mRNA_E-fasciculatus_F_contig155.3841.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig155.3841.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI) HSP 1 Score: 1280 bits (3313), Expect = 0.000e+0 Identity = 749/852 (87.91%), Postives = 768/852 (90.14%), Query Frame = 1
Query: 76 MVDYSKWDNLDSDDSDSGSDGAXXXXXXXXXXXXXXXXXXXXXXTPSARKAADDKRQLDQAEALRLQGNSAYERGDVSKAIAAYDAQLRVLEGRKDEPAVEMTCGALLNQASGFIRLKNFKEAEVRCSRLLASATPRGGTKAYGGAEARTRALHFRGFARLRLGLFDGACSDLRSSLAAGTSSGEEARALLLEAEAGAAMASCPDPEAEGRELMRQGRGRDAAKSFGDAASRARRRKDAAGARAREGTVAT-VALSRNLRLEGIAVAMAGDPPSAEMLLRAALRELRAEGGGGXXXXXXXL--EEEGLTLAALGSLLAQRGKHADALKPLREAVAVLDEAIGKVSANEGGAANSSTDTNAGGSPPTPSSTEGRITALTRNLTGTLAFLGTSLLALEVQPSANDRSN--SKTTASSDGVTPGPIKEGAEKVTAAAPGYTCDDKGPIRADSAAEGSSKEAGEAIDVLKRAHEILKAETAAMAAAGPGQKGGSAGVYSAVGESRGEADVRKQTAKVLDTLSEAYAREKRWERARSAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGLEEASARWEEAATCFNDCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAGLFARERDEKTSSLKRAAAAVAAAQAPRDKTAQGSGNAEPVPPLPPPLVDSLEPDGRSRWELAEKEAFAWEGCAGAAGDDHEAAVRALSKADKLLNHASVSDKDERWTLRKVGVLHSLALALAQSGEHAMAENKLLEAIRELQELDGVDSDAEACAHKASGGTLTDLYKYLAIVRRARGDLTGAKEALAKVETLGGCEDREELEGLNRLLAESAVSVG 2616
MVDYSKWDNLDSDDS SGSDG XXXXXXXXXX PSARKAADDKRQLDQAEALRLQGNSAYE GDVSKAIAAYDAQLRVLEGRKDE AVEMTCGALLNQASGFI LK FKEAE RCSRLLASATPRGGTKAYGGAEARTRALHFRGFAR RLGLFDGACSDLRSSLAAGTSSG+EARALLLEAEAGAAM+SCPDPEAEGRE +RQGRGR+AAKSF DAASRARRRKDAAGA A EG VAT VALSRNLRLEGIAVAMAGDPPSAEMLLR ALR+LR G XXXXXXX EEEGLTLAALGSLLAQRGKHADAL+PLREAVAVLDEAI VSANEGG ANSS TNA SPPTPS TEGRITALTR LTGTLAFLGTSLLA EVQPSAN SN S TT SS GVTPG +K GAEKVT APG++CDDKGPI ADS GSSKEA EAIDVLKRAHE+LKAET AMA AGPGQKGG AGVYSAVGESRGEADVRKQTAKVLDTLSEAY REKRWERAR AAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAG EEASARWEEAATCF CAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAA LFARERDEKTSSLKRAA AVAAAQAPRDKTA+GSG+AEPVPPLPPPLVDSLEPDGRSRWELAE+EAFAWEG AGAAG+DHEAAV AL+KA+KLL+HASVSDKDERWTLRKVGVLHSLALALA+SGEHAMAENKLLEAIRELQ+LDGVDS AEAC HK GTLTDLYKYLAIVRRARGD GAK ALAKVETLGGCE EELEGLNRLLAESAVSVG
Sbjct: 1 MVDYSKWDNLDSDDSGSGSDGXXXXXXXXXXX-------------PSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSGGVTPGVMKGGAEKVTVPAPGFSCDDKGPIVADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHK---GTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSVG 836 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig155.3841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig155.3841.1 >prot_E-fasciculatus_F_contig155.3841.1 ID=prot_E-fasciculatus_F_contig155.3841.1|Name=mRNA_E-fasciculatus_F_contig155.3841.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=848bp MVDYSKWDNLDSDDSDSGSDGAAAAAAAAAAKSKQQQRRPQGGGTPSARKback to top mRNA from alignment at E-fasciculatus_F_contig155:22494..31063- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig155.3841.1 ID=mRNA_E-fasciculatus_F_contig155.3841.1|Name=mRNA_E-fasciculatus_F_contig155.3841.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8570bp|location=Sequence derived from alignment at E-fasciculatus_F_contig155:22494..31063- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig155:22494..31063- >mRNA_E-fasciculatus_F_contig155.3841.1 ID=mRNA_E-fasciculatus_F_contig155.3841.1|Name=mRNA_E-fasciculatus_F_contig155.3841.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5088bp|location=Sequence derived from alignment at E-fasciculatus_F_contig155:22494..31063- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |