mRNA_E-fasciculatus_F_contig1551.3844.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Match: D7G719_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G719_ECTSI) HSP 1 Score: 307 bits (786), Expect = 8.170e-93 Identity = 162/169 (95.86%), Postives = 169/169 (100.00%), Query Frame = 3
Query: 150 LLRQESTGLSAVTALLERLRMGMEEEAGTRTILQGIRGACAPPSAICDQLLQLLPLVTPPTALVEALPQFVGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEDDVPVVVRTLFKTARERDSAMVVSRVRAECAGLGMTALAV 656
+++QESTGLSAVTALLERLRMG+EEEAGTRTILQGIRGACAPPS+ICDQLLQLLPLV+PPTALVEALPQFVGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDE+DVPVVVRTLFKTARERDSAMVVSRVRAECAGLGMTALAV
Sbjct: 1 MIKQESTGLSAVTALLERLRMGLEEEAGTRTILQGIRGACAPPSSICDQLLQLLPLVSPPTALVEALPQFVGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEEDVPVVVRTLFKTARERDSAMVVSRVRAECAGLGMTALAV 169
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Match: A0A835Z3F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F5_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.790e-40 Identity = 85/167 (50.90%), Postives = 118/167 (70.66%), Query Frame = 3
Query: 96 ESVVRSPTASDALGLCTRLLRQESTGLSAVTALLERLRMGMEEEAGTRTILQGIRGACAPPSAICDQLLQLLPLVTPPTALVEALPQFVGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEDDVPVVVRTLFKTARERDSA 596
E+VV +P A+DA+ LC LLR E++ L+A TAL+ER+R+G+E++AG I++ I P SA+ Q+LQLLP+V P L++ALPQ V + D+ VV EY+ LL DRS+LV ++GSL+DLPL R V+ +TLEAL++VDE+DVPVVVRTL +T E A
Sbjct: 3 EAVVAAPCAADAIQLCRPLLRHEASALAAGTALMERIRLGLEDKAGVTLIMRAITMQSLPHSAMTAQVLQLLPMVECPQPLIDALPQLVCANTADVDLVVAEYRQLLTADRSLLVPIVGSLHDLPLRRAARAAVAALTLEALAIVDEEDVPVVVRTLLRTCGELQHA 169
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Match: W7TYH3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYH3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.010e-20 Identity = 70/183 (38.25%), Postives = 103/183 (56.28%), Query Frame = 3
Query: 123 SDALGLCTRLLRQESTGLSAVTALLERLRMGMEEEA---GTRTILQGIRGACAPPSAICDQLLQLLPLVTPPTALVEALPQFV-GEDPVDIANVVKEYKDLLEGDRS-MLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEDDVPVVVRTLFKTARERDSAMVVSRVRAECAGLGMTALAV 656
S+AL LL E T L A ALLERL++ E G IL+ + A+ +Q+L+ L L ++EALP V G P ++A VV+ K L+ D + +L+ V+G+L+DLPLG R+E + EAL+VV + DVPV+VRTL ++ + V+ ++R ECA L A+AV
Sbjct: 28 SEALSAAGDLLSHEETRLPAAFALLERLKLSATENGAAQGVDKILRLLGRNLGYHPAVLEQVLEALSLGENSGPIIEALPLLVVGAAPAEVARVVEAMKSALQDDMAGLLLPVLGALFDLPLGPRLRREALALAEEALAVVKDADVPVIVRTLLRSLDDHSDPAVLGQIRRECANLSPQAMAV 210
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Match: A0A0P1A6D9_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6D9_PLAHL) HSP 1 Score: 74.3 bits (181), Expect = 9.000e-12 Identity = 56/186 (30.11%), Postives = 93/186 (50.00%), Query Frame = 3
Query: 81 VDLVLESVVRSPTASDALGLCTRLLRQESTGLSAVTALL--ERLRMGMEEEAG--TRTILQGIRGACAPPSAICDQLLQLLPLVTPPTALVEALPQFVGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEDDVPVVVRTLFKTARERDSAMVVSRVRAEC 626
V + ++V A+ AL +C RLLR ES+ TA L ERLR G +++ +L+ + P + +++L LL L+ LP+ + + V++ Y LL DRS+LV V+GSL ++PL + V T L E+D+P VV++L + + ++R+R+EC
Sbjct: 5 VKMAHRNLVVHGEAAQALEMCRRLLRTESSDQRLETAQLVVERLRSGGTDDSADDVNALLRLLSNYVEPTLELTEEILSLLLFYEHRVLLIHNLPKLTFQSKDCVQLVLQAYLGLLATDRSLLVPVLGSLAEMPLDYSEKTTVVDATQSLLDAAVEEDIPAVVQSLLSMITKSSALKALARLRSEC 190
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Match: A0A3P3YJ73_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJ73_PLABS) HSP 1 Score: 65.5 bits (158), Expect = 9.010e-9 Identity = 50/160 (31.25%), Postives = 82/160 (51.25%), Query Frame = 3
Query: 150 LLRQESTGLSAVTALLERLRMGMEEE--AGTRTILQGIRGACAPPSAICDQLLQLLPLV-TPPTALVEALPQFVGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEDDVPVVVRTLFKTARERDS-AMVVSRVR 617
LL +T AV AL++R EE A +++ + P + LL L V T +VE + D D VV +D+L+ DRS+LV ++ +L LPL DTR E + + +AL++VD++D+P VVR L A + + + +++ +R
Sbjct: 23 LLESSTTSAKAVRALVDRAAALYAEERVAQAEAVVRLVASYAIPGRSATKALLDLASHVDTAAICVVENIASVCDPDNADF--VVDRLQDMLQSDRSLLVPILAALAALPLPQDTRSEATVLARDALAIVDQNDLPAVVRALLLPAANKTAMSQIIASIR 180
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Match: A0A2P6NNA3_9EUKA (Calpain catalytic domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NNA3_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 9.610e-9 Identity = 40/125 (32.00%), Postives = 68/125 (54.40%), Query Frame = 3
Query: 243 ILQGIRGACAPPSAICDQLLQLLPLVTPPTALVEALPQFVGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEDDVPVVVRTLFKTARERDSAMVVSRVR 617
IL+ + P I ++ L P +E + VG+ ++ +V+ YK+L+ +R LV +IGSL D+ L + EV ++ E+LSVV+E D PVVVRTL ++A + + ++ +R
Sbjct: 58 ILRILTDHLCPTPIITQLIIDFLACSEDPLPFIENMSALVGDTEEEVQAIVELYKELVVTNRKCLVPIIGSLSDMSLSNLAKDEVFLLSSESLSVVEERDFPVVVRTLLRSANQNNVGELIRTLR 182
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Match: A0A2V3IY67_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY67_9FLOR) HSP 1 Score: 60.1 bits (144), Expect = 6.370e-7 Identity = 41/123 (33.33%), Postives = 56/123 (45.53%), Query Frame = 3
Query: 267 CAPPSAICDQLLQLLP----------------LVTPPTALVEALPQFVGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEDDVPVVVRTLFKTARER 587
C PP I L LLP L+ P + LP + D I V+ +LL DR++LV ++ +L LPL R ++ ALSVVDE D+P VVR+L +T R
Sbjct: 19 CLPPEKISQALSSLLPRIQYPHPKLTQCMHDLLIIHPHQTIPHLPDILPNDASVIYETVETLSELLASDRTLLVPILATLASLPLSTSHRHQIRFTQQYALSVVDEKDLPAVVRSLVRTTGRR 141
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Match: A0A7S1TGI3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGI3_9RHOD) HSP 1 Score: 57.8 bits (138), Expect = 2.490e-6 Identity = 28/71 (39.44%), Postives = 46/71 (64.79%), Query Frame = 3
Query: 360 VGEDPVDIANVVKEYKDLLEGDRSMLVHVIGSLYDLPLGADTRQEVSTMTLEALSVVDEDDVPVVVRTLFK 572
+ DP ++A VV+ Y+++L DR++LV + SL DLPL + +E AL+ VDEDD+P +VR++ +
Sbjct: 96 ISGDPGEVATVVEVYREVLSADRNLLVPITASLSDLPLTPNQSREFRATLSYALTAVDEDDMPSIVRSVLR 166 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1551.3844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1551.3844.1 >prot_E-fasciculatus_F_contig1551.3844.1 ID=prot_E-fasciculatus_F_contig1551.3844.1|Name=mRNA_E-fasciculatus_F_contig1551.3844.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=194bp MEVDLVLESVVRSPTASDALGLCTRLLRQESTGLSAVTALLERLRMGMEEback to top mRNA from alignment at E-fasciculatus_F_contig1551:2656..6245- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1551.3844.1 ID=mRNA_E-fasciculatus_F_contig1551.3844.1|Name=mRNA_E-fasciculatus_F_contig1551.3844.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3590bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1551:2656..6245- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1551:2656..6245- >mRNA_E-fasciculatus_F_contig1551.3844.1 ID=mRNA_E-fasciculatus_F_contig1551.3844.1|Name=mRNA_E-fasciculatus_F_contig1551.3844.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1164bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1551:2656..6245- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |