+ VG+C+ESEGGSRYLGWVPG++WKARLTVT+DGAVYSG+DG+EVPFSAVLG+  +G+              GGMLCSAER+VRRAVPF+G  EHRARMRG+ LVVG G FC TH TPR PP+SV+DALFRGRGGG+A FSEHTGDL VVNSRG+VVW   D
Sbjct:  724 VAVGTWPVLLLQGPLSVPCGRTSLASGEGPMAVGECVESEGGSRYLGWVPGVSWKARLTVTDDGAVYSGTDGKEVPFSAVLGKDLSGNGGDXXXXXXXQDGAGGMLCSAERLVRRAVPFIGDFEHRARMRGEKLVVGRGFFCRTHETPRRPPRSVIDALFRGRGGGVASFSEHTGDLHVVNSRGKVVWEGND 915
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BLAST of mRNA_E-fasciculatus_F_contig1554.3856.1 vs. uniprot
Match: A0A6H5K441_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K441_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 7.600e-5
Identity = 50/122 (40.98%), Postives = 54/122 (44.26%), Query Frame = 0 
Query:   24 AEATSPRCEVAELDSGAGPVPQGRGMARGDRVHLRSAQDGGQGGGGRMANRGGRGMGVDAAGPMGQVAWNXXXXXXXXXXXXXXXXXXX--PGVVLRALAEIAPLAEIAGRGNWSNAWHHGV 143
            AEAT PRCEVA  +            A GDR H +SAQ G  G GG  ANRGG  MGVDAAGPM +                         PGV  RALA I       G G WS+    GV
Sbjct:  162 AEATYPRCEVAGHEFPPTLFRANAVAAHGDRGHFQSAQGGSHGLGGGTANRGGPDMGVDAAGPMARAGRTGYPARGFGVEGAAVTPNTTGTPGVGPRALAGIV------GNGRWSDTRLVGV 277
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1554.3856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FWA7_ECTSI1.570e-8474.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF69_9PHAE1.590e-8466.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF92_ECTSI9.960e-7971.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K441_9PHAE7.600e-540.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..449
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 450..473
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 474..689
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 301..330
score: 6.925
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 266..295
score: 8.114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1554contigE-fasciculatus_F_contig1554:11314..17466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1554.3856.1mRNA_E-fasciculatus_F_contig1554.3856.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1554 11314..17466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1554.3856.1 ID=prot_E-fasciculatus_F_contig1554.3856.1|Name=mRNA_E-fasciculatus_F_contig1554.3856.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=690bp
AAVVGAAVVGTAAVGAVAPAVVVAEATSPRCEVAELDSGAGPVPQGRGMA
RGDRVHLRSAQDGGQGGGGRMANRGGRGMGVDAAGPMGQVAWNPGRGFGA
EGAAAAASTAETPGVVLRALAEIAPLAEIAGRGNWSNAWHHGVSHLRLGE
ATQKEVKMRNAKFKKTGKEATLRNADSKTSFRPATRTVHARSTAGVAAAA
PTFTSFSFWHKKRVQRMWGDIVHGMLEQAAALESEEVEAAAAVTAALEGA
VAVVVEAAEAAAAAREAGAAVRLQAAARGRAARGKVAARRAEAAAATAAR
EAGAAVRLQSAARRRAARRRAAEQRAAIAARARGAVRIQQAFRARRRVRV
EEADAAAAVAAALGGALQEVAARVEADRAEAQEAEEAAAVDAALGGALEE
VVARVEADRAAAQEADAAAAVAAAVQEEIAPVEAQQAEAAAVTALARGKW
WWGWCQQLLLVAMVVATGSWWVLQGPLSVPCGRASLASGEGPITVGQCLE
SEGGSRYLGWVPGMAWKARLTVTEDGAVYSGSDGQEVPFSAVLGEKKNGD
DSGQEGGMLCSAERMVRRAVPFVGTAEHRARMRGKSLVVGGGIFCHTHAT
PRPPPKSVLDALFRGRGGGIAIFSEHTGDLQVVNSRGEVVWSVGDNTSSS
STSSSSSGSNPAEGRARWWRRGWGKKKKRDGSEKTGGWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS