mRNA_E-fasciculatus_F_contig1549.3836.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: D8LTQ3_ECTSI (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ3_ECTSI) HSP 1 Score: 268 bits (685), Expect = 4.060e-84 Identity = 178/198 (89.90%), Postives = 182/198 (91.92%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVEGEPEAAAEAAPTXXXXXXXXXXXXXXXXXX---EAAPAXXXXXXXXX------AAPVEQPPAPVSSPEGLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQPLDP 569
ALSPTMTHGNIG+WGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAV+GEPEAAA XXXXXXXXXXXXXXXXXX EAAPA XXXXXXXX AAPVE+PPAPVSSPE LVFKRDWGSGVRGSALAHRMSAEQKKY+ERFGSTLQQPLDP
Sbjct: 25 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVQGEPEAAAXXXXXXXXXXXXXXXXXXXXXXXPAPEAAPAPXXXXXXXXXXXXTTAAPVERPPAPVSSPE-LVFKRDWGSGVRGSALAHRMSAEQKKYVERFGSTLQQPLDP 221
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A6H5KR44_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR44_9PHAE) HSP 1 Score: 263 bits (673), Expect = 6.090e-82 Identity = 172/196 (87.76%), Postives = 176/196 (89.80%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVEGEPEAAA---EAAPTXXXXXXXXXXXXXXXXXXEAAPAXXXXXXXXXAAP----VEQPPAPVSSPEGLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQPLDP 569
ALSPTMTHGNIG+WGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAV+GEPEAAA EAAPT XXXXXXX XXXXXX EA XXXXXXXXX VEQPPAPVSS E LVFKRDWGSGVRGSALAHRMSAEQKKY++RFGSTLQQPLDP
Sbjct: 53 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVQGEPEAAAPAAEAAPTPXXXXXXXAAKXXXXXXPEAXXXXXXXXXXXXXXXXXXSVEQPPAPVSSQE-LVFKRDWGSGVRGSALAHRMSAEQKKYVKRFGSTLQQPLDP 247
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A836CM78_9STRA (Putative dihydrolipoyllysineresidue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM78_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.530e-31 Identity = 97/200 (48.50%), Postives = 116/200 (58.00%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVEGEPE-------AAAEAAPTXXXXXXXXXXXXXXXXXXEAAPAXXXXXXXXXAAPVEQ--------PPAPVSSPEGLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQ 557
ALSPTM HGN+ W K GDEIAAGD++C+VETDKATVDF+AQD+ F+AK LV G Q I VG PI +TV+D DSVAAF+ +EA A + P AA P XXX P XXXXXXXXX A + P AP +P V +WG V S L +R+S EQK Y RFG+TLQ+
Sbjct: 47 ALSPTMEHGNLAKWLKAAGDEIAAGDIICQVETDKATVDFEAQDEGFVAKLLVPEGAQSITVGDPILITVEDKDSVAAFESYEAPATKEAPXXXXXXXXVAAATPPAVSPXXXAEAPKVEAVKPKTMPPPXXXXXXXXXXAKATEAAKSAQKAPDAPAGAPTASV---NWGQRVSRSPLYYRLSQEQKLYSSRFGATLQE 243
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A485LRT4_9STRA (Aste57867_24277 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRT4_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.540e-26 Identity = 81/212 (38.21%), Postives = 103/212 (48.58%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVEGEPEAAAEAAPTXXXXXXXXXXXXXXXXXXEAAPAXXXXXXXXXAAP---VEQP--PAPVSSPE-------------------GLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQPLD 566
ALSPTM GN+ W +EGD I+AGDV+C++ETDKA VD++AQDD F+A+ LV G + I VG PI VTVD AD VAAFKDF A+ AA A AP P V P PAPV++P L WG GV SA++H ++ QK Y+ +GST P++
Sbjct: 38 ALSPTMEQGNLAKWNLKEGDAISAGDVICQIETDKAIVDYEAQDDMFLARILVPEGAEGIVVGQPIMVTVDSADDVAAFKDFVADV------AATPAPAPKSPEEIPPKKHEVKVDPATQAPVVPMDFLVTSQTPQKIVAGPAIPAPVATPATXXXXXXXXXXXXXXXXXANLASFSKWGLGVNKSAISHSLAQRQKAYVALYGSTGTFPIE 243
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A7S2DWD0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWD0_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.190e-26 Identity = 100/187 (53.48%), Postives = 118/187 (63.10%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVEGEPEAAAEAAPTXXXXXXXXXXXXXXXXXXEAAPAXXXXXXXXXAAPVEQPPAPVSSPEGLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQPL 563
ALSPTM G I W K GDEIAAGDVVC++ETDKATVDF+AQD+S +AK LVEAG + + VG PI V VD+ D VAAF DF EA A XXXXXXXXXXX XXXXXXXXX A V P ++ FKR WG+ V S LA +M+ +Q +YI ++GSTLQ P+
Sbjct: 51 ALSPTMEMGTIAEWLKAPGDEIAAGDVVCQIETDKATVDFEAQDESVLAKILVEAGAE-VPVGVPICVMVDEVDDVAAFSDFVVEAXXXXXXXXXXTAAPVVTAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXADVAPPQVTTTT---YAFKR-WGTKVSTSPLATKMAKDQIEYISKYGSTLQVPI 232
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A484DRZ7_BRELC (Lipoyl-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRZ7_BRELC) HSP 1 Score: 117 bits (292), Expect = 2.190e-26 Identity = 71/192 (36.98%), Postives = 102/192 (53.12%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVEGEPEAAA--EAAPTXXXXXXXXXXXXXXXXXXEAAP---AXXXXXXXXXAAPVEQPPAPVSSPEGLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQPL 563
+LSPTM GN+ W +EGD I+AGD+VCE+ETDKA VD++A DD F+AK L+ GT+++ VG P+ V VD+ DS+AAF+DF+ E P A + EA P E + AAP+ + A S+P K WG ++ SA + + Q+ YI ++G T P+
Sbjct: 36 SLSPTMETGNMSKWNIKEGDAISAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENVPVGQPMMVVVDEEDSLAAFEDFKLEEASEPPAAPSHIEAKPAQKENVPMDMKAQDGPKSLETKTTNVSEASFPPPHVAAPIAKTTASSSTPSTAFLKESWGFNMKNSATSTSLLKRQQAYIAQYGLTGMTPV 227
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A7R9WUM2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUM2_9STRA) HSP 1 Score: 117 bits (292), Expect = 7.670e-26 Identity = 92/190 (48.42%), Postives = 121/190 (63.68%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVEGEPEAAAEAAPTXXXXXXXXXXXXXXXXXXEAAPAXXXXXXXXXAAPVEQPPAPVSSPEGLVFKRDWGSGVR-GSALAHRMSAEQKKYIERFGSTLQQPLDP 569
ALSPTM G + W +EG E AGD + ++ETDKA++DF+AQDD ++AK L +AG +D+ VGTPI VTV++ + VAAFKDF A A E E AA XXXXXXXXXXXXXXX AA XX AA + + APV S WG + S +A ++ +Q++YIE++G+T Q+PLDP
Sbjct: 107 ALSPTMDQGTLAEWYLEEGSEFIAGDALAKIETDKASIDFEAQDDGYIAKILKDAGAEDVPVGTPILVTVEEEEDVAAFKDFVAPAAEPEAAAAPXXXXXXXXXXXXXXXXXXXXVVAAAAXPVVDAVXXPSAADMLEAVAPVLS-------TGWGRLAQINSPIAKSLAKKQQEYIEKYGTTGQKPLDP 289
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A0P1AE60_PLAHL (Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE60_PLAHL) HSP 1 Score: 115 bits (287), Expect = 1.060e-25 Identity = 70/190 (36.84%), Postives = 103/190 (54.21%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDF---EAEAVEGEPEAAAEAAPTXXXXXXXXXXXXXXXXXXEAAPAXXXXXXXXXAAPVEQPPAPVSSPEGLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQPL 563
+LSPTM GN+ W +EGD I AGD+VCE+ETDKA VD++A DD F+AK L+ GT++I VG P+ V V+D +SVAAFKDF EA P ++ + + E +P + +PVS+ VF+ WG G++ SA++ + +Q+ YI ++G T P+
Sbjct: 39 SLSPTMETGNMSKWNTKEGDAITAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENIPVGQPMMVVVEDQESVAAFKDFKLDEASVAPATPVSSKKPSNKSRSEPAMPQPSQKASPPMEVSPPTKTIEHTSTVLTNAKASSPVSATT-TVFEEKWGFGIKKSAISTSLLKKQQLYIAQYGVTGMTPV 227
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A6A4A4E2_9STRA (Lipoyl-binding domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A4E2_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.850e-25 Identity = 78/205 (38.05%), Postives = 104/205 (50.73%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVEGEPEAAA-----------EAA-------PTXXXXXXXXXXXXXXXXXXEAAPAXXXXXXXXXAAPVEQPPAPVSSPEGLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQPL 563
ALSPTM GN+ W +EGD I AGD+VCE+ETDKA VD++A DD F+AK L+ GT++I VG P+ V D+ +SVAAFKDF+ E P A E A P A PA AAP + APV+S VF+ WG G++ SA++ + +Q+ YI +G T P+
Sbjct: 39 ALSPTMETGNMSKWNLKEGDAITAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENIPVGQPMMVVCDEEESVAAFKDFKLEDAPAAPAAPVLSGEEKPPKKEEVAVDVKTHEPVVPQDFLVTSQTTKKTVPGPAIPASPVAK----AAPAPKAAAPVAS---AVFEEKWGLGIKKSAISTSLIKKQQAYISLYGITGMTPV 236
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Match: A0A1V9YB35_9STRA (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB35_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.490e-25 Identity = 73/209 (34.93%), Postives = 102/209 (48.80%), Query Frame = 3
Query: 3 ALSPTMTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEA--------------------VEGEPEAAAEAAPTXXXXXXXXXXXXXXXXXXEAAPAXXXXXXXXXAAPVEQPPAPVSSPEGLVFKRDWGSGVRGSALAHRMSAEQKKYIERFGSTLQQPLDP 569
ALSPTM GN+ W +EGD IAAGD++C++ETDKA VD++AQDD F+A+ LV GT+ I VG PI +TVDDA +V AF DF +A V+ +P A AP PA AP P ++ L WG G++ S +++ + QK Y+ +G+T P++P
Sbjct: 32 ALSPTMEQGNLAKWNMKEGDAIAAGDIICQIETDKAIVDYEAQDDMFLARILVPEGTEGITVGQPIMITVDDAANVGAFADFVVDAAAVPTPAPKSPEEIPPKKEEVKVDP---ATNAPVAPADFLVTSQVPQKTVPGPTIPAPVAAPVAATXAPKAAXXXPATTSATLASFEKWGRGIQKSPISNSLLLRQKAYLALYGTTGTFPVEP 237 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1549.3836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1549.3836.1 >prot_E-fasciculatus_F_contig1549.3836.1 ID=prot_E-fasciculatus_F_contig1549.3836.1|Name=mRNA_E-fasciculatus_F_contig1549.3836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp MTHGNIGAWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAback to top mRNA from alignment at E-fasciculatus_F_contig1549:14441..16768- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1549.3836.1 ID=mRNA_E-fasciculatus_F_contig1549.3836.1|Name=mRNA_E-fasciculatus_F_contig1549.3836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2328bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1549:14441..16768- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1549:14441..16768- >mRNA_E-fasciculatus_F_contig1549.3836.1 ID=mRNA_E-fasciculatus_F_contig1549.3836.1|Name=mRNA_E-fasciculatus_F_contig1549.3836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1110bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1549:14441..16768- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |