mRNA_E-fasciculatus_F_contig1550.3843.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 1587 bits (4108), Expect = 0.000e+0 Identity = 815/1023 (79.67%), Postives = 874/1023 (85.43%), Query Frame = 2
Query: 1118 LTDIPRETAELFNAKPWFTDIKLGVNRWKNPQWQVIQGGWNQVISFYEGLAQSGGVVAVPSLKVVLVGAVHAGKTTLTRGLLDEKLLQVPPPRTRGVDVHVSPWTPKFDPPVEVVIWDFAGHDDYYSTHQLFLTSGALHLLVVDLHKFACDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDDHEGSAAALNELEAAIEEHLEEKRKEWQTAQRQAERAKQTSQDRFAPPASDSSTGYPTGHAAASPPKLQLCGFISASGRSLGDLSVLGRKIWQIASDVSLFPDIKK-LPKSWRRVWAVMDALREGADPEKAVRLDGPLAPVQGRDKHDFVTREAALEAWWRADGESVAELKAKDPDSQTLNQDSSRLFQAALKQRQMGGLVLEACGLVHLNVAWINELLRELLDHRLADPKQASYANWWVGKLKTHCHDRGVKFNRLIGIHRRFVITGILTKEYLRFLWRDVKAVRDEEVFGRLVNTMALHDAMFPCEKNGGHEGEGEFVVPARLPASVACASLAELEKAVSQGTRMQFVIAIHAGYVPPGIIPQFLGELKRRDGGVSGNFVFHVSWNRGVGFMTAGQEILVRLGETCSPSQRFVEVNIAGDT*KDVDKTGFEIKRIVAHLLEERYPGLDFDPEADPTFLDGRAAWQDTLAALRGDLVEELERNLETVLRMFLDSSSNPGDGLAESNMLIPKLIDRALAKRFSSLCSDMQLDVGRQLNETTLEIVARVEEAVQAKLSTTAVTGLRQTDRDILVGVARGLASLGSPIPRFVCVLPARGTRLEESDRSFEKWSTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LVTRELRLFFLCAEDMSLAECGPDGQGYEVKEFLDWVKIVAPAAKIGWALASIALKVCTGLAVSTDMFKAAFGTSEGLSAFVEDTVSVGIDGVTSRADERLGRLQNSGPSEGLPHAGAQGDGVRKKPNPLEGFDYEQLKEVIKSFEVDRMQSDGSRYPSFDTTMRIMDRGGRGVEWAWVRNRNIDEFVGE 4180
LTDIPR TAE FNAKPW DIKL +NRWKNP WQVIQGGW QVISFYEGLAQSGGV VPSLKVVLVGAVHAGKTTLTRGLLD KL +VPPPRTRGVDVH++PWTP FDP VEVVIWDFAGHDDYYSTHQLFLTSG+LH+LVVDLHKF CDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGD+ E SAAAL++LEAAI +HL+EKR+EWQTAQRQAE+AKQT QDR P AS S+TGYP HAAA PP LQLCGFI SGRSL DLSVLGRKIW+IA++ SLFPDI + +PKSWRRVWAVMDALREGADP+KAVRLDGPLAPV+GR+K +FVTREAA EAWW DGESVAELKAK PDSQ L QDSSRLFQAALK RQMGG VL ACGLVHLNVAWINELLRELLDHRLADPKQA WWV +LKT+CHDRGVKFNRLIGIHRRFVITG+LTKEYLRFLWR+VKAV+DEEVF RLV+TMALHDAMFPCEKNG E EGEF+VPARLPASVACASLAELE AVSQGTRMQFVI I AGYVPPGIIPQFLGELKRRDGG+SG+FVFHVSW+RGV FMTAGQEILVRLGETC+PSQR VEVNIAG KDV TGF IK +V LLE+RYPGLDFDPE PTF GR AWQDT AALRGDLVEELE NLE VLR L+ SS+PGDGLAESN LIPKLID ALAKR SSLCSDMQLDV R+LNETT+++VA VE+ VQA LS AV GLR T+RDILVGVAR +A L PIPRFVCVLPAR TRL ESDRSFEKWSTAL LVTRELRLFFLC +D SLAECGPDGQGYEVKEFLDWV+ APAAKIG ALASIALKVCTGLAVSTD F+AAFGTSE +SAFVED +S GI+G TS+A RL RLQNSGPSE LPHAG +GDG++ PLEGFDY++LKEVIKSFEVDR Q DGSRYPSFDTTM I+DR G GVEWAWVRNRNID+FVGE
Sbjct: 122 LTDIPRATAETFNAKPWLRDIKLELNRWKNPPWQVIQGGWYQVISFYEGLAQSGGVAVVPSLKVVLVGAVHAGKTTLTRGLLDGKLAKVPPPRTRGVDVHINPWTPNFDPAVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKFVCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQTPQDRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREAAFEAWWGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAK---WWVEQLKTYCHDRGVKFNRLIGIHRRFVITGMLTKEYLRFLWREVKAVQDEEVFDRLVDTMALHDAMFPCEKNGVLE-EGEFMVPARLPASVACASLAELENAVSQGTRMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAFMTAGQEILVRLGETCAPSQRVVEVNIAGGAEKDVYATGFGIKNLVVRLLEQRYPGLDFDPETKPTFKKGREAWQDTRAALRGDLVEELEPNLEAVLRKILEPSSSPGDGLAESNTLIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMKVVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVAILRWPIPRFVCVLPARDTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSEDMSAFVEDALSAGIEGTTSKAGNRLDRLQNSGPSERLPHAGVRGDGMQTL-IPLEGFDYDKLKEVIKSFEVDRTQRDGSRYPSFDTTMNIVDRRGHGVEWAWVRNRNIDQFVGE 1139
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: A0A6H5L6I0_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE) HSP 1 Score: 1236 bits (3197), Expect = 0.000e+0 Identity = 627/790 (79.37%), Postives = 682/790 (86.33%), Query Frame = 2
Query: 1124 DIPRETAELFNAKPWFTDIKLGVNRWKNPQWQVIQGGWNQVISFYEGLAQSGGVVAVPSLKVVLVGAVHAGKTTLTRGLLDEKLLQVPPPRTRGVDVHVSPWTPKFDPPVEVVIWDFAGHDDYYSTHQLFLTSGALHLLVVDLHKFACDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDDHEGSAAALNELEAAIEEHLEEKRKEWQTAQRQAERAKQTSQDRFAPPASDSSTGYPTGHAAASPPKLQLCGFISASGRSLGDLSVLGRKIWQIASDVSLFPDI-KKLPKSWRRVWAVMDALREGADPEKAVRLDGPLAPVQGRDKHDFVTREAALEAWWRADGESVAELKAKDPDSQTLNQDSSRLFQAALKQRQMGGLVLEACGLVHLNVAWINELLRELLDHRLADPKQASY--------ANWWVGKLKTHCHDRGVKFNRLIGIHR---------------RFVITGILTKEYLRFLWRDVKAVRDEEVFGRLVNTMALHDAMFPCEKNGGHEGEGEFVVPARLPASVACASLAELEKAVSQGTRMQFVIAIHAGYVPPGIIPQFLGELKRRDGGVSGNFVFHVSWNRGVGFMTAGQEILVRLGETCSPSQRFVEVNIAGDT*KDVDKTGFEIKRIVAHLLEERYPGLDFDPEADPTFLDGRAAWQDTLAALRGDLVEELERNLETVLRMFLDSSSNPGDGLAESNMLIPKLIDRALAKRFSSLCSDMQLDVGRQLNETTLEIVARVEEAVQAKLSTTAVTGLRQTDRDILVGVARGLASL 3421
DIP+ TAE FNAKPW DIKL +NRW P WQVIQGGW QVISFYEGLAQSG V VPSLKVV VGAVHAGKTTLTRGLLD KL ++PPPRTRGVDVHV+PWTP FDPPVEVVIWDFAGHDDYYSTHQLFLTSG+LH+LVVDLHKF CDPSSTGDTVYVWLDSLLCRVPGSVVLVVAT+ADAFGD+HE SAAAL++LEAAI EHLEEKR EWQTAQRQAE KQT QDR PPAS S+TGYP HAAA PP LQLCGFIS SGRSL DLSVLGRKIW+IA + SLFPDI +K+PKSWRRVWAVMDALREGADP+KAVRLDGPLAPV+GR+K +FVTRE A EAWW ADGESVAELKAK PDSQ LNQDS RLFQAALK RQMGG VL ACGLVHLNVAWINELLRELLDHRLADPKQAS+ ANWWV +L+T+C +RGV FNRLIGIHR RFVITG++TKEYLRFLWR+VKAV+D+EVF RLV+TMALHDAMFPC+KNG H+ EGEF+VPARLPASV CASLAELEKA+SQGTRMQFVIAI+AGYVPPGIIPQFLGELKRRD G+SG FVFHVSW+RGV FMTAGQ+ILVRLGETC PSQR VEVNIAGD KDV TGF IK+++ LLE+RYPGLDFDPEA+PT + G+ AWQ+T AALRGDLVEELERNLE VLR L+ SSNPGDGLAESN LIPKLID ALAKR +SLCSDMQLDV R+LNETT+EIVA VE+ VQA LS AV GLR ++R+ILVGVAR LA L
Sbjct: 19 DIPKATAETFNAKPWLRDIKLELNRWNKPPWQVIQGGWYQVISFYEGLAQSGAVAVVPSLKVVFVGAVHAGKTTLTRGLLDGKLAKLPPPRTRGVDVHVNPWTPNFDPPVEVVIWDFAGHDDYYSTHQLFLTSGSLHVLVVDLHKFVCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATYADAFGDNHERSAAALSKLEAAIHEHLEEKRMEWQTAQRQAENTKQTPQDRCGPPASGSTTGYPADHAAAPPPTLQLCGFISGSGRSLEDLSVLGRKIWEIAHEESLFPDIHQKIPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQHLNQDSQRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFVSLSHFAAANWWVEQLRTYCRERGVLFNRLIGIHRVQTVPCKNNQSCALRRFVITGVITKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCDKNGIHQ-EGEFMVPARLPASVPCASLAELEKAISQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDCGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCVPSQRVVEVNIAGDAEKDVYDTGFAIKKLIVRLLEKRYPGLDFDPEANPTLMKGKEAWQETRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRLTSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVVGLRPSERNILVGVARELALL 807
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 1010 bits (2611), Expect = 0.000e+0 Identity = 555/1029 (53.94%), Postives = 691/1029 (67.15%), Query Frame = 2
Query: 1121 TDIPRETAELFNAKPWFTDIKLGVNRWKNPQWQVIQGGWNQVISFYEGLAQSGGVVAVPSLKVVLVGAVHAGKTTLTRGLLDEKLLQVPPPRTRGVDVHVSPWTPKFDPPVEVVIWDFAGHDDYYSTHQLFLTSGALHLLVVDLHKFACDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDDHEGSAAALNELEAAIEEHLEEKRKEWQTAQRQAERAKQTSQDRFAPPASDSSTGYPTGHAAASPPKLQLCGFISASGRSLGDLSVLGRKIWQIASDVSLFPDIKKL-PKSWRRVWAVMDALREGADPEKAVRLDGPLAPVQGRDKHDFVTREAALEAWWRADGESVAELKAKDPDSQTLNQDSSRLFQAALKQRQMGGLVLEACGLVHLNVAWINELLRELLDHRLADPKQASYANWWVGKLKTHCHDRGVKFNRLIGIHRRFVITGILTKEYLRFLWRDVKAVRDEEVFGRLVNTMALHDAMFPCEKNGGHEGEGEFVVPARLPASVACASLAELEKAVSQGTRMQFVIAIHAGYVPPGIIPQFLGELKRRDGGVSGNFVFHVSWNRGVGFMTAGQEILVRLGETCSPSQRFVEVNIAGDT*KDVDKTGFEIKRIVAHLLEERYPGLDFDPEADPTFLDGRAAWQDTLAALRGDLVEELERNLETVLRMFLDSSSNPGDGLAESNMLIPKLIDRALAKRFSSLCSDMQLDVGRQLNETTLEIVARVEEAVQAKLSTTAVT--GLRQTDRDILVGVARGLASLGSPIPRFVCVLPAR--GTR-LEESDRSFEKWSTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTRELRLFFLCAEDMSLAECGPDGQGYEVKEFLDWVKIVAPAAKIGWALASIALKVCTGLAVSTDMFKAAFGTSEG--LSAFVEDTVSVGIDGVTSRADERLGRLQNSGPSEGLPHAGA---QGDGVRKKPNPLEGFDYEQLKEVIKSFEVDRMQSDGSRYPSFDTTMRIMDRGGRGVEWAWVRNRNIDEFV 4174
+DIP TAE A P + + L N W+ P W VIQGGW+QV+SF+EGL+QSGG V VPSLKVVLVGAV AGKTTL RGLLD K+ Q PPRTRG+DVH+ PW P FDPP+EV+IWDFAGHDDY+STHQ+FLT GALHLLVVDLHKF D S G VY+WLDSLLCRVPGS VLVVATHADAFGDDHE SA AL L+AA+ EHLE KR++W A+R ER + SQ R A D + P + +PP L LCGFIS SGRSL LS +G KIW++A++ ++FP ++K+ P WRRVWAVMDAL GADP+ AVRL+GP+ ++GRDKH+FVT E A E W AD ES +L+A + L SSR F+AAL R MGG VL CGL+HLN +WIN LLRE+LDHRL DP + WW +LK + +RG+ N L+ HR F TGILT+E+LRFLWRDV DE+VF RLV TM HDAMFPC EF+VPARLP V S A+LE A+S+GTRMQFVI I+A YVPP II +FLG R + GV N +F W RGV F+ G+E LVR+GE + +E+NIAG DV K GFEIK+ V LL E YPGL FD A P F +G AWQD+L AL+ DL ++L++ LE+VL FL++ G L+ ++ A+A+R +SLC D Q D QL+ E+VARVE+ V+A LSTTAV GL +T+R IL +AR +A L PIP +CVLPAR G + L+E DRSFE+WST L + T++LRLFFLC DMSLAECGPDGQGY+V E L W K P A++G ALASIA+KVCTGLA+ +A GT+ G LS FVE+ ++ ++ + + A ERL ++ P+E + HAGA + + +R+ P P++GF Y+QLKEVI+SF+VD Q S PSFD TM+++DRGGRGVEWAWVR RN+D++V
Sbjct: 130 SDIPGATAERLKAMPELS-VDLKGNPWETPPWNVIQGGWDQVVSFHEGLSQSGGQV-VPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPPRTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKFDRDVLSRGGGVYIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEER-ELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPAVFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDE---WWWKQLKAYERNRGIPINELLETHRHFTTTGILTEEFLRFLWRDVLKGVDEKVFARLVETMTAHDAMFPCNDGVTEGNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLVRVGEVSARPLPMIEINIAGPDVNDVFKVGFEIKKNVKDLLREAYPGLAFDSSAHPRFENGTEAWQDSLEALQKDLFDKLDQRLESVLSEFLEAFK--GQSLS---------VNEAVARRLNSLCLDCQRDANFQLDAKVHEVVARVEQVVRASLSTTAVPKGGLNETERGILNSLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCSEGNKMGRG------------------VATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERL---EDGSPAERVHHAGACRLEREKMRR-PTPVQGFAYDQLKEVIRSFDVDETQKGKSPVPSFDKTMQLVDRGGRGVEWAWVRRRNVDQYV 1119
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 331 bits (849), Expect = 6.670e-90 Identity = 339/1095 (30.96%), Postives = 481/1095 (43.93%), Query Frame = 2
Query: 1130 PRETAELFNAKPWFTDIKLGV--NRWKNPQWQVIQGGWNQVISFYEGLAQSGGVVAVPSLKVVLVGAVHAGKTTLTRGLLDEKLLQVPPPRTRGVDVHV-------SPWTPKFDPPVE--VVIWDFAGHDDYYSTHQLFLTSGALHLLVVDLHKFACDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDDHEGSAAALNELEAAIEEHLEEKRKEWQTAQRQAERAKQTSQDRFAPPASDSSTGYPTGHAAASPPKLQL------CGFISASGRSLGDLSVLGRKIWQIAS---DVSLFPDIKKL-PKSWRRVWAVMDALREGADPEKAVRLDGPLAPVQG----RDKHDFVTREAALEAWWRADGESVAEL-----KAKDPDSQTLNQDSSRLFQAALKQRQMGGLVL-----------------------EACGLVHLNVAWINELLRELLDHRLADPKQASYANWWVGKLKTHCHDRGVKFNRLIGIHRRFVITGILTKEYLRFLW---RDVKAVRDE----EVFGRLVNTM--ALHDAMFPCEKNGGHEG--EGEFVVPARLP----ASVACASLAELEKAVSQGTRMQFVIAIHAGYVPPGIIPQFLGELKRRDGGVSGNFVFHVSWNRGVGFMTAGQEILVRLGETCSPSQRFVEVNIAGDT*KDVDKTGFEIKRIVAHLLEERYPGLDFDPEADPTFLDGRAAWQDTLAALRGDLVEELERNLETVLRMFLDSSSNPGDGLAESNMLIPKLID-----RALAKRFSSLCSDMQLDVGRQLNETTLEIVARVEEAVQAKLSTTAVTGLRQTDRDILVGVARGLASLGSPIPRFVCVLPARGTR---LEESDRSFEKWSTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTRELRLFFLCAEDMSLAECGPDGQGYEVKEFLDWVKIVAPAAKIGWALASIALKVCTGLAVSTDMFKAAFGTSEG--LSAFVEDTVSVGIDGVTSRADERLGRLQNSGPSEGLPH-AGAQGDGVRKKPNPLEGFDYEQLKEVIKSFEVDRMQSDGSRYPSFDTTMRIMDRGGRGVEWAWVRNRNIDEFVG 4177
PR AE F A+ ++ +G N WK P +V+ G F L G + LKVVLVG AGKT++ L D P P R V V + P P VE V +WDFAG YY THQ+FLT GAL +LVVD+ + + S D + WL+ L RVPGSVVL+V TH D F ++ + + +EE + R E +A+ DR + T G+ P ++ L S+ G+ D+ +L +++ +A D FP ++ + P+ + A ++A+R GAD + R +A G + + FV A+ + + G + + +A +P R+F AA+K + G +L A ++H+N + +L+R ++D RL DP+Q + V + C L H+RFV G ++K+YL+FLW D+ E E+ V M +L D F G +VV + LP +V + EL+ + ++ ++ HA VPPG++P+ L R +G + W RGV F A + LV L E + +D T + +E G D ++ R A +D GD V EL + PG GL S +I +AL +R + D Q++V ++ + +RQ +A L PIPR VCVLPA +R LEE DRSFE+WS L TR+LR+FFLC D SLAECGP GQGYEV E L W K P A++G ALASIAL+VC GLA+ F+A GT G LS F E++++ GI+ V S A ERL + G +EGLP AGA G + P+P++GF YE LKEVIKSFEVD M+ S +PSFD M ++DRGGRG EWAWVR +NID+F G
Sbjct: 302 PRLVAEGFAAR----NVTVGTENNPWKEPPAEVMNKGMAHAAVFLRDLDDYGRAWS-NRLKVVLVGLGEAGKTSIATRLEDRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYT-EGQSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAK-----------DRVETELGEGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQ---DIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEP---------RRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAK----VEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHA--VPPGLVPRLLAWCGRGEGRIK------ACWKRGVCF--AFKNHLVLLYEV-----------------RAIDGTSW---------IECHARGNVSDDDS------ARTALKDI-----GDQVHELIND---------HKYGFPGLGLVRSGESEETVISSDSDHKALLERIVDVLRD-QMNVKFMMDRS-----------------------MRQD-----------VAFLRWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKG------------------FATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERL----DGGRAEGLPQGAGAHG-AQQGWPSPVQGFTYETLKEVIKSFEVDGMRG-RSPFPSFDAKMHLVDRGGRGEEWAWVRTKNIDQFAG 1248
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 312 bits (799), Expect = 4.030e-85 Identity = 334/1106 (30.20%), Postives = 475/1106 (42.95%), Query Frame = 2
Query: 1130 PRETAELFNAKPWFTDIKLGVNRWKNPQWQVIQGGWNQVISFYEGLAQSGGVVAVPSLKVVLVGAVHAGKTTLTRGLLDEKLLQVPPPRTRGVDVHV-------SPWTPKFDPPVE--VVIWDFAGHDDYYSTHQLFLTSGALHLLVVDLHKFACDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDDHEGSAAALNELEAAIEEHLEEKRKEWQTAQRQAERAKQTSQDRFAP--PASDSSTGYPTGHAAASPPKLQLCGFISASGRSLGDLSVLGRKIWQIAS---DVSLFPDIKKL-PKSWRRVWAVMDALREGADPEKAVRLDGPL--APVQG------RDKHDFVTREAALEAWWRADGES----VAELKAK------------DPDSQTLNQDSS--RLFQAALKQRQMGGLVL--EACG---------------------LVHLNVAWINELLRELLDHRLADPKQASYANWWVGKLKTHCHDRGVKFNRLIGIHRRFVITGILTKEYLRFLW-RDVKAVRDE------EVFGRLVNTM--ALHDAMFPCEKNGGHEG--EGEFVVPARLP----ASVACASLAELEKAVSQGTRMQFVIAIHAGYVPPGIIPQFLGELKRRDGGVSGNFVFHVSWNRGVGFMTAGQEILV-RLGETCSPSQRFVEVNIAGDT*KDVDKTGF-EIKRIVAHLLEER---YPGLDFDPEADPTFLDGRAAWQDTLAALRGDLVEELERNLETVLRMFLDSSSNPGDGLAESNMLIPKLIDRALAKRFSSLCSDMQLDVGRQLNETTLEIVARVEEAVQAKLSTTAVTGLRQTDRDILVGVARGLASLGSPIPRFVCVLPA--RGTR-LEESDRSFEKWSTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTRELRLFFLCAEDMSLAECGPDGQGYEVKEFLDWVKIVAPAAKIGWALASIALKVCTGLAVSTDMFKAAFGTSEG--LSAFVEDTVSVGIDGVTSRADERLGRLQNSGPSEGLPHAGAQGDGVRKK-PNPLEGFDYEQLKEVIKSFEVDRMQSDGSRYPSFDTTMRIMDRGGRGVEWAWVRNRNIDEFVG 4177
PR AE F A + N WK P V++ G F L G + LKVVLVG AGKT++ L D P P R V V + + P VE V +WDFAG YY THQ+FLT GAL +LVVD+ +A + S D V WLD L RVPG+V+L+V TH D F D+ + + +E+ ++ Q + AK ++ P + + Y L L + D+ +L R++ +A D F ++ + P+ + V A ++A+R GAD +R G A VQ R + FV A+ + ES V+ L A +D R+F AA+K + G +L E G ++H+N + +L+R ++D RL DP+Q V + C L H+RFV G ++K+YL+FLW RD++ + E+ V+ M +L D F GH+ +VV + LP V + EL+ + ++ ++ HA VPPG++P+ L R +G + W RGV F +L+ + +T S ++E + G + +T +I V L+ +R +PGL +RG+ E L S+ GD AL KR ++ D Q++V ++ + + + LA L PIPR VCVLPA G + LEE DRSF+KWS L + TR+LRLFFLC D SLAECGP GQGYEV E L W K P AK+G ALAS A KVCTGL++ F+A GT G LS FVED+++ G + + S A ERL E L GAQ G ++ P+P++ F Y+ LKEVIK FEV M+ D S +PSFD MR++DRGG+G EW+WVR +NID+FVG
Sbjct: 7 PRLVAEEFAASS--VTVDTDNNPWKEPPADVMKRGMAYAAVFLRDLDDYGRAWS-NRLKVVLVGLGGAGKTSIATRLEDRLGGCCPNPEERTVGVEIRNIKLGPGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYA-EGHSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKR-------ISCQCDSAKNLAETELGERHPDLEGNPHYRPLRVVLEEDLLTL----DLTSSDWEDIGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGAD----LRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVK----VEQAMAACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHA--VPPGLVPRLLAWCGRGEGHIK------ACWKRGVCFAFKNHMVLLYEVRDTAGNS--WIECHARGSMFDESARTALNDIGDQVNELINDRKYGFPGLGL---------------------IRGESEEALV--------------SSDGD-------------HEALVKRIVNMLRD-QMNVKFMMDRS----------------------------------IKQDLAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFDKWSATLRNWCLGGKRKGKG------------------VATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIPEADFEATLGTKAGGALSTFVEDSLNSGGESMASIAGERL---DGGTADELLQGVGAQRFGAQQGWPSPVQAFAYDALKEVIKRFEVANMR-DRSPFPSFDVKMRLVDRGGQGAEWSWVRTKNIDQFVG 974
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 290 bits (742), Expect = 7.280e-78 Identity = 322/1108 (29.06%), Postives = 474/1108 (42.78%), Query Frame = 2
Query: 1133 RETAELFNAKPWFTDIKLGVNRWKNPQWQVIQGGWNQVISFYEGLAQSGGVVAVPSLKVVLVGAVHAGKTTLTRGLLDEKLLQVPPPRTRGVDVHV-------SPWTPKFDP--PVEVVIWDFAGHDDYYSTHQLFLTSGALHLLVVDLHKFACDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDD-----------HEGSA--------AALNELEAAIEEHLEEKRKEWQTAQRQAERAKQTSQDRFAPPASDSSTGYPT---GHAAASPPKLQLCGFISA---SGRSLGDLSVLGRKIWQIASDVSLFPDIKKLPKSWRRVWAVMDALREGADPEKA---VRLDGPLAPVQGRDKHDFVTREAALEAWWRADGESVAELKAKDPDSQTLNQDSSRLFQAALKQRQMGGLV----LEACG-------------------LVHLNVAWINELLRELLDHRLADPKQASYANWWVGKLKTHCHDRGVKFNRLIGIHRRFVITGILTKEYLRFLW---RDVKAVRDE----EVFGRLVNTM--ALHDAMFPCEKNGGHEG--EGEFVVPARLP----ASVACASLAELEKAVSQGTRMQFVIAIHAGYVPPGIIPQFLG-------ELKRRDGGVSGNFVFHVSWNRGVGFMTAGQEILVRLGETCSPSQRFVEVNIAGDT*KDVDKTGFEIKRIVAHLLEERYPGLDFDPEADPTFLDGRAAWQDTLAALRGDLVEELERNLETVLRMFLDSSSNPGDGL-----AESNMLIPKLIDRALAKRFSSLCSDMQLDVGRQLNETTLEIVARVEEAVQAKLSTTAVTGLRQTDRDILVGVARGLASLGSPIPRFVCVLPA--RGTR-LEESDRSFEKWSTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTRELRLFFLCAEDMSLAECGPDGQGYEVKEFLDWVKIVAPAAKIGWALASIALKVCTGLAVSTDMFKAAFGTSEG--LSAFVEDTVSVGIDGVTSRADERLGRLQNSGPSEGLPHAGAQGDGVRKK-PNPLEGFDYEQLKEVIKSFEVDRMQSDGSRYPSFDTTMRIMDRGGRGVEWAWVRNRNIDEFVG 4177
R AE F A+ ++ G N WK P +V++ G F + L G LKVVLVG AGKT++ L P P R V V + P P ++V +WDFAG YY THQ+FLT GAL +LVVD+ + S D + WL+ L RVPGS++L+V TH D F + EG + + L+ +++ + R E +A+ +AE ++ G+ T G+ P ++ L + A + D+ +L ++ +A + L S AV LREG +P+K VR ++ + +E ++ +W S + L+ +P R+F AA+K + G + ++ G ++H+N + +L+R ++D RL P+Q + V + C L H+RF+ TG ++K+YL+FLW D++ E E+ V M +L D F G +VV + LP V + EL+ + ++ ++ +HA VPPG++P+ L E++ DG SW +E + G+ FD A R A +D GD V+EL + + PG GL +E ++ +AL +R + D Q++V ++ + +RQ +A L PIPR VCVLPA G + LEE DRSFE+WS L TR+LR+FFLC D S+AECGP GQGYEV E ++W K P+AK+G ALASIAL+VC GLA+ FKA GT G LS F E+++ G++ V S A +RL + G +EGLPH GA G G +++ P+P++G YE LKEVIKSFEVD M+ S +PSFD MR++DRGGRG EWAWVR +NID+FVG
Sbjct: 48 RLVAEGFAARN--VTVRTGENPWKEPPAKVMEKGMAHTAVFLKDLDDYGRAW-YNRLKVVLVGLGEAGKTSIATRLEGRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGIGPNDELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYEVGQSKE-DALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAE--------------AELGEGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNGGA-----DLRGSGSTREAVAQRLREG-NPKKRRSFVRFSEAVSLFAAQ-------QEGSMLSWL-----SNSFLRDNEP---------RRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAK----VEEAMEACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHA--VPPGLVPRLLSCHLVLLYEVRATDG---------TSW---------------------------IECHARGNV---------------------------FDESA-------RTALKDI-----GDQVDELISD---------HKNRFPGLGLVRSGESEETVVYSDSDHKALLERIVDVQRD-QMNVKLMMDRS-----------------------MRQD-----------VAFLRWPIPRLVCVLPAPESGAKPLEEGDRSFEQWSATLRNWCLGGKRTGKG------------------FATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIALRVCIGLAIPEVDFKATLGTKAGGALSTFAEESLHSGVESVASIAGDRL----DGGRAEGLPH-GAGGHGAQQEWPSPMQGITYETLKEVIKSFEVDGMRH-RSPFPSFDVKMRLVDRGGRGAEWAWVRTKNIDQFVG 961
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: A0A6H5L6V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V0_9PHAE) HSP 1 Score: 242 bits (618), Expect = 4.230e-70 Identity = 122/162 (75.31%), Postives = 139/162 (85.80%), Query Frame = 2
Query: 3698 VKEFLDWVKIVAPAAKIGWALASIALKVCTGLAVSTDMFKAAFGTSEGLSAFVEDTVSVGIDGVTSRADERLGRLQNSGPSEGLPHAGAQGDGVRKKPNPLEGFDYEQLKEVIKSFEVDRMQSDGSRYPSFDTTMRIMDRGGRGVEWAWVRNRNIDEFVGET 4183
VKEFLDWV VAPAAKIG LASIALKVCTGLAVS D F+AAFGTSE LSAFV+D +S GI+G+TS+A RL RLQNSGPSE LPHAG +GDG +K P PLEGFDY++LKEV+KSFEVDR Q DG+RYPSFDTTM+I+DR G GVEWAWVRN +ID+F GE+
Sbjct: 8 VKEFLDWVGKVAPAAKIGLTLASIALKVCTGLAVSADTFEAAFGTSEDLSAFVQDALSAGIEGMTSKAGNRLERLQNSGPSERLPHAGVRGDGAQK-PTPLEGFDYDKLKEVVKSFEVDRTQGDGTRYPSFDTTMKIVDRHGGGVEWAWVRNGHIDKFAGES 168
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: A0A6H5JXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK6_9PHAE) HSP 1 Score: 241 bits (616), Expect = 1.400e-66 Identity = 186/504 (36.90%), Postives = 241/504 (47.82%), Query Frame = 2
Query: 2480 ILTKEYLRFLWRDVKAVRDEEVFGRLVNTMALHDAMFPCEKNGGHEGEGEFVVPARLPASVACASLAELEKAVSQGTRMQFVIAIHAGYVPPGIIPQFLGELKRRDGGVSGNFVFHVSWNRGVGFMTAGQEILVRLGETCSPSQRFVEVNIAGDT*KDVDKTGFEIKRIVAHLLEERYPGLDFDPEADPTFLDGRAAWQDTLAALRGDLVEELERNLETVLRMFLDSSSNPGDGLAESNMLIPKLIDRALAKRFSSLCSDMQLDVGRQLNETTLEIVARVEEAVQAKLSTTAVTGLRQTDRDILVGVARGLASLGSPIPRFVCVLPARGTRLEESDRSFEKWSTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTRELRLFFLCAEDMSLAECGPDGQGYEVKEFLDWVKIVAPAAKIGWALASIALKVCTGLAVSTDMFKAAFGTSEG--LSAFVEDTVSVGIDGVTSRADERLGRLQNSGPSEGLPHAGAQGDGVRK 3985
+L+ EYL FLW V V D+EVFG L+ T+ALHD MF + +G G+ +VPARLP SV+ ASLA L++AVSQ TRMQ VI A +VPP IP FLG R+ N VF RG+ FM +GQE L DV K GF K + LLE+ YPGL D ADPT +G+ AWQD+L LRG E L +D ALA R S + MQLD E+ A S + GL QT+R++L +A+ +A + PIPR V +L A + E + + ++ + A LVTR+LRLFF + SLA CGP G V E L+W K AAK+G A+ASIALKVC GLA+ AAFG S G ++ VE+ + ID +TS A GR+++ G +E L HAG + K
Sbjct: 1 MLSVEYLGFLWLKVVTVIDDEVFGSLLETLALHDVMFLFDDDGNQGRVGDLMVPARLPGSVSEASLAMLKQAVSQSTRMQLVITADAEHVPPATIPLFLGGFCCRE-----NIVFCACRTRGLAFMMSGQECL------------------------DVSKVGFRAKGSMEQLLEQYYPGLQLDASADPTEGEGKEAWQDSLKGLRG--TESLG-------------------------------LDEALANRLSRPRAGMQLD----------EL---------APTSGAGIGGLNQTERNVLTSIAQNVAFMRWPIPRLVWLLLAPDSG-EPALTAEQRCNQA----------------------------KGRRLVTRKLRLFFRYSHHYSLAVCGPGGA--RVTELLNWAKKAKSAAKVGLAVASIALKVCIGLAIPRMDLNAAFGASTGDVVTGVVEEAATSSIDSMTSAAG---GRIESGGQTERLEHAGVNAGAMEK 389
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: D7G3R3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R3_ECTSI) HSP 1 Score: 198 bits (503), Expect = 1.840e-51 Identity = 102/145 (70.34%), Postives = 112/145 (77.24%), Query Frame = 2
Query: 164 QAPYQGQGFDSMQRRFSSITLEQPEAVAGRAGGMDGGAAQAVAAPARNREHEDVVALSTQPISNSEAQLGMASTDRNALIALFEATRGAKWRKNDNWGTREALGTWYGVDVDAGGRVIKLSLYDNNLEGSLPPQLGDLGALQLLA 598
QAP G G M RRFSS TLE PE VA RAG + GGAAQAVAAPARN EHED+VALSTQP S SE MAS DR+ALI LF TRGA WR+ NWGT E LGTWYGVDV+A GRV+KLSLY+NNL+G LPP+LG LGAL+ LA
Sbjct: 212 QAPSHGLGIGGMLRRFSSFTLEHPEGVARRAGDVGGGAAQAVAAPARNSEHEDIVALSTQPKSESEPLCAMASADRDALITLFHETRGANWREKGNWGTSEVLGTWYGVDVNAEGRVVKLSLYNNNLQGLLPPELGKLGALEHLA 356
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 167 bits (424), Expect = 4.550e-38 Identity = 234/951 (24.61%), Postives = 366/951 (38.49%), Query Frame = 2
Query: 1130 PRETAELFNAKPWFTDIKLGVNRWKNPQWQVIQGGWNQVISFYEGLAQSGGVVAVPSLKVVLVGAVHAGKTTLT---RGLLDEKLLQVPPPRTRGVDVHVSPWTP-------KFDPPVEVVIWDFAGHDDYYSTHQLFLTSGALHLLVVDLHKFACDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDDHEGSAAALNELEAAIEEHLEEKRKEWQTAQRQAERAKQTSQDRFAPPASDSSTGYPTGHAAASPPKLQLCGFISASGRSLGDLSVLGRKIWQIASDVSLFPDIK-KLPKSWRRVWAVMDALREGA-------DPEKAVR-LDGPLAPVQGRDKHDFVTREAALEAWWRADGESVAELKAKDPDSQTLNQDSSRLFQAA--LKQRQMGGLVLEACG---------------LVHLNVAWINELLRELLDHRLADPKQASYANWWVGKLKTHCHDRGVKFNRLIGIHRRFVITGILTKEYLRFLW--RDVKA------------VRDEEVFGRLVNTMALHDAMFPCEKNGGHEGEGEFVVPARLPASVACASLAELEKAVSQGTRMQFVIAIHAGY---VPPGIIPQFLGELKRRDGGVSGNFVFHVSWNRGVGFMTAGQEILVRLGETCSPSQRFVEVNIAGDT*KDVDKTGFEIKRIVAHLL------EERYPG--LDFDPEADPTFLDGRAAWQDTLAALRGDLVEELERNLETVLRMFLDSSSNPGDGLAESNMLIPKLIDRALAKRFSSLCSDMQLDVGRQLNETTLEIVARVEEAVQAKLSTTAVTGLRQTDRDILVGVARGLASLGSPIPRFVCVLP--ARGTRLEESDRSFEKWSTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTRELRLFFLCAEDMSLAECGPDGQGY--EVKEFLDWVKIVAPAAKIGWALASIALKVCT 3787
PR AE F + I N W P V++ G F + L G + LKVVLVG +AGKT++ GL K L RT GV++ P + + ++V +WDFAG YY THQ+FLT GAL +LVVD+ ++ D S D + WLD L RVPGSVVL+V TH+D F + S + ++ +E ++A+ +A + + DR DS P +L + G + L + D FP + ++P+ A ++A+R GA DP + VR LDG + F+ AL + GE K+ + T + + F AA L +RQ LV A G ++H+N AW +L+R ++D RL DP Q + + L H RF + G ++K Y++FLW RD++ EE +V ++ MF N H ++VP+ LP V C A+ + G + F + G VPPG+IP+ L + D ++ W RGV F + +++ + +E + G + K G + +VA L + +PG L FD + L+ G+L + + N + + R SN G E ++ + +A F+ + D+ R+L + +A V T + +LV V + + P PR + VL + G+ L L R+ FLCA D++ CG DG GY E++ + +W+K P K+ L + + V T
Sbjct: 166 PRAVAERFAVQN--VSIYTAENPWTEPPADVLELGMAYAARFLKDLNDFGRTSS-NRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPADCSKRDI----------MDRVGRECKSARERARQESAGNSDREYAGVQDSRRYQPLRIVVVD--ELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLD----EGQPFILFPEALSLFLEVAGE-----KSLFGGNAT---EGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKRQSP------ASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNKDH-----YIVPSCLPDHVGCTVDAKKLLGLDVGGAI-FSRKLQLGGEQPVPPGLIPRLLAWCSQGDARIT------TCWKRGVCFAFNRKHLVLLYEHRKEAGRSVIECHAMGSAHNE--KAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELAR-----KSNVIAGGVERHL---RKGQEEMATSFNHQIQQLGQDMSRKL-----DCIAAV------------------TSKCLLVSVEKDI-----PCPRLIMVLEDVSPGSALSRLSHFRRDMVDKLLRREGEGPAPQCY------------------------RIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVT 1009 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1550.3843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1550.3843.1 >prot_E-fasciculatus_F_contig1550.3843.1 ID=prot_E-fasciculatus_F_contig1550.3843.1|Name=mRNA_E-fasciculatus_F_contig1550.3843.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=966bp MPNSKRPAPTPAPSEQQPGSGGTSAGGDRGEEEEEKQQQAPYQGQGFDSMback to top mRNA from alignment at E-fasciculatus_F_contig1550:1640..15794- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1550.3843.1 ID=mRNA_E-fasciculatus_F_contig1550.3843.1|Name=mRNA_E-fasciculatus_F_contig1550.3843.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=14155bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1550:1640..15794- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1550:1640..15794- >mRNA_E-fasciculatus_F_contig1550.3843.1 ID=mRNA_E-fasciculatus_F_contig1550.3843.1|Name=mRNA_E-fasciculatus_F_contig1550.3843.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5796bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1550:1640..15794- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |