mRNA_E-fasciculatus_F_contig15471.3828.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15471.3828.1
Unique NamemRNA_E-fasciculatus_F_contig15471.3828.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: D7FVZ4_ECTSI (Ferredoxin nitrite reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ4_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 1.510e-138
Identity = 201/212 (94.81%), Postives = 208/212 (98.11%), Query Frame = 1
Query:   46 SGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVEYVKGVDSAFEPQPAAPAPEEAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAED 681
            +GMDNVRNMVGSPIAGLDP EMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIA+SGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQ+DTV FCKGMLLAFR+LGSRK RQ+ARLMFMIEE+GMEKFRETVVEYVKGVDSAFEPQPAAPAPEEAFSRR+YVGVHPQKQEGKSWVCVTTPAGRL AED
Sbjct:  251 TGMDNVRNMVGSPIAGLDPLEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAISGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQNDTVAFCKGMLLAFRNLGSRKKRQEARLMFMIEEMGMEKFRETVVEYVKGVDSAFEPQPAAPAPEEAFSRRNYVGVHPQKQEGKSWVCVTTPAGRLMAED 462          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: R7QAL9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAL9_CHOCR)

HSP 1 Score: 269 bits (688), Expect = 7.930e-84
Identity = 134/217 (61.75%), Postives = 164/217 (75.58%), Query Frame = 1
Query:   46 SGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVE-----YVKGVDSAFEPQPAAPAPEEAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAED 681
            SGMDNVRNMVGSPIAG+DP+E+VDTR+LC  INDMIT+NR+GNPALTNLPRK NI VSG RDD+AHT IND+GL P  HP T E+GFNVV+GGFFS++R AE+IP+D+W+   D V FC+ +L+ FRD G RKNR  +RLM+M++++ M  FRE + E     + + VD   E   A PAP     RR+ +GVH QKQEG SWVC   PAGRLTAED
Sbjct:  200 SGMDNVRNMVGSPIAGIDPEEIVDTRELCIAINDMITNNRRGNPALTNLPRKFNICVSGSRDDFAHTHINDVGLVPMVHPTTKEVGFNVVIGGFFSIKRNAEAIPMDVWLPYKDVVRFCETLLIWFRDNGDRKNRMSSRLMYMVDKLTMSGFREVIQEEFGSKFRRAVDGGEEY--ATPAP-----RRNVLGVHAQKQEGLSWVCGNVPAGRLTAED 409          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: A0A2V3J4B2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4B2_9FLOR)

HSP 1 Score: 266 bits (681), Expect = 2.690e-83
Identity = 131/213 (61.50%), Postives = 162/213 (76.06%), Query Frame = 1
Query:   46 SGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVEYVKG-VDSAFEPQPAAPAPEEAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAED 681
            SGMDNVRN+VGSP+AG+DP EMVDTRQLC++INDMITD+RKG P LTNLPRK NIAVSG RDD+AHT INDIGL P AHP+T  IGFNVV+GGFFS++R AE++P+D+W+ QSD V FC+ +LL FRD G RKNRQ  RLM+M++++GM+ FR+ +   +   +  A +  P    P E   RR+ +GVHPQKQ G SWV    PAGRL   D
Sbjct:  152 SGMDNVRNLVGSPLAGIDPLEMVDTRQLCHDINDMITDSRKGRPQLTNLPRKFNIAVSGSRDDFAHTHINDIGLVPMAHPQTAHIGFNVVIGGFFSIKRDAEALPMDVWLPQSDVVRFCETVLLWFRDHGDRKNRQATRLMYMVDQLGMKTFRDQIESAMGAPLQRAVKGGPEYDQPAE---RRNVLGVHPQKQPGLSWVAACVPAGRLETAD 361          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: A0A7S0D8G4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D8G4_9EUKA)

HSP 1 Score: 250 bits (639), Expect = 1.510e-76
Identity = 127/224 (56.70%), Postives = 165/224 (73.66%), Query Frame = 1
Query:   37 NNHSGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVEYVKGVDSAFEPQPAA-----PAPEEA--FSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAEDVS 687
            N  SGMDNVRN+VG+PIAGLDP EM+DTR LC  INDMIT++ KGNPA+TNLPRK NIAVSG RDD+AHT INDIGL P  + ETGE+GFNV+VGG+FS++R  ESIP+D+W+K  D   FC+ ML  FRD G R +RQKARL+++IE+ G++KFR+TV E     D+ F  +  A     P P +   +++RD +GVH QKQ+G S+V V  P GR+  ++ +
Sbjct:  178 NVQSGMDNVRNLVGNPIAGLDPHEMIDTRPLCKSINDMITNSGKGNPAMTNLPRKFNIAVSGSRDDFAHTTINDIGLCPCPNKETGEMGFNVIVGGYFSIKRVMESIPMDLWVKPEDATDFCEVMLEVFRDNGDRGDRQKARLIWLIEKWGLDKFRDTVKE---AFDAKFPSKAGALISSQPEPWKGTTWAKRDLLGVHEQKQDGLSFVGVNVPVGRILPDEAN 398          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: A0A7S1TF51_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TF51_9RHOD)

HSP 1 Score: 248 bits (634), Expect = 6.070e-76
Identity = 119/212 (56.13%), Postives = 156/212 (73.58%), Query Frame = 1
Query:   46 SGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVEYVKGVDSAFEPQPAAPAPEEAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAED 681
            +GMDNVRN+VGSPIAG+DP+E+ DTR+LC  I+DMIT+NR GNP  +NLPRK NI VSG RDD+AHT IND+G  P  H ETGEIGFNVVVGG FS++R   S+PL++WI  S+ V FC+ +L  FRD G+R +RQ AR M+++++ G++  RE V++ +     + E QP +   EE F RRD +GVHPQKQEG  W+ V  P GR++A D
Sbjct:  185 TGMDNVRNLVGSPIAGIDPEELFDTRELCANISDMITNNRAGNPQFSNLPRKFNICVSGSRDDFAHTHINDLGFIPVPHRETGEIGFNVVVGGLFSIKRNEMSVPLNLWIHPSNVVEFCRAVLTVFRDHGARVSRQSARFMYLVDQWGVDTLRERVLQAMAVPVDSIEAQPES---EEVFHRRDVLGVHPQKQEGLFWLGVNVPVGRMSAHD 393          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: A0A6S9KFP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KFP9_HETAK)

HSP 1 Score: 248 bits (632), Expect = 1.410e-75
Identity = 124/214 (57.94%), Postives = 156/214 (72.90%), Query Frame = 1
Query:   46 SGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSR-KNRQKARLMFMIEEIGMEKFRETVVEYVKGVDSAFEPQPAAPAPEEAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAEDV 684
            SGMDNVRNMVGSPIAG+DP EM+DTRQLC ++  MIT++ KG P  TNLPRK+N A+SG RDDYAHT IND+G QP A+ E G++GFNVVVGG+FS++ A ESIPL+MW+     V   +  +  FRD G R K+RQK R+M +IE++G+E FR  VV  +  +D A E   A P PE+ + +RD +G+H QKQEG SWV V  PAGRL  EDV
Sbjct:  193 SGMDNVRNMVGSPIAGIDPHEMIDTRQLCIDMQKMITNDNKGRPEYTNLPRKMNFAISGSRDDYAHTSINDVGFQPIANAE-GKMGFNVVVGGYFSIKAAVESIPLNMWVPPEAVVPLSEAFIRYFRDNGQRVKDRQKTRMMILIEQMGVEAFRAGVVAELAKLDPAVETFEAVPEPEDVWEKRDLMGIHAQKQEGLSWVGVVVPAGRLFPEDV 405          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: A0A1X6P1I5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1I5_PORUM)

HSP 1 Score: 246 bits (629), Expect = 6.150e-75
Identity = 127/215 (59.07%), Postives = 155/215 (72.09%), Query Frame = 1
Query:   46 SGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVEYVKGVDSAFEPQPAA-PAPE--EAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAED 681
            +GMD+VRNMVGSPIAG+DP EM+DTR+LC E+NDMIT+ RKGNP  TNLPRK NI VSG RDD+AHT INDIGL P  + + G +GFNVVVGG FS++R AE++P+D W+  +    FCK +L  FRD G RK RQK RLM+MI++ G +  R+ VVE++ G   A    PA  P PE    + RRD  GVH QKQEG SWV    PAGRLTA+D
Sbjct:  213 AGMDSVRNMVGSPIAGIDPHEMIDTRELCTELNDMITNFRKGNPEFTNLPRKFNICVSGSRDDFAHTHINDIGLVPMVNAD-GVVGFNVVVGGMFSIKRDAEAVPMDAWLTPAQVTPFCKALLEVFRDQGDRKIRQKTRLMYMIDQWGADGLRDRVVEHMGGTPFA----PAVIPGPEYDTPWPRRDIQGVHAQKQEGLSWVGCNVPAGRLTADD 422          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: Q7XYQ0_BIGNA (Ferredoxin nitrite reductase n=1 Tax=Bigelowiella natans TaxID=227086 RepID=Q7XYQ0_BIGNA)

HSP 1 Score: 245 bits (625), Expect = 6.590e-74
Identity = 123/228 (53.95%), Postives = 163/228 (71.49%), Query Frame = 1
Query:   37 NNHSGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVEYVK--------GVDSAFEPQPAAPA-----PEEAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAED 681
            N  SGMDNVRN+VGSPIAG+DP+E+VDTR +  +I+ MIT++ KGNP L NLPRK NIAVSG RDD+AHT INDIGL+P  + E+GE+GFNV+VGG+FS++R  ESIP+D+WIK  D   FC+ +LL FRD GSR +RQKARL+++IE++GME FR+ + +           G     +P+P A A     P +   +RD + VH QKQEG SWV +  PAGR+  ++
Sbjct:  230 NVQSGMDNVRNLVGSPIAGIDPEELVDTRDIAKDIDAMITNDGKGNPKLANLPRKFNIAVSGSRDDFAHTSINDIGLRPCPNKESGEMGFNVIVGGYFSIKRVMESIPMDIWIKAEDAARFCEAVLLYFRDNGSRGDRQKARLIWLIEDMGMEGFRQAISDKYDEMFPKKKGGAAIPAQPEPWAVAAGTNTPTQPHKKRDILRVHSQKQEGLSWVGINVPAGRILPDE 457          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: A0A1E7FE99_9STRA (Ferredoxin-nitrite reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE99_9STRA)

HSP 1 Score: 240 bits (613), Expect = 5.550e-73
Identity = 123/226 (54.42%), Postives = 157/226 (69.47%), Query Frame = 1
Query:   22 AHNNDNNHSGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMIT----DNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIK--QSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVEYVKGVDSAFEPQPAAPAPEEAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAED 681
            A N  +  S +D+VRNMVGSP+AG+D  E+VDTR LCN +ND+I+       +GNP   NLPRK NIA+SG RDD+AHT INDIGLQP  H ETGE+GFNVV+GGF S++R AES+   MWIK  +   VTFC+ +L  FRD   RK+RQKARLM+++E+ G+E F++ V+  VK  D   E     P P E F RR+ +GVHPQKQ GK  V +  PAGRL+A +
Sbjct:  144 ARNQTSFQSALDSVRNMVGSPLAGIDDHELVDTRVLCNAVNDLISMDPETETRGNPQWANLPRKFNIAISGSRDDFAHTHINDIGLQPCVHAETGEMGFNVVLGGFMSIKRVAESVDSGMWIKADRESVVTFCEAILRIFRDESERKDRQKARLMWLVEKYGVEDFKKAVIAEVKSYDRGVEIFDEQPRPTEKFERRELLGVHPQKQVGKVRVGIMVPAGRLSATE 369          
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Match: A0A8J5XYI8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XYI8_DIALT)

HSP 1 Score: 240 bits (613), Expect = 1.700e-72
Identity = 123/216 (56.94%), Postives = 156/216 (72.22%), Query Frame = 1
Query:   46 SGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPET-GEIGFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNRQKARLMFMIEEIGMEKFRETVVEYV--KGVDSAFEPQPAAPAPEEAFSRRDYVGVHPQKQEGKSWVCVTTPAGRLTAEDV 684
            SG+DNVRN+VGSPIAGLDP E+VDTR +C +IN  IT   +GNP   NLPRK NIAVSG RDD++HT INDIGLQ   HP+   E GFN+V+GG+FS++R AESIP+  W+   D   F   +L  FRD G R++RQK RLM+++EE G++ FR  V E +  +GVD+    + AAP P +AFSRRD +GVH Q+QEGKSWV VT P GRL+  +V
Sbjct:  210 SGLDNVRNLVGSPIAGLDPHELVDTRPVCAQINSDITGAFRGNPEWANLPRKFNIAVSGSRDDFSHTTINDIGLQAAVHPDCPSEPGFNIVLGGYFSIKRVAESIPMGAWVSARDAPAFSLAVLEVFRDYGRREDRQKTRLMWLLEERGLDWFRAMVNEILARRGVDAL---RAAAPPPADAFSRRDLLGVHTQRQEGKSWVGVTVPVGRLSVGEV 422          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15471.3828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ4_ECTSI1.510e-13894.81Ferredoxin nitrite reductase n=2 Tax=Ectocarpus Ta... [more]
R7QAL9_CHOCR7.930e-8461.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J4B2_9FLOR2.690e-8361.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0D8G4_9EUKA1.510e-7656.70Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S1TF51_9RHOD6.070e-7656.13Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A6S9KFP9_HETAK1.410e-7557.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1X6P1I5_PORUM6.150e-7559.07Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
Q7XYQ0_BIGNA6.590e-7453.95Ferredoxin nitrite reductase n=1 Tax=Bigelowiella ... [more]
A0A1E7FE99_9STRA5.550e-7354.42Ferredoxin-nitrite reductase n=1 Tax=Fragilariopsi... [more]
A0A8J5XYI8_DIALT1.700e-7256.94Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15471contigE-fasciculatus_F_contig15471:236..2284 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score414.5
Seed ortholog evalue3.3e-113
Seed eggNOG ortholog2880.D7FVZ4
Preferred nameNIR
KEGG rclassRC00176
KEGG koko:K00366
KEGG ReactionR00790
KEGG Pathwayko00910,ko01120,map00910,map01120
KEGG ModuleM00531
GOsGO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0010035,GO:0010167,GO:0016020,GO:0016491,GO:0016661,GO:0016662,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048046,GO:0050421,GO:0050896,GO:0055114,GO:0098809,GO:1901698,GO:1901700
EggNOG free text desc.sulfite reductase (ferredoxin) activity
EggNOG OGsCOG0155@1,KOG0560@2759
EC1.7.7.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size690
Cds size690
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15471.3828.1prot_E-fasciculatus_F_contig15471.3828.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15471 236..2284 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928024.5628686-CDS-E-fasciculatus_F_contig15471:235..5321622928024.5628686-CDS-E-fasciculatus_F_contig15471:235..532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15471 236..532 +
1695995792.9073117-CDS-E-fasciculatus_F_contig15471:235..5321695995792.9073117-CDS-E-fasciculatus_F_contig15471:235..532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15471 236..532 +
1622928024.5734413-CDS-E-fasciculatus_F_contig15471:1181..12941622928024.5734413-CDS-E-fasciculatus_F_contig15471:1181..1294Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15471 1182..1294 +
1695995792.9271796-CDS-E-fasciculatus_F_contig15471:1181..12941695995792.9271796-CDS-E-fasciculatus_F_contig15471:1181..1294Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15471 1182..1294 +
1622928024.5835583-CDS-E-fasciculatus_F_contig15471:2004..22841622928024.5835583-CDS-E-fasciculatus_F_contig15471:2004..2284Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15471 2005..2284 +
1695995792.9382825-CDS-E-fasciculatus_F_contig15471:2004..22841695995792.9382825-CDS-E-fasciculatus_F_contig15471:2004..2284Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15471 2005..2284 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15471.3828.1

>prot_E-fasciculatus_F_contig15471.3828.1 ID=prot_E-fasciculatus_F_contig15471.3828.1|Name=mRNA_E-fasciculatus_F_contig15471.3828.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=230bp
MNRISSCAHNNDNNHSGMDNVRNMVGSPIAGLDPQEMVDTRQLCNEINDM
ITDNRKGNPALTNLPRKINIAVSGGRDDYAHTMINDIGLQPHAHPETGEI
GFNVVVGGFFSVRRAAESIPLDMWIKQSDTVTFCKGMLLAFRDLGSRKNR
QKARLMFMIEEIGMEKFRETVVEYVKGVDSAFEPQPAAPAPEEAFSRRDY
VGVHPQKQEGKSWVCVTTPAGRLTAEDVS*
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mRNA from alignment at E-fasciculatus_F_contig15471:236..2284+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15471.3828.1 ID=mRNA_E-fasciculatus_F_contig15471.3828.1|Name=mRNA_E-fasciculatus_F_contig15471.3828.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2049bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15471:236..2284+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAACCGCATATCGTCGTGTGCACACAACAACGACAACAACCACAGCGG GATGGACAACGTGCGCAACATGGTGGGCAGCCCCATCGCCGGCCTGGACC CGCAGGAGATGGTCGACACGCGGCAGCTCTGCAACGAGATCAACGACATG ATCACCGACAACCGCAAGGGTAACCCCGCCCTCACCAACCTCCCGCGCAA GATCAACATCGCCGTCTCCGGCGGCCGGGATGACTACGCGCACACCATGA TCAATGACATCGGACTGCAGCCCCACGCACACCCTGAAACCGGAGAGGTG GGAATACTATACTTCCACGTCTACATACCAGTACAGCAGTACAGCAGTAC AGCAGAAGGGCGCGGCGTCAAAGACGCCTACGCGCGTAGCTGGCTGAACA TGTACTGTACCTGAAGCCTTCCAGCACAGTTGTTGATACTTTTTCTCGTT TTGTTCATGTATCTATCTTGTGTGACGCTTGGGGCGAGCGAGATTCAAAA GTTGGAACCGCGCGGCGAGATACGGAGCGGGGGTCTGCAATGAGGGAAGT TTACCTGAATTTTTTTGGGGGTGGCGGATGGCAACTAGGCAAGGAAGATA AAAGGGAAGACAGAGACGATGAGCGGGTCGGAGGGGGGCGTTGGGTCTAC GCCGGCACACTTGTTTGTTGTCTTGAGAACCTCGTGGTGGCCCAGGAGTG TTTCAATGTGTAAATACACGCGAAAAACGCGCTGCGTGCTTGCAACGAAG GTAGCATTCGCCATTGATAGCGCGTGTTGTGTTCTGTTAGCGCGTGCATG TATGCCTCGATTGTGAAATGGAAGCCTGCATGCATGCGTACCCTACCCCC TTTCCGACCCTTCTCCGTGTGCCTGACCCTATCCCCCCTCCCCTCCCCCC TGCATCGCTGCCTGTGACCATGGTGGCGTGGGTATTGTAATAATAGATCG GGTTCAACGTGGTGGTAGGCGGCTTCTTCTCAGTGAGACGAGCGGCGGAG AGCATCCCCCTCGACATGTGGATCAAGCAGAGCGACACCGTCACGTTCTG CAAGGGCATGTGAGTTTTTTTGTTTGTTGCCTCGGGAGTCAAGGTCTGCT GCTGCTGGCTAGCGTGCCTTGATGCTCCGAAGGGTCTGGTGTTTCCATTG CCATAACTAGCGCCTTTCGGTGCTTGCACTTTTGAAAATATTTCGATTTT GCCAGAGGGTGGCTTGCACAAGTCAGCTACGCAAAGGCCTCTAGAACAGA TGCGATGACAGAAAAGACTGCGCGCCTGCCCGAGGAAAAGGGGATTTGTT TAAAAGTCTATCAGGTTGTTATGTTGTTGTACTGTATGACGAATACGGCA AAGACCGAGCACAGAAACCTTGGTCAGAGGTTGTTTACCCCACCATGTGG TTGATGCCGCATCGTTGAGTGTGTTTTTTTTGTGTCTGCAATGCCTCTTT CTGCAGCTAGAAAGGAGCTGGAGTACAAAGCCGTTACCCCAAGCAAGGCT ATGGCGAGCAACATGCTATGCCGAAAGATTCCCTCCCTCCCCTCCCAGTC ACACCTTCCAATGTCCACCGGAGACACAATGGTTGCTCTGCCACTGCACC CAACGCTCTTTTCTGTTTTAGGCGAGATCGAAACAAGAACCGACCCCACT CCATCGCTCCCCAGCTTCATTGTTAAGGCCTACCGTTTATCGGCGCCCGG ATAATCCATCCGTCACACTTCCTCCCCTTGTCCAAAATCCAATCCGTGAA CCCCCCCCCCCAACCCCAGGCTCCTGGCCTTCCGAGACCTGGGATCGCGC AAGAATCGCCAGAAGGCTCGTCTGATGTTCATGATCGAGGAGATAGGGAT GGAGAAGTTCCGCGAGACCGTCGTCGAGTACGTCAAGGGCGTCGACTCGG CGTTCGAGCCGCAGCCCGCGGCTCCCGCGCCGGAGGAGGCTTTCTCCAGG AGGGACTACGTCGGCGTGCACCCCCAGAAGCAGGAGGGGAAGTCGTGGGT GTGCGTGACTACGCCGGCGGGTCGCTTGACGGCGGAGGATGTGAGTTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15471:236..2284+

>mRNA_E-fasciculatus_F_contig15471.3828.1 ID=mRNA_E-fasciculatus_F_contig15471.3828.1|Name=mRNA_E-fasciculatus_F_contig15471.3828.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1380bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15471:236..2284+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAACCGCATATCGTCGTGTGCACACAACAACGACAACAACCACAGCGG
GATGGACAACGTGCGCAACATGGTGGGCAGCCCCATCGCCGGCCTGGACC
CGCAGGAGATGGTCGACACGCGGCAGCTCTGCAACGAGATCAACGACATG
ATCACCGACAACCGCAAGGGTAACCCCGCCCTCACCAACCTCCCGCGCAA
GATCAACATCGCCGTCTCCGGCGGCCGGGATGACTACGCGCACACCATGA
TCAATGACATCGGACTGCAGCCCCACGCACACCCTGAAACCGGAGAGATG
AACCGCATATCGTCGTGTGCACACAACAACGACAACAACCACAGCGGGAT
GGACAACGTGCGCAACATGGTGGGCAGCCCCATCGCCGGCCTGGACCCGC
AGGAGATGGTCGACACGCGGCAGCTCTGCAACGAGATCAACGACATGATC
ACCGACAACCGCAAGGGTAACCCCGCCCTCACCAACCTCCCGCGCAAGAT
CAACATCGCCGTCTCCGGCGGCCGGGATGACTACGCGCACACCATGATCA
ATGACATCGGACTGCAGCCCCACGCACACCCTGAAACCGGAGAGATCGGG
TTCAACGTGGTGGTAGGCGGCTTCTTCTCAGTGAGACGAGCGGCGGAGAG
CATCCCCCTCGACATGTGGATCAAGCAGAGCGACACCGTCACGTTCTGCA
AGGGCATATCGGGTTCAACGTGGTGGTAGGCGGCTTCTTCTCAGTGAGAC
GAGCGGCGGAGAGCATCCCCCTCGACATGTGGATCAAGCAGAGCGACACC
GTCACGTTCTGCAAGGGCATGCTCCTGGCCTTCCGAGACCTGGGATCGCG
CAAGAATCGCCAGAAGGCTCGTCTGATGTTCATGATCGAGGAGATAGGGA
TGGAGAAGTTCCGCGAGACCGTCGTCGAGTACGTCAAGGGCGTCGACTCG
GCGTTCGAGCCGCAGCCCGCGGCTCCCGCGCCGGAGGAGGCTTTCTCCAG
GAGGGACTACGTCGGCGTGCACCCCCAGAAGCAGGAGGGGAAGTCGTGGG
TGTGCGTGACTACGCCGGCGGGTCGCTTGACGGCGGAGGATGTGAGTTGA
GCTCCTGGCCTTCCGAGACCTGGGATCGCGCAAGAATCGCCAGAAGGCTC
GTCTGATGTTCATGATCGAGGAGATAGGGATGGAGAAGTTCCGCGAGACC
GTCGTCGAGTACGTCAAGGGCGTCGACTCGGCGTTCGAGCCGCAGCCCGC
GGCTCCCGCGCCGGAGGAGGCTTTCTCCAGGAGGGACTACGTCGGCGTGC
ACCCCCAGAAGCAGGAGGGGAAGTCGTGGGTGTGCGTGACTACGCCGGCG
GGTCGCTTGACGGCGGAGGATGTGAGTTGA
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