mRNA_E-fasciculatus_F_contig15492.3837.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15492.3837.1
Unique NamemRNA_E-fasciculatus_F_contig15492.3837.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: D7FRV3_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV3_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 5.180e-116
Identity = 201/288 (69.79%), Postives = 209/288 (72.57%), Query Frame = 1
Query:    1 PEGRNGGVCTEAGDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYITQDALAESLRGAPSACGTNGGLAASTDQTEPSGTASGPTASTAAAGA---VAAEDAKLARELFEAMDAEGSGRVGFSAFLAACLAGRPADEAGARVAFSWLDRRRKGAINAGDLKLVTGDV 855
            PE RNGGVC EAGDMWMLGALAWQVLTGPLPQPGM+Q++GWAT+MLGKPSFKSAGW +RSPEAVDFVSRLVQ                                                       ESCVMRR+GLRLVGRTLQAARLPPVKQAFRLLDP G GYITQDALAE LRGAP A   NGG A STDQ EPSGTASGP  + AAA A   V  E AKLARE+FEAMDAEGSGRVGFSAFLAACLAGRPADEAGARVAFSWLDRR KGAINAGDLKLVTGDV
Sbjct:  321 PEARNGGVCKEAGDMWMLGALAWQVLTGPLPQPGMSQQAGWATIMLGKPSFKSAGWASRSPEAVDFVSRLVQ-------------------------------------------------------ESCVMRRVGLRLVGRTLQAARLPPVKQAFRLLDPCGNGYITQDALAEGLRGAPYARSMNGGPATSTDQAEPSGTASGPRVAAAAAAAADTVEVEHAKLAREIFEAMDAEGSGRVGFSAFLAACLAGRPADEAGARVAFSWLDRRGKGAINAGDLKLVTGDV 553          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: A0A7N0VEB8_KALFE (Uncharacterized protein n=5 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VEB8_KALFE)

HSP 1 Score: 90.1 bits (222), Expect = 1.200e-16
Identity = 57/161 (35.40%), Postives = 81/161 (50.31%), Query Frame = 1
Query:   28 TEAGDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWL--RPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYIT 504
            TEA DMW +G +A+ +L G  P    T+   +  V+   PSF    W N SP+A+DFV RL+ KD  +R+TA +AL HPWL   P+ +                   L   +   + A+  S  +RR  L  + RTL  ++L  V++ F LL P   GYIT
Sbjct:  312 TEA-DMWSIGVIAYILLCGSRPFWSRTESGIFRAVLKADPSFDEGPWPNLSPDALDFVKRLLNKDYRKRLTAAQALSHPWLAGHPDTKV-----------------PLDMIVYRQVKAYICSSSLRRSALGALARTLSVSQLAYVREQFNLLGPNKSGYIT 454          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: A0A2C9UFN5_MANES (Protein kinase domain-containing protein n=5 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UFN5_MANES)

HSP 1 Score: 89.7 bits (221), Expect = 2.120e-16
Identity = 61/170 (35.88%), Postives = 86/170 (50.59%), Query Frame = 1
Query:    1 PEGRNGGVCTEAGDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLL--AFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYIT 504
            PE  +    TEA D+W +G +A+ +L G  P    T+   +  V+   PSF  A W + SPEA DFV RL+ KD  +RMTAV+AL HPW+R +                 N+ ++   I    L  A+  S  +RR  LR + +TL    L  +K+ F LL+P   G IT
Sbjct:  311 PEVLHRSYSTEA-DVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAKDFVKRLLNKDPRKRMTAVQALSHPWIRNH-----------------NDVKVPLDILIFRLVKAYMRSSSLRRAALRALSKTLSVDELYYLKEQFALLEPNQSGSIT 462          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: A0A1D6F2C0_MAIZE (CDPK-related kinase 1 n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6F2C0_MAIZE)

HSP 1 Score: 89.4 bits (220), Expect = 2.890e-16
Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 1
Query:    1 PEGRNGGVCTEAGDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYITQDALAESL 528
            PE  +    TEA DMW +G +A+ +L G  P    T+   +  V+  +PSF  A W   + EA DFV RL+ KD  +RMTA +AL HPW+R +++                   L   I   + A+  S  +R+  LR + +TL   +L  V++ F LL P   GYI+   L  +L
Sbjct:  313 PEVLHRSYATEA-DMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPTLTAEAKDFVKRLLNKDYRKRMTAAQALSHPWIRNSQQV---------------KVPLDMIIYKLMRAYISSSSLRKSALRALAKTLTTDQLFYVREQFELLGPNKNGYISLQNLKSAL 472          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: A0A453AY56_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453AY56_AEGTS)

HSP 1 Score: 88.6 bits (218), Expect = 3.220e-16
Identity = 56/164 (34.15%), Postives = 82/164 (50.00%), Query Frame = 1
Query:   37 GDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYITQDALAESL 528
            GDMW +G +A+ +L G  P    T+   +  V+  +PSF  A W   S EA DFV RL+ KD  +RMTA +AL HPW+R  ++                   L   I   + A+  S  +R+  LR + +TL A +L  +K+ F LL P   G+I+   L  +L
Sbjct:  106 GDMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPTLSAEAKDFVKRLLNKDYRKRMTASQALSHPWIRDAQQV---------------KIPLDMIIYKLIRAYISSSSLRKSALRALAKTLTANQLFYLKEQFELLGPNKSGFISLQNLKSAL 254          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: A0A0Q3GVI0_BRADI (Uncharacterized protein n=2 Tax=Pooideae TaxID=147368 RepID=A0A0Q3GVI0_BRADI)

HSP 1 Score: 88.2 bits (217), Expect = 4.560e-16
Identity = 56/164 (34.15%), Postives = 80/164 (48.78%), Query Frame = 1
Query:   37 GDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYITQDALAESL 528
            GDMW +G +A+ +L G  P    T+   +  V+   PSF    W   S EA DFV RL+ KD  +RMTA +AL HPW+R  ++                   L   I   + A+  S  +R+  LR + +TL A +L  +K+ F LL P   GYI+   L  +L
Sbjct:  156 GDMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPTMSAEAKDFVKRLLNKDYRKRMTAAQALSHPWIRNAQQV---------------KIPLDMIIYKLMRAYISSSSLRKSALRALAKTLTANQLFYLKEQFELLGPNKNGYISLQNLKSAL 304          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: A0A453AY96_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453AY96_AEGTS)

HSP 1 Score: 88.6 bits (218), Expect = 5.230e-16
Identity = 56/164 (34.15%), Postives = 82/164 (50.00%), Query Frame = 1
Query:   37 GDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYITQDALAESL 528
            GDMW +G +A+ +L G  P    T+   +  V+  +PSF  A W   S EA DFV RL+ KD  +RMTA +AL HPW+R  ++                   L   I   + A+  S  +R+  LR + +TL A +L  +K+ F LL P   G+I+   L  +L
Sbjct:  324 GDMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPTLSAEAKDFVKRLLNKDYRKRMTASQALSHPWIRDAQQV---------------KIPLDMIIYKLIRAYISSSSLRKSALRALAKTLTANQLFYLKEQFELLGPNKSGFISLQNLKSAL 472          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: A0A1D6IKZ7_MAIZE (CDPK-related kinase 1 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6IKZ7_MAIZE)

HSP 1 Score: 87.4 bits (215), Expect = 5.460e-16
Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 1
Query:   28 TEAGDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYITQDALAESL 528
            TEA DMW +G +A+ +L G  P    T+   +  V+  +PSF  A W   + EA DFV RL+ KD  +RMTA +AL HPW+R  ++                   L   I   + A+  S  +R+  LR + +TL   +L  V++ F LL P   GYI+   L  +L
Sbjct:   92 TEA-DMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPTLTAEAKDFVKRLLNKDYRKRMTAAQALSHPWIRNAQQV---------------KVPLDMIIYKLMRAYISSSSLRKSALRALAKTLTTNQLFYVREQFELLGPNKNGYISLQNLKSAL 242          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: J3MNG6_ORYBR (Uncharacterized protein n=5 Tax=Oryza TaxID=4527 RepID=J3MNG6_ORYBR)

HSP 1 Score: 88.2 bits (217), Expect = 6.140e-16
Identity = 57/167 (34.13%), Postives = 85/167 (50.90%), Query Frame = 1
Query:   28 TEAGDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYITQDALAESL 528
            TEA DMW +G +A+ +L G  P    T+   +  V+  +PSF  A W   + EA DFV RL+ KD  +RMTA +AL HPW+R +++                   L   I   + A+  S  +R+  LR + +TL A +L  +++ F LL P   GYI+   L  +L
Sbjct:  234 TEA-DMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPTLTAEAKDFVKRLLNKDYRKRMTAAQALSHPWIRNSQQV---------------KIPLDMLIYKLMRAYISSSSLRKSALRALAKTLTANQLFYLREQFELLGPNKNGYISLQNLKATL 384          
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Match: UPI001CB9174B (CDPK-related protein kinase-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9174B)

HSP 1 Score: 88.2 bits (217), Expect = 7.030e-16
Identity = 58/176 (32.95%), Postives = 85/176 (48.30%), Query Frame = 1
Query:    1 PEGRNGGVCTEAGDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPSFKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAVAGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLPPVKQAFRLLDPYGKGYITQDALAESL 528
            PE  +    TEA D+W +G +A+ +L G  P    T+   +  V+   PSF+   W   SPEA DFV RL+ KD  +RMTA +AL HPW+R                       L  SI   +  +  S  +R+  +R + +TL A  L  +K+ F LL+P   G I+ D +  +L
Sbjct:  307 PEVLHRSYSTEA-DVWSIGVIAYILLCGSRPFWARTESGIFRAVLKAHPSFEEVPWPTLSPEAKDFVKRLLNKDPRKRMTAAQALSHPWIRSTNDV---------------KLPLDVSILRHMKGYMRSSALRKAAIRALVKTLTADELVYLKEQFSLLEPSKNGSISIDNIKVAL 466          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15492.3837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRV3_ECTSI5.180e-11669.79N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV3_ECT... [more]
A0A7N0VEB8_KALFE1.200e-1635.40Uncharacterized protein n=5 Tax=Kalanchoe fedtsche... [more]
A0A2C9UFN5_MANES2.120e-1635.88Protein kinase domain-containing protein n=5 Tax=C... [more]
A0A1D6F2C0_MAIZE2.890e-1633.52CDPK-related kinase 1 n=3 Tax=Zea mays TaxID=4577 ... [more]
A0A453AY56_AEGTS3.220e-1634.15Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
A0A0Q3GVI0_BRADI4.560e-1634.15Uncharacterized protein n=2 Tax=Pooideae TaxID=147... [more]
A0A453AY96_AEGTS5.230e-1634.15Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A1D6IKZ7_MAIZE5.460e-1634.13CDPK-related kinase 1 n=1 Tax=Zea mays TaxID=4577 ... [more]
J3MNG6_ORYBR6.140e-1634.13Uncharacterized protein n=5 Tax=Oryza TaxID=4527 R... [more]
UPI001CB9174B7.030e-1632.95CDPK-related protein kinase-like n=1 Tax=Erigeron ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15492contigE-fasciculatus_F_contig15492:511..3015 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score92.8
Seed ortholog evalue2.8e-16
Seed eggNOG ortholog3983.cassava4.1_004178m
KEGG koko:K00924
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0004713,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009755,GO:0009931,GO:0009937,GO:0009939,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0010857,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018108,GO:0018193,GO:0018209,GO:0018212,GO:0019538,GO:0023051,GO:0023052,GO:0023056,GO:0032870,GO:0033993,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046777,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071704,GO:0071944,GO:0097305,GO:0097306,GO:0140096,GO:1901564,GO:1901700,GO:1901701
EggNOG free text desc.CDPK-related kinase
EggNOG OGs37JQ3@33090,3GBFT@35493,4JHI6@91835,KOG0032@1,KOG0032@2759
COG Functional cat.T
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-23_004060.1
Exons4
Model size882
Cds size882
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15492.3837.1prot_E-fasciculatus_F_contig15492.3837.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15492 511..3015 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928025.665389-CDS-E-fasciculatus_F_contig15492:510..8701622928025.665389-CDS-E-fasciculatus_F_contig15492:510..870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15492 511..870 -
1695995793.3669403-CDS-E-fasciculatus_F_contig15492:510..8701695995793.3669403-CDS-E-fasciculatus_F_contig15492:510..870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15492 511..870 -
1622928025.680302-CDS-E-fasciculatus_F_contig15492:1625..17661622928025.680302-CDS-E-fasciculatus_F_contig15492:1625..1766Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15492 1626..1766 -
1695995793.3781502-CDS-E-fasciculatus_F_contig15492:1625..17661695995793.3781502-CDS-E-fasciculatus_F_contig15492:1625..1766Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15492 1626..1766 -
1622928025.6939874-CDS-E-fasciculatus_F_contig15492:2343..25081622928025.6939874-CDS-E-fasciculatus_F_contig15492:2343..2508Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15492 2344..2508 -
1695995793.388751-CDS-E-fasciculatus_F_contig15492:2343..25081695995793.388751-CDS-E-fasciculatus_F_contig15492:2343..2508Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15492 2344..2508 -
1622928025.709072-CDS-E-fasciculatus_F_contig15492:2799..30151622928025.709072-CDS-E-fasciculatus_F_contig15492:2799..3015Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15492 2800..3015 -
1695995793.3969643-CDS-E-fasciculatus_F_contig15492:2799..30151695995793.3969643-CDS-E-fasciculatus_F_contig15492:2799..3015Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15492 2800..3015 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15492.3837.1

>prot_E-fasciculatus_F_contig15492.3837.1 ID=prot_E-fasciculatus_F_contig15492.3837.1|Name=mRNA_E-fasciculatus_F_contig15492.3837.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=294bp
PEGRNGGVCTEAGDMWMLGALAWQVLTGPLPQPGMTQESGWATVMLGKPS
FKSAGWTNRSPEAVDFVSRLVQKDVAQRMTAVEALEHPWLRPNRRSAGAV
AGAAGAAAAGNNGQLSSSIRASLLAFKESCVMRRIGLRLVGRTLQAARLP
PVKQAFRLLDPYGKGYITQDALAESLRGAPSACGTNGGLAASTDQTEPSG
TASGPTASTAAAGAVAAEDAKLARELFEAMDAEGSGRVGFSAFLAACLAG
RPADEAGARVAFSWLDRRRKGAINAGDLKLVTGDVSILALLYV*
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mRNA from alignment at E-fasciculatus_F_contig15492:511..3015-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15492.3837.1 ID=mRNA_E-fasciculatus_F_contig15492.3837.1|Name=mRNA_E-fasciculatus_F_contig15492.3837.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2505bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15492:511..3015- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGGAGGGTCGAAATGGAGGCGTTTGCACGGAGGCGGGAGACATGTGGAT GCTGGGCGCGCTTGCCTGGCAAGTGCTGACGGGACCTCTGCCGCAGCCAG GGATGACGCAGGAGTCCGGGTGGGCGACCGTCATGCTCGGGAAGCCCTCG TTCAAGAGCGCGGGGTGGACGAACCGGTCGCCCGAGGCAGTCGATTTCGT GTCGCGACTTGTGCAGGTAGGTGTGGTGTGGTGTGGTGTAAAGCCATGCT ACCGCAGTTTTCAACATGTGGCGTCTCCTTGCTAAAGTGGTTGCGTGCAT GGTCGTGGTCGCGTTCATAAATATCTGGCGACTACATACTCTTGTACTGT GCTGTGTTTGCGTATACCTAAGGGTTGACACGATGACACGATGTCTGTAC TAATGATGTCTTGTCTTCATTGACATTGCTACAGTAGCACCCATTGACTT GACCGCTCAAACCGGTGTTGTGTTGTGTTGTGTGTGTGCGTGTGTTTCCG AGGACAGAAGGACGTTGCTCAACGGATGACTGCGGTGGAGGCGTTGGAAC ACCCGTGGCTTCGTCCGAATCGCCGGTCTGCTGGTGCTGTTGCTGGTGCT GCTGGTGCTGCTGCCGCTGGAAACAACGGCCAGCTGTCTTCGAGCATTCG CGCGTCGCTGCTAGCGTTCAAGGTGCCTCTCTTCCCTTCATGTTGTGTCC TTTGGTATGGTGTGCTCGGGTGTATTTTGCTCGCACACTAGATGTGCAGC ATCGGCGGCCATAATTTTTGCGACCTTTCGTAGATGTTGCTGCTGCCGTA CAACTTCAATGGATGTTCTGGATGTTCTTGAGTGTTTTTAGAGCTAGGGT TAGTAGCCCCATTGACTGCCGGACTATTTTTAGAAAACGTAAGGGAGGCC TTAAGGCCACACAGTTCATTCCAACAATCGCACATGTGAGTTCATCTGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGA GGGGTACGGTAAGGGTTAGTCGCCCATAACCCGAACCCGAACCCGAACCC TAGCCTCTTCTCTTCTCTTCTTCTCTTCTCCTCTACTGCATTCGTTCGAG GTTTGGACGAGATAAAACATTCGTGCCTCGCCCTCCTCATGTCGGCGTCG GCCCTGTCACAGCTTCATTCCACGATGCTCGTTTTATTTCACCCACCCAC GCCCCGCAACATCCTTTGTCCTCGTGTGTTTTCCCATGTTACGTTACAGG AGAGCTGCGTGATGCGGAGGATCGGGCTGCGACTCGTGGGCCGCACTCTG CAGGCGGCGAGACTGCCTCCCGTTAAGCAGGCGTTTCGGCTGCTGGACCC TTACGGCAAGGGATACATCACTCAAGACGCCCTCGCCGAGGTAGGTACTT CTTTGTTTTGTTTTCCTCACTGAAGATATCTTTATTTTCACAGCATTTCT GCTTGGTAGGAGCCCCATTCCGAACGTGTAGATTGATTTTGTTTCAGCGT TGATTTGAATGTGGTTGGGTTTGGCGTCCCAACTCCACGGACACGGAGTG TTGTGACTCACTCCCTGCTGTGGTGGACAGCGTTGCTCGTGAGTTTGTCA AGTATTGCATGTACGCCAGCAACACGGTAGCATCGTACGGTATGTAGTCG GCGATAAGGAGGGGAGGAGGCGGTGCATGGACAAGGACATGGACATGGAC ATGGACATGGACAGTCACGACCTGCCTTGGAGCTTTTTATGGAGGAGGAG AGGAGGTTCACTACCGGCATTCTGTCCGTTCTGATAATACATTGCATTGT ATTGATGCCGTCGTCGCCATCGATGTGTTTTTCTGTACCACATGTTCCCG AACAGAAGAAAAGATTTCCTGAAGACCTTGCACCCCACACGGCACCCGCG CACTCCCACTGCTGCATGTCCCATTCCCCCGGTGCCCTTGCGGGCGGTGG GGATAGGATAAGGATAGCACCTCCCGTACTTGGTGCCGTAGAAATCCTTT TCTTGAAACCTCATCACCTCTAAAGCTCTAAAGTAAGGTTGTCATCCCCG CAGAATCGCCGTGCTTACCTACCCACCCTTTTTACCGGGACCGTCGCCTC CTCCTCCTGCTCTTTCTTATGCACGCTGCTTCTGCTGCTGTGCAGAGCCT GAGAGGCGCACCGTCTGCGTGCGGCACGAACGGGGGACTCGCCGCTAGCA CCGACCAAACTGAGCCTTCCGGCACGGCTTCAGGGCCGACAGCGTCAACG GCTGCAGCAGGCGCCGTGGCAGCGGAGGATGCTAAGCTTGCACGCGAGCT GTTCGAGGCGATGGACGCGGAAGGGTCTGGTCGCGTGGGTTTCAGCGCGT TTTTGGCGGCGTGTTTGGCCGGACGGCCCGCGGATGAGGCGGGGGCGAGG GTGGCGTTCAGCTGGCTGGACAGGAGGAGAAAGGGCGCCATCAACGCGGG GGATCTCAAGCTCGTCACGGGGGACGTGAGTATCCTCGCGCTGTTGTACG TGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15492:511..3015-

>mRNA_E-fasciculatus_F_contig15492.3837.1 ID=mRNA_E-fasciculatus_F_contig15492.3837.1|Name=mRNA_E-fasciculatus_F_contig15492.3837.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1764bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15492:511..3015- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGGAGGGTCGAAATGGAGGCGTTTGCACGGAGGCGGGAGACATGTGGAT
GCTGGGCGCGCTTGCCTGGCAAGTGCTGACGGGACCTCTGCCGCAGCCAG
GGATGACGCAGGAGTCCGGGTGGGCGACCGTCATGCTCGGGAAGCCCTCG
TTCAAGAGCGCGGGGTGGACGAACCGGTCGCCCGAGGCAGTCGATTTCGT
GTCGCGACTTGTGCAGCCGGAGGGTCGAAATGGAGGCGTTTGCACGGAGG
CGGGAGACATGTGGATGCTGGGCGCGCTTGCCTGGCAAGTGCTGACGGGA
CCTCTGCCGCAGCCAGGGATGACGCAGGAGTCCGGGTGGGCGACCGTCAT
GCTCGGGAAGCCCTCGTTCAAGAGCGCGGGGTGGACGAACCGGTCGCCCG
AGGCAGTCGATTTCGTGTCGCGACTTGTGCAGAAGGACGTTGCTCAACGG
ATGACTGCGGTGGAGGCGTTGGAACACCCGTGGCTTCGTCCGAATCGCCG
GTCTGCTGGTGCTGTTGCTGGTGCTGCTGGTGCTGCTGCCGCTGGAAACA
ACGGCCAGCTGTCTTCGAGCATTCGCGCGTCGCTGCTAGCGTTCAAGAAG
GACGTTGCTCAACGGATGACTGCGGTGGAGGCGTTGGAACACCCGTGGCT
TCGTCCGAATCGCCGGTCTGCTGGTGCTGTTGCTGGTGCTGCTGGTGCTG
CTGCCGCTGGAAACAACGGCCAGCTGTCTTCGAGCATTCGCGCGTCGCTG
CTAGCGTTCAAGGAGAGCTGCGTGATGCGGAGGATCGGGCTGCGACTCGT
GGGCCGCACTCTGCAGGCGGCGAGACTGCCTCCCGTTAAGCAGGCGTTTC
GGCTGCTGGACCCTTACGGCAAGGGATACATCACTCAAGACGCCCTCGCC
GAGGAGAGCTGCGTGATGCGGAGGATCGGGCTGCGACTCGTGGGCCGCAC
TCTGCAGGCGGCGAGACTGCCTCCCGTTAAGCAGGCGTTTCGGCTGCTGG
ACCCTTACGGCAAGGGATACATCACTCAAGACGCCCTCGCCGAGAGCCTG
AGAGGCGCACCGTCTGCGTGCGGCACGAACGGGGGACTCGCCGCTAGCAC
CGACCAAACTGAGCCTTCCGGCACGGCTTCAGGGCCGACAGCGTCAACGG
CTGCAGCAGGCGCCGTGGCAGCGGAGGATGCTAAGCTTGCACGCGAGCTG
TTCGAGGCGATGGACGCGGAAGGGTCTGGTCGCGTGGGTTTCAGCGCGTT
TTTGGCGGCGTGTTTGGCCGGACGGCCCGCGGATGAGGCGGGGGCGAGGG
TGGCGTTCAGCTGGCTGGACAGGAGGAGAAAGGGCGCCATCAACGCGGGG
GATCTCAAGCTCGTCACGGGGGACGTGAGTATCCTCGCGCTGTTGTACGT
GTGAAGCCTGAGAGGCGCACCGTCTGCGTGCGGCACGAACGGGGGACTCG
CCGCTAGCACCGACCAAACTGAGCCTTCCGGCACGGCTTCAGGGCCGACA
GCGTCAACGGCTGCAGCAGGCGCCGTGGCAGCGGAGGATGCTAAGCTTGC
ACGCGAGCTGTTCGAGGCGATGGACGCGGAAGGGTCTGGTCGCGTGGGTT
TCAGCGCGTTTTTGGCGGCGTGTTTGGCCGGACGGCCCGCGGATGAGGCG
GGGGCGAGGGTGGCGTTCAGCTGGCTGGACAGGAGGAGAAAGGGCGCCAT
CAACGCGGGGGATCTCAAGCTCGTCACGGGGGACGTGAGTATCCTCGCGC
TGTTGTACGTGTGA
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