mRNA_E-fasciculatus_F_contig15537.3855.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: D8LMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA1_ECTSI) HSP 1 Score: 242 bits (617), Expect = 8.690e-73 Identity = 140/173 (80.92%), Postives = 146/173 (84.39%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLKTRRTGGNRDGVGAVETTAERSGVELEGQTGIMPRETCEGGGGGGTNGEAHEQQASTNELMRLSEALEE 521
VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDV+KEELGLK GMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLE+KYRQ+LDKLKTRRTGG+RD G V TT ERS VELEGQ G +T +QQAST ELMRLSEALEE
Sbjct: 64 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVIKEELGLKTGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLERKYRQALDKLKTRRTGGDRDEGGVVGTTEERSRVELEGQ-GXXXXDT--------------DQQASTRELMRLSEALEE 221
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: A0A7S1C3S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3S2_9STRA) HSP 1 Score: 100 bits (248), Expect = 4.120e-24 Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYR 296
VRSLM+S+A L+ ++A TA+ KDHRRS I+A++ ++RE +L DV+K EL + GM EE D+V+RKTVGGP RFRPKTREEL+ ++ LEK+ R
Sbjct: 18 VRSLMKSIATLRDKVATLTAESKDHRRSGQIQALKGKVREAELASDVLKAELRDRLGMTAEEVADFVVRKTVGGPKRFRPKTREELELQVSSLEKRVR 115
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: A0A6A3EMB8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EMB8_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.900e-21 Identity = 54/108 (50.00%), Postives = 83/108 (76.85%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLK 317
VR+LMRS+ +L+++L AQGK+HRRSA+I+ +RT+ REQ+L++DV+K+ L K ++ ND+V++K VG PLRFRPKTREEL+NEL L + ++++++KLK
Sbjct: 87 VRALMRSINQLQEQLQALKAQGKEHRRSALIQELRTQQREQELLIDVLKQTLQEKVPEFQDSRALVNDFVLKKAVGAPLRFRPKTREELENELQALGQNFQRTVEKLK 194
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: A0A6A4D8U6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4D8U6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.930e-21 Identity = 54/108 (50.00%), Postives = 83/108 (76.85%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLK 317
VR+LMRS+ +L+++L AQGK+HRRSA+I+ +RT+ REQ+L++DV+K+ L K ++ ND+V++K VG PLRFRPKTREEL+NEL L + ++++++KLK
Sbjct: 87 VRALMRSINQLQEQLQALKAQGKEHRRSALIQELRTQQREQELLIDVLKQTLQEKVPEFQDSRALVNDFVLKKAVGAPLRFRPKTREELENELQALGQNFQRTVEKLK 194
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: A0A1V9Z379_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z379_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.040e-21 Identity = 52/113 (46.02%), Postives = 84/113 (74.34%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLKTRRTG 332
VRSLM+S+ +L+++++ +Q K+HRRSA+I+++R + REQDL++DV+KE L KA ++ N+++++KT+GGP RFRPKTREEL+ E L+KKY+++L K + G
Sbjct: 72 VRSLMKSIHQLQEQVSAMQSQDKEHRRSALIQSLRKKQREQDLLIDVLKESLATKAPEFQDSIPLVNEFILKKTLGGPKRFRPKTREELELEFLELDKKYKRALQNAKLAKQG 184
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: W2RBF8_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RBF8_PHYPN) HSP 1 Score: 97.8 bits (242), Expect = 1.360e-20 Identity = 53/108 (49.07%), Postives = 83/108 (76.85%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLK 317
VR+LMRS+ +L+++L AQ K+HRRSA+I+ +RT+ REQ+L++DV+K+ L K ++ ND+V++KT GGP+RFRPKTREEL+NEL L + ++++++KLK
Sbjct: 87 VRALMRSINQLQEQLQGLKAQEKEHRRSALIQDLRTQQREQELLIDVLKQTLQEKVSEFQDSRALVNDFVLKKTAGGPMRFRPKTREELENELQTLGQNFQRTVEKLK 194
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: A0A0W8D7H6_PHYNI (Lysosomal thioesterase PPT2-B n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D7H6_PHYNI) HSP 1 Score: 97.8 bits (242), Expect = 1.730e-20 Identity = 53/108 (49.07%), Postives = 83/108 (76.85%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLK 317
VR+LMRS+ +L+++L AQ K+HRRSA+I+ +RT+ REQ+L++DV+K+ L K ++ ND+V++KT GGP+RFRPKTREEL+NEL L + ++++++KLK
Sbjct: 417 VRALMRSINQLQEQLQGLKAQEKEHRRSALIQDLRTQQREQELLIDVLKQTLQEKVSEFQDSRALVNDFVLKKTAGGPMRFRPKTREELENELQTLGQNFQRTVEKLK 524
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: A0A6G0XT65_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XT65_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.880e-20 Identity = 52/112 (46.43%), Postives = 83/112 (74.11%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLKTRRT 329
VR+LM+S+ +L++++A Q K+HRRSA+I+++R + REQDL+VDV+KE L K +++ N+++++KT+ GP RFRPKTREEL+ E L+KKY+++L LK +T
Sbjct: 80 VRALMKSIHQLQEQVATMKTQDKEHRRSALIQSLRKKQREQDLLVDVLKETLQAKVSEFQDDPNLVNEFILKKTISGPKRFRPKTREELELEFAELDKKYKRTLASLKKAKT 191
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: A0A5D6Y320_9STRA (Aa_trans domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y320_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.280e-20 Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAG---MGKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLKTRRTGGNRDGVGAVETTAERSGVELEG 398
VR+LM+S+ +L+++L AQ K+HRRSA+I+ +R LREQ+LV DV+K+ L K + N +V +K VGGPLRFRPKTREEL++EL +L+ KYR++L L+ T + G A + +E E G
Sbjct: 76 VRALMKSINQLQEQLQALRAQDKEHRRSALIQGLRQSLREQELVADVLKQTLAEKLPEFRASRALVNAFVAQKCVGGPLRFRPKTREELESELEQLDTKYRKALGSLRVSATEREQRGAQAKDRDSEAKCRETRG 210
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Match: A0A024TSK4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSK4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 5.620e-20 Identity = 56/135 (41.48%), Postives = 92/135 (68.15%), Query Frame = 3
Query: 3 VRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLKAGM---GKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQSLDKLKTRRTGGNRDGVGAVETT-AERSGVELE 395
VR+LM+S+ +L++++A AQ K+HRRSA+I+ +R + R+Q+LV++V+K+ L K G + ND++++KT+GGP RFRPKTREE++ E L+KKY++ L LK ++ +D T A+ S V++E
Sbjct: 88 VRTLMKSIHQLQEQVATMKAQDKEHRRSALIQNLRKQQRDQELVMEVLKDTLKTKVGEFNNSLDAVNDYILKKTLGGPKRFRPKTREEIELEFVELDKKYKRVLASLKRAKSVAAQDAPAEDATPPADTSSVDVE 222 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15537.3855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15537.3855.1 >prot_E-fasciculatus_F_contig15537.3855.1 ID=prot_E-fasciculatus_F_contig15537.3855.1|Name=mRNA_E-fasciculatus_F_contig15537.3855.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=169bp MRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVVKEELGLback to top mRNA from alignment at E-fasciculatus_F_contig15537:193..2005- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15537.3855.1 ID=mRNA_E-fasciculatus_F_contig15537.3855.1|Name=mRNA_E-fasciculatus_F_contig15537.3855.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1813bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15537:193..2005- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15537:193..2005- >mRNA_E-fasciculatus_F_contig15537.3855.1 ID=mRNA_E-fasciculatus_F_contig15537.3855.1|Name=mRNA_E-fasciculatus_F_contig15537.3855.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1014bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15537:193..2005- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |