prot_E-fasciculatus_F_contig15531.3854.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15531.3854.1
Unique Nameprot_E-fasciculatus_F_contig15531.3854.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length106
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15531.3854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 26..49
e-value: 0.016
score: 24.4
coord: 50..73
e-value: 4.5
score: 16.1
coord: 74..98
e-value: 120.0
score: 4.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 29..82
e-value: 1.7E-11
score: 43.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..105
e-value: 7.7E-19
score: 69.7
NoneNo IPR availablePANTHERPTHR24369FAMILY NOT NAMEDcoord: 18..105
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15531contigE-fasciculatus_F_contig15531:149..2796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15531.3854.1mRNA_E-fasciculatus_F_contig15531.3854.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15531 149..2796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15531.3854.1 ID=prot_E-fasciculatus_F_contig15531.3854.1|Name=mRNA_E-fasciculatus_F_contig15531.3854.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=106bp
SLNNNRLTTAIFSWLDDNGQPLLGGMHDLERLDLRRNSLENVPAGAFDSL
SALQTLNLYYCGVTSLEADAFLGLEALVYLGIGLGNSLGHLPAGAFNGLS
ALRKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp