mRNA_E-fasciculatus_F_contig15494.3838.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: D7G2F6_ECTSI (IFT81_CH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F6_ECTSI) HSP 1 Score: 288 bits (738), Expect = 4.580e-93 Identity = 171/191 (89.53%), Postives = 173/191 (90.58%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDVQEMEQLEYQLRRENEQTRQQIEKALADR 573
QAEFK THKQVDQ RNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQE+ AELGAKSIQQR QLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKL Q LPTEIGQ+ RKLEQLEREAAEPQRSREDVQEMEQL Y L QIEKALADR
Sbjct: 144 QAEFKATHKQVDQTRNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEEMAELGAKSIQQRGQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLTQVLPTEIGQRARKLEQLEREAAEPQRSREDVQEMEQLXYXLXXXXXXXXXQIEKALADR 334
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: A0A6H5JI50_9PHAE (IFT81_CH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI50_9PHAE) HSP 1 Score: 279 bits (714), Expect = 1.090e-86 Identity = 158/166 (95.18%), Postives = 161/166 (96.99%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDVQEM 498
QAEFK THKQVDQ RNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVS+EPGFAEMLDVTSRLRKAQEDT ELGAK++QQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKL Q LPTEIGQKTRKLEQLEREAAEPQRSREDVQEM
Sbjct: 130 QAEFKATHKQVDQTRNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSDEPGFAEMLDVTSRLRKAQEDTVELGAKAVQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLTQVLPTEIGQKTRKLEQLEREAAEPQRSREDVQEM 295
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: A0A7S3USE0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USE0_HETAK) HSP 1 Score: 137 bits (344), Expect = 4.690e-34 Identity = 93/191 (48.69%), Postives = 125/191 (65.45%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDVQEMEQLEYQLRRENEQTRQQIEKALADR 573
Q EFK HK VDQ R +DL+PGEL+ EI QLEDE+KQL +KI +LK V+ E GF ML TSRLR+ QE+ A+L ++ +QR QLHQAE RA DA RRL L+ G AS A ++L QL+ EVAAL + L E+ R+L++LE EPQ++REDV ++E + E ++ R+ +E+AL R
Sbjct: 145 QNEFKAVHKTVDQLRASDLKPGELKAEITQLEDERKQLADKIERLKRQVASEEGFEAMLAATSRLRQEQEEEAKLAERAREQRFQLHQAEARAADAGRRLAALKDGAAS-QNAESMLRQLEAEVAALARRSDVVLAGELSDARRRLQELEAARLEPQKTREDVDQLEAEVEHAQAECQELREAVEQALKQR 334
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: A0A7S2WFD8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD8_9STRA) HSP 1 Score: 116 bits (291), Expect = 8.020e-27 Identity = 74/163 (45.40%), Postives = 104/163 (63.80%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDV 489
Q +FK HKQ+DQ R+ RPGE++TEI LEDE+KQL KI +LK SEE GFA +L+ TS LR+ Q++ A LG +QR L A R ++ RL L++ + TA A+L QLQREV L ++ +P E+ Q+ ++L +L+ + EPQR+REDV
Sbjct: 196 QEQFKDVHKQLDQLRSQPSRPGEMKTEITTLEDERKQLLAKIERLKKQNSEEDGFAPLLEATSSLRQQQDEEARLGDNMRKQRMALQHAHQRNQEVSERLQALKRSQGANMTAEAMLQQLQREVMELQQRVEGVMPRELEQQNQRLVRLQEQMYEPQRTREDV 358
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: A0A836CMZ3_9STRA (Intraflagellar transport protein 81 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ3_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.350e-25 Identity = 70/127 (55.12%), Postives = 88/127 (69.29%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAAL 381
QA+FKVTHK VD R TDLRP ELR E+ QLE+E++QL EKI++ + EPGF EML VT RLR AQE+ A L ++ +QRA L QA+ + +RRL LR +ASA +A AVL QL+ EV AL
Sbjct: 146 QADFKVTHKAVDALRRTDLRPTELRAEVAQLEEERRQLGEKIARARRAADGEPGFEEMLAVTGRLRGAQEEEARLAERAREQRALLQQADQHLAEGQRRLQTLRAMSASARSADAVLAQLRGEVGAL 272
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: H3H301_PHYRM (IFT81_CH domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3H301_PHYRM) HSP 1 Score: 107 bits (266), Expect = 1.790e-23 Identity = 80/190 (42.11%), Postives = 109/190 (57.37%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDVQEMEQLEYQLRRENEQTRQQIEKALAD 570
Q +FK HK+VDQ R + RPGELR EI QLE+E +QLTEKI+ LK + +PGF E+L TS LRK QE+ A+LG + Q L AE RA +A RL LR + T + +LQ +VA ++ L P E + L++LER +EP ++ D+ +ME LRR T QQ + +AD
Sbjct: 146 QNQFKTVHKEVDQLRASKSRPGELRREIAQLEEESQQLTEKIANLKKKTTSDPGFQELLAATSALRKEQEEQAKLGEQKRDQMLSLSLAEKRAREADARLQDLRASLSQDATPEQLFERLQTQVARNNDILTTKFPAEFLMQQETLQRLERALSEPPKTEHDIADMEDEVQALRR----TIQQYQAQIAD 331
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: A0A0P1AN33_PLAHL (IFT81_CH domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN33_PLAHL) HSP 1 Score: 105 bits (262), Expect = 6.160e-23 Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDVQEME 501
Q +FKV HK+ DQ R + RPGELR EI QLE+E +QLTEKI+ LK + GF E+L TS LRK QE+ A+L + Q L AE RA++A RL LR + T + +LQ +VA L PTE K L++LER +EP+++ +D+ +ME
Sbjct: 146 QDKFKVVHKEADQLRTSKSRPGELRREISQLEEESQQLTEKIANLKKKTTSNSGFQEILAATSALRKEQEEQAKLAERKRDQMLSLSLAEKRAQEAEARLQDLRASLSQNATPEQLFERLQSQVARNKEILSIKFPTEFKTKQETLQRLERTLSEPRKTEQDIDDME 312
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: A0A067CQF6_SAPPC (IFT81_CH domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQF6_SAPPC) HSP 1 Score: 100 bits (248), Expect = 4.590e-21 Identity = 67/167 (40.12%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDVQEME 501
Q EFK HKQV+Q R + +RPGELR EI QLE+E QL+EKI+ LK + E GF ++L+ TS LRK QE+ A+L + Q L+ A+ R+ D +RLG +RQ + + QLQ +V + L+ P E + KL+ L+ +EP ++ D+ +ME
Sbjct: 144 QNEFKAAHKQVEQLRTSKIRPGELRKEITQLEEESHQLSEKIAHLKKKTANESGFKDILEATSALRKEQEEQAKLAERKRDQMMGLNMAQKRSRDYDQRLGEMRQSITTNMQPDQLFDQLQNQVDRHRDILINKFPAEFRLQQEKLQHLDAALSEPAKTEADIADME 310
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: A0A7S1XP79_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP79_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 8.590e-21 Identity = 71/187 (37.97%), Postives = 111/187 (59.36%), Query Frame = 1
Query: 7 EFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDVQEMEQLEYQLRRENEQTRQQIEKALA 567
EFK HK +DQ R+TD+RP ELR++I QLE+E++ L E+I L+ + GF EML+ T R AQED + + +QR L AE R E R R L+ + ++ + A+L QL+REV + LP + + +L++LE E ++PQRS++DV E++Q L + ++ R Q++K +A
Sbjct: 150 EFKKVHKALDQLRSTDMRPNELRSDIKQLEEERRLLVERIEGLRRGNEGKRGFPEMLEATKAFRLAQEDDQKQVGRREEQRTLLLAAEARLEKVRERERELQVTSGASGSPEAILEQLEREVGHSMERAQHELPRALKVRRSRLKELEHERSKPQRSKQDVMELQQFLRMLEDQLDEVRSQLDKTVA 336
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Match: A0A024UUZ4_9STRA (IFT81_CH domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UUZ4_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.430e-19 Identity = 68/167 (40.72%), Postives = 94/167 (56.29%), Query Frame = 1
Query: 1 QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEDTAELGAKSIQQRAQLHQAETRAEDARRRLGVLRQGTASATTAAAVLGQLQREVAALDNKLMQALPTEIGQKTRKLEQLEREAAEPQRSREDVQEME 501
Q EFKV+HKQV+Q R + +RPGELR EI QLE+E QL+EKI LK + E GF ++L+ TS LRK QE+ A+L + Q L+ AE R+ + RL +R + + QLQ +V + L+ P E + KL LE EP +S D+ +ME
Sbjct: 144 QNEFKVSHKQVEQLRTSKIRPGELRKEITQLEEESHQLSEKIMHLKKKTANESGFKDILEATSSLRKEQEEQAKLSERKRDQMMGLNIAEKRSREYEHRLNEMRAAINTDMQPDQLFDQLQTQVDRHRDILVNKFPAEFRIQQEKLHHLEAALNEPAKSESDIADME 310 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15494.3838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15494.3838.1 >prot_E-fasciculatus_F_contig15494.3838.1 ID=prot_E-fasciculatus_F_contig15494.3838.1|Name=mRNA_E-fasciculatus_F_contig15494.3838.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=191bp QAEFKVTHKQVDQARNTDLRPGELRTEIGQLEDEKKQLTEKISKLKANVSback to top mRNA from alignment at E-fasciculatus_F_contig15494:164..2644+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15494.3838.1 ID=mRNA_E-fasciculatus_F_contig15494.3838.1|Name=mRNA_E-fasciculatus_F_contig15494.3838.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2481bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15494:164..2644+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15494:164..2644+ >mRNA_E-fasciculatus_F_contig15494.3838.1 ID=mRNA_E-fasciculatus_F_contig15494.3838.1|Name=mRNA_E-fasciculatus_F_contig15494.3838.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1146bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15494:164..2644+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |