mRNA_E-fasciculatus_F_contig1547.3827.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1547.3827.1
Unique NamemRNA_E-fasciculatus_F_contig1547.3827.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: A0A0L0FN09_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FN09_9EUKA)

HSP 1 Score: 345 bits (886), Expect = 2.160e-114
Identity = 161/343 (46.94%), Postives = 211/343 (61.52%), Query Frame = 1
Query:    1 CRS-GICNTLTGKCACYGLWTGPTCERAIGDYSVPAAADNWYQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDIDYSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCKSTFDSTQCSAASVSGSVSYPIDWTVGTGAAMDEDWCPMTLNTATDECPSDRFFVCDP 1026
            C+S G CN +TG+C C   W GP C R IGD S+P     WY+P  G TW+WQ+ G     E    ++V+LYDID+  S  VI +L   G+  MCY SAG+ E +R+D +++P  VKGGI+SF  GDTF +E WLDLRR+D++ P+MLERLD+ Q KGCDA+E+DNAD   H   L  GG I +  Q+  N W+ AQ + RGMGVA+KN+   A F  D YDMVVNEEC++ GNC+NYWP++   KP+LN EY T  C YC +A  M+ STIKK P L +C  DC   +  + C A   + +           G    + WCPM  N   DE P+ R+  CDP
Sbjct:   30 CKSHGKCNVITGECMCRDRWIGPDCGRKIGDLSIPKQKGGWYKPDKGITWQWQLQG-----EIDRTYDVDLYDIDFDTSPQVIKELHKDGRKVMCYFSAGSWEMWRKDADMYPASVKGGILSFASGDTFSNEAWLDLRRMDVIGPLMLERLDVAQQKGCDAIEFDNADTVTHTAKL--GGDIELRTQLRVNKWLVAQAHVRGMGVALKNSEMFATFLSDTYDMVVNEECFVMGNCDNYWPFLNREKPVLNCEYTTALCFYCKRAKAMEFSTIKKTPALDACMVDCSHDYSESVCKATGYTDATGKQWKHAKYDGKKNKDGWCPMAQNKQKDESPAKRYGTCDP 365          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: A0A0L0FCU9_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCU9_9EUKA)

HSP 1 Score: 340 bits (872), Expect = 1.260e-111
Identity = 157/346 (45.38%), Postives = 218/346 (63.01%), Query Frame = 1
Query:    7 SGICNTLTGKCACYGLWTGPTCERAIGDYSVPAAADNWYQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDIDYSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCKSTFDSTQCSAASVSGSVSYPIDWTVGTGAA----MDEDWCPMTLNTATDECPSDRFFVCDPTV 1032
            +G C+  +G+C+C   W G  CER IGD+ +P     WY+P  G TW+WQ+      DE     +V+LYD+D   S+ VI+ L   G+  MCY SAG+ E+FR D     + ++GG + FGEGD F DE WLDLRR+D+   +MLER+D+ + KGCDA+E+DN D+ +HD  +  G +  + +Q+ +N W+A Q +ARGM VA+KN+NE   F  D +DMVVNEECWINGNC++YWP+I   KP+LN EYFT+ CMYC +A  M+ STIKK P L +C A C   +D+++C        V++P D +    AA    +   WCPMT N    EC + RF  CDP +
Sbjct:   81 NGACDPFSGRCSCNSRWIGSYCERIIGDFRIPEHNKTWYKPKAGITWQWQL-----QDEIDQSFDVDLYDVDVDTSATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGGPLDFGEGDVFTDEAWLDLRRMDMFLEVMLERIDLARDKGCDAIEYDNLDMIIHDHNIP-GAEFDLKIQLQFNIWLAEQAHARGMAVALKNSNEFNMFLADTFDMVVNEECWINGNCDHYWPFINRDKPVLNCEYFTSLCMYCDRAAKMNFSTIKKNPPLDACLATCSQEYDTSRCEG------VNFP-DASGSYAAAKYPNLANGWCPMTTNVDAVECENPRFKTCDPAI 413          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: A0A0L0FMI3_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FMI3_9EUKA)

HSP 1 Score: 327 bits (838), Expect = 1.870e-104
Identity = 164/350 (46.86%), Postives = 217/350 (62.00%), Query Frame = 1
Query:   10 GICNTLTGKCACYGLWTGPTCERAIGDYSVPAAAD--NWYQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDIDYSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCK--------STFDSTQCSAASVSGSVSYPIDWTVGTGAAMDEDWCPMTLNTATDECPSDRFFVCDPT 1029
            G C+ +TGKC C   +TG +C R IGD S+P  ++  + Y+P  G  W+WQ+      D     H+V LYDID+    + IA L + G+  MCY SAG++E +R D  LFP  ++GG + FG GD F+DE WLDLRR D++ PIM+ RLD  +AKGCDAVE+DN D+ +H+ GL+  G I +++Q+ ++ W   Q +ARGM VA+KN+NE A    D YDMVVNEE +INGN +NYWP++   KP+LNTEYFT+RC YC  +  M +STIKK PDL SC  DC         S  DS    A   SG   YP         A  E WCP+TLN   +EC + RF  CDP+
Sbjct:  240 GTCDPITGKCICDNRFTGTSCSRVIGDISIPTNSETVDRYKPKKGIRWQWQL-----QDTIDESHDVPLYDIDFDTPDSTIASLHAAGRRVMCYFSAGSTEKWRIDQELFPAFIQGGPLLFGTGDVFDDEAWLDLRRFDIIGPIMMNRLDAAKAKGCDAVEFDNPDIVIHEHGLA--GNIDLTLQLQFDKWCVRQAHARGMSVALKNSNEFAFLLSDTYDMVVNEEAFINGNIDNYWPFLHRDKPVLNTEYFTSRCFYCATSRAMGVSTIKKRPDLDSCLVDCTMEMPLNVTSVCDSIGFEA---SGRARYP---------ASAEGWCPLTLNLDANECAAPRFAECDPS 570          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: A0A0L0FQ33_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQ33_9EUKA)

HSP 1 Score: 324 bits (831), Expect = 2.350e-101
Identity = 164/344 (47.67%), Postives = 218/344 (63.37%), Query Frame = 1
Query:   10 GICNTLTGKCACYGLWTGPTCERAIGDYSVPAAADNW--YQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDIDYSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCKSTFDSTQCSAASVSGSVSYPIDWTVGTGA--AMDEDWCPMTLNTATDECPSDRFFVCDPT 1029
            G C+ + GKC C   +TG  C R +GD S+PA  +N   ++P  G  W+WQ+      D     H+V LYD+D    ++ IA L + G+  MCY SAG+ ED+R D  LFPE +KGG + FGEGD F DE WLD+RR+D++APIM++RLD  +AKGCDA+E+DN D+ +H+ GL   G I +++Q+ ++ W   Q +ARGM VA+KN+NE A    D YDMVVNEE +INGN +NYWP++   KP+LNTEYFT+RC YC  A  M +STIKK PDL SC  DC  T D    S  SV   + +    T G     A  + WCPMT NT   EC + RF  C+P+
Sbjct:  427 GSCDPINGKCTCDSRYTGTECGRIMGDISIPANLENVERFRPQKGIRWQWQL-----QDTIDESHDVPLYDVDIDTPASTIASLHAAGRKVMCYFSAGSYEDWRMDRALFPEFIKGGPLMFGEGDVFTDEAWLDIRRIDIIAPIMMDRLDAAKAKGCDALEFDNPDVIIHEHGLE--GNIDLTLQLQFDIWGVRQAHARGMSVALKNSNEFAFLLSDTYDMVVNEEAFINGNIDNYWPFLHRNKPVLNTEYFTSRCFYCATAKAMGVSTIKKRPDLDSCMVDC--TMD-IPLSVTSVCDDIGFH---TAGKAKFPANADGWCPMTENTDIAECANTRFGECEPS 757          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: A0A0L0FQP7_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQP7_9EUKA)

HSP 1 Score: 265 bits (678), Expect = 1.310e-84
Identity = 114/239 (47.70%), Postives = 161/239 (67.36%), Query Frame = 1
Query:    7 SGICNTLTGKCACYGLWTGPTCERAIGDYSVPAAADNWYQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDIDYSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWI 723
            +G C+  +G+C+C   WTG  CER IGD+ +P     WY+P  G TW+WQ+      DE     +V+LYD+D   S+ VI+ L   G+  MCY SAG+ E+FR D     + ++GG + FGEGD F DE WLDLRR+D++  +MLER+D+ + KGCDA+E+DN D+ +HD  +  G +  + +Q+ +N W+A Q +ARGM VA+KN+NE + F  D +DMVVNEECWI GNC+NYWP+I
Sbjct:   18 NGACDPFSGRCSCNSRWTGLYCERIIGDFRIPEHNKTWYKPKAGITWQWQL-----QDEIDQSFDVDLYDVDVDTSATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGGPLDFGEGDVFTDEAWLDLRRMDMILEVMLERIDLARDKGCDAIEYDNLDMYIHDHNIP-GAEFDLKIQLQFNIWLAEQAHARGMAVALKNSNEFSMFLADTFDMVVNEECWIFGNCDNYWPFI 250          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: UPI001969C6AE (endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfogranum japonicum TaxID=231447 RepID=UPI001969C6AE)

HSP 1 Score: 183 bits (464), Expect = 3.180e-52
Identity = 94/268 (35.07%), Postives = 156/268 (58.21%), Query Frame = 1
Query:   70 CERAIGDYSVPAA-----ADNWYQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDID-YSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCK 855
            C  ++ D  VP         +W+QP  G +W+WQ+ G    D      +V++YD+D +  S+++I+ L+S+GK  +CY+SAG+ E++R+D N+FPEEV G  +     D + DE+WLD+ R+D++ PIML R+D+   KGCD +E DN D   +D G +    ++   Q+ YN W+A   +AR + + +KN+ +     V  +D  +NE+C+    C+   P+++AGK +   EY  +   +C+QAN M+   +KK   L S R  C+
Sbjct:   16 CTVSMADVLVPYLPAYIHGSSWWQPKPGVSWQWQLSGTLDTDL-----DVDMYDVDLFDTSASMISLLKSQGKKVICYMSAGSWENYRDDANVFPEEVLGKYL-----DGWPDERWLDISRIDILGPIMLRRMDLAVEKGCDGIEPDNIDGYSNDSGFA----LTSEEQLTYNRWLAEAAHARNLSIGLKNDLDQVQDLVSYFDWALNEQCFQYDECDLLLPFVQAGKAVFGVEYSLSTTTFCSQANSMNFDWLKKNLSLDSWRVSCR 269          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: A0A2E1AIM4_9CHLR (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E1AIM4_9CHLR)

HSP 1 Score: 176 bits (446), Expect = 1.760e-49
Identity = 94/249 (37.75%), Postives = 140/249 (56.22%), Query Frame = 1
Query:   97 VPAAADNWYQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDID-YSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFT---TRCMYCTQANLMDMSTIKKVPDL 831
             P    +W+QPS GTTW+WQ++G     E  + ++V++YDID +      I  L   G+  +CY SAGT ED+R D++ FPE + G  +    G     E++L++R+LDL+ PIM  RLD+   KGC+ VE DN D   +D G      ++   Q+AYN W+A   + RG+ + +KN+ +     VDD+D  + EEC+  G C+ + P+I+ GK +   EY      R  YC QAN M  S + K  DL
Sbjct:   27 TPTPEPSWWQPSPGTTWQWQLNG-----EVNTRYDVQMYDIDLFDTPQETIDKLHEDGRVVICYFSAGTYEDWRPDVDDFPEAILGKPLEDWPG-----ERYLNIRQLDLIKPIMEARLDLAVEKGCEGVEPDNVDAYTNDTGFD----LTPEDQLAYNRWLAQAAHERGLSIGLKNDGDQVEQLVDDFDWALVEECFQFGFCDQFLPFIEQGKAVFGVEYIEGGLERADYCPQANAMGYSWLTKTLDL 261          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: A0A3D4Z2E0_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D4Z2E0_9DELT)

HSP 1 Score: 174 bits (440), Expect = 7.510e-49
Identity = 95/253 (37.55%), Postives = 148/253 (58.50%), Query Frame = 1
Query:  103 AAADNWYQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDIDYSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSG--GGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCK 855
            A AD  + P+L T+W+WQ+  +        +++++L+D+D S    VI +L S G+  +CY SAG+ E++R D N FP  VKG        + +  E+WLD+RRLD++ PIM  RLD+  AKGCD VE DN D      G S   G +++   Q+ YN ++AA+ +ARG+ V +KN+ +     V  +D  +NE+C+    C+   P+IKAGK + N EY      +C +AN M+ +++KK  DL + R  C+
Sbjct:   17 ARADGIWTPALNTSWQWQLTDEIDTSVDAQMYDIDLFDVDES----VIDELHSAGRKVICYFSAGSWENWRPDANQFPSSVKG------RNNGWPGEKWLDIRRLDILGPIMKARLDLAVAKGCDGVEPDNVD------GYSNRSGFKLTYQDQLHYNKFLAAEAHARGLSVGLKNDVDQVKDLVAFFDWTLNEQCFEYRECDTLLPFIKAGKAVFNVEYKGNTNNFCPKANAMNFNSMKKHLDLDAWRVPCR 253          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: A0A1F5JF22_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_40_11 TaxID=1797762 RepID=A0A1F5JF22_9BACT)

HSP 1 Score: 174 bits (440), Expect = 1.710e-48
Identity = 93/246 (37.80%), Postives = 144/246 (58.54%), Query Frame = 1
Query:  121 YQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDID-YSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCK 855
            ++P+L T+W+WQ+ G        +  NV +YDID +  S++V+A L++ GK  +CY SAG+ E++R D N FP+ VKG        + +  E+WLD+RRLD++ PIM  RLD+ + KGCD VE DN D   ++ G      ++   QI YN W A   +ARG+ V +KN+ E     +  YD  +NE+C+    C+    +++AGK + N EY      +C QAN M+ +++KK  DL + R  C+
Sbjct:   52 WKPALNTSWQWQLTGT-----LDTSLNVTMYDIDLFDNSASVVASLKNSGKKVICYYSAGSWENWRPDANQFPDSVKGN------SNGWPGEKWLDIRRLDVLGPIMSARLDLAKQKGCDGVEPDNVDGYTNNTGFP----LTYQDQINYNKWTANAAHARGLSVGLKNDIEQVNDLLSYYDWTLNEQCFQYNECDPLTKFVQAGKAVFNVEYKLDTSQFCPQANSMNFNSLKKNLDLDAYRVACR 282          
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Match: UPI001F568B15 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Kineococcus sp. TRM81007 TaxID=2925831 RepID=UPI001F568B15)

HSP 1 Score: 172 bits (436), Expect = 2.090e-48
Identity = 92/246 (37.40%), Postives = 142/246 (57.72%), Query Frame = 1
Query:  118 WYQPSLGTTWEWQIDGKSPHDEFGSLHNVELYDIDYSYSSAVIADLQSKGKTAMCYISAGTSEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERLDIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYARGMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNTEYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCK 855
            W++P  GT W+WQ+ G     +     +V +YD+D+     V+  L + G+  +CY+SAGT E++R+D + FP EV G  +    GD + DE+WLD+RR+D++ P++L+RLD  +    DAVE DN D   +D G      ++   Q+ +N W+AA  + RGMGVA+KN+    A  V D+D  VNE C     C+   P++ AGK +L+ EY  T   +C  A+    S++ K  DLT+ R  C+
Sbjct:    8 WWRPEPGTPWQWQLSG-----DLDLTVDVPVYDVDHQVPQEVVDRLHADGRRVICYLSAGTVEEYRDDAHRFPAEVVGKAL----GD-WPDERWLDVRRIDVIGPVLLDRLDACRDADFDAVEPDNVDAWANDSGFD----LTAEDQLRFNRWLAAAAHERGMGVALKNDLGQVADLVGDFDFAVNESCARYDECDLLQPFVDAGKAVLHVEYGLTPAGFCEVAHRPGFSSVLKDRDLTAYRHVCE 239          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1547.3827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0FN09_9EUKA2.160e-11446.94EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FCU9_9EUKA1.260e-11145.38EGF-like domain-containing protein (Fragment) n=1 ... [more]
A0A0L0FMI3_9EUKA1.870e-10446.86EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FQ33_9EUKA2.350e-10147.67EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FQP7_9EUKA1.310e-8447.70EGF-like domain-containing protein (Fragment) n=1 ... [more]
UPI001969C6AE3.180e-5235.07endo alpha-1,4 polygalactosaminidase n=1 Tax=Desul... [more]
A0A2E1AIM4_9CHLR1.760e-4937.75Endo alpha-1,4 polygalactosaminidase n=1 Tax=Anaer... [more]
A0A3D4Z2E0_9DELT7.510e-4937.55Endo alpha-1,4 polygalactosaminidase n=1 Tax=Delta... [more]
A0A1F5JF22_9BACT1.710e-4837.80Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candi... [more]
UPI001F568B152.090e-4837.40endo alpha-1,4 polygalactosaminidase n=1 Tax=Kineo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1547contigE-fasciculatus_F_contig1547:4344..7119 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score346.7
Seed ortholog evalue1.3e-92
Seed eggNOG ortholog72019.SARC_10117T0
EggNOG free text desc.Glycoside-hydrolase family GH114
EggNOG OGs2RCTR@2759,39XS2@33154,COG3868@1
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1059
Cds size1059
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1547.3827.1prot_E-fasciculatus_F_contig1547.3827.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1547 4344..7119 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928024.4700534-CDS-E-fasciculatus_F_contig1547:4343..45291622928024.4700534-CDS-E-fasciculatus_F_contig1547:4343..4529Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 4344..4529 +
1695995792.8384323-CDS-E-fasciculatus_F_contig1547:4343..45291695995792.8384323-CDS-E-fasciculatus_F_contig1547:4343..4529Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 4344..4529 +
1622928024.48415-CDS-E-fasciculatus_F_contig1547:4956..51511622928024.48415-CDS-E-fasciculatus_F_contig1547:4956..5151Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 4957..5151 +
1695995792.856086-CDS-E-fasciculatus_F_contig1547:4956..51511695995792.856086-CDS-E-fasciculatus_F_contig1547:4956..5151Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 4957..5151 +
1622928024.4941063-CDS-E-fasciculatus_F_contig1547:5592..57271622928024.4941063-CDS-E-fasciculatus_F_contig1547:5592..5727Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 5593..5727 +
1695995792.866286-CDS-E-fasciculatus_F_contig1547:5592..57271695995792.866286-CDS-E-fasciculatus_F_contig1547:5592..5727Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 5593..5727 +
1622928024.5053911-CDS-E-fasciculatus_F_contig1547:5982..61771622928024.5053911-CDS-E-fasciculatus_F_contig1547:5982..6177Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 5983..6177 +
1695995792.8757274-CDS-E-fasciculatus_F_contig1547:5982..61771695995792.8757274-CDS-E-fasciculatus_F_contig1547:5982..6177Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 5983..6177 +
1622928024.5209162-CDS-E-fasciculatus_F_contig1547:6461..65931622928024.5209162-CDS-E-fasciculatus_F_contig1547:6461..6593Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 6462..6593 +
1695995792.885607-CDS-E-fasciculatus_F_contig1547:6461..65931695995792.885607-CDS-E-fasciculatus_F_contig1547:6461..6593Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 6462..6593 +
1622928024.5327306-CDS-E-fasciculatus_F_contig1547:6903..71191622928024.5327306-CDS-E-fasciculatus_F_contig1547:6903..7119Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 6904..7119 +
1695995792.8962395-CDS-E-fasciculatus_F_contig1547:6903..71191695995792.8962395-CDS-E-fasciculatus_F_contig1547:6903..7119Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1547 6904..7119 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1547.3827.1

>prot_E-fasciculatus_F_contig1547.3827.1 ID=prot_E-fasciculatus_F_contig1547.3827.1|Name=mRNA_E-fasciculatus_F_contig1547.3827.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=353bp
CRSGICNTLTGKCACYGLWTGPTCERAIGDYSVPAAADNWYQPSLGTTWE
WQIDGKSPHDEFGSLHNVELYDIDYSYSSAVIADLQSKGKTAMCYISAGT
SEDFREDINLFPEEVKGGIVSFGEGDTFEDEQWLDLRRLDLVAPIMLERL
DIMQAKGCDAVEWDNADLPVHDLGLSGGGQISVSVQIAYNAWIAAQTYAR
GMGVAMKNNNEAAAFHVDDYDMVVNEECWINGNCNNYWPWIKAGKPILNT
EYFTTRCMYCTQANLMDMSTIKKVPDLTSCRADCKSTFDSTQCSAASVSG
SVSYPIDWTVGTGAAMDEDWCPMTLNTATDECPSDRFFVCDPTVSSSSLH
YA*
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mRNA from alignment at E-fasciculatus_F_contig1547:4344..7119+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1547.3827.1 ID=mRNA_E-fasciculatus_F_contig1547.3827.1|Name=mRNA_E-fasciculatus_F_contig1547.3827.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2776bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1547:4344..7119+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGCCGCAGTGGAATCTGCAACACCCTGACGGGAAAGTGCGCGTGCTACGG CCTGTGGACTGGCCCTACCTGCGAGCGTGCGATCGGCGACTACTCGGTGC CCGCCGCAGCTGACAACTGGTACCAACCGTCGCTGGGAACCACATGGGAG TGGCAGATCGACGGTAAGAGTCCGCACGACGAGTTCGTATGGCTTGCGGC ATGTATTTGCCCCTCTGTTGTCGCTTATTTTTCCACACCCGATCGAGCCC TACGTGTGCACTCAACCTCATGTACCCCCTCGTGTTAAGGGACACTACAC GCACAAATTCCGTGTTGGGGTCAACCATGCTTCATGGGTTCGAGGTGACG ACCAGACCTGGTGTGCTTGACAAAGTTTGTCGACATCTTGATGCCCCCTC CCCGAACCTTTTCGGGGTGCCGGCGGGATGTCCCTGCCCGTCGTTTTCTC TGCCAACGGCGACTTGCAATATTTTCATCCAACTGCCACATAAATACCTG CTCGCCCGCCCGCGCCGCGCCTGCGGTGCTTGATGGCGTTCGATCGGATC TCGGAACTCGGCCGTTCGTGTCGTAAACCCGCAGGGCTACCCATCCCGGG CGGTAACGGGGAGGGATCTCTGCACAACGTTGAGCTCTACGATATCGACT ACTCGTACTCTTCGGCGGTCATCGCCGACCTCCAGAGCAAGGGTAAGACT GCCATGTGCTACATCTCCGCCGGCACCTCGGAGGACTTCCGCGAGGACAT CAACCTCTTCCCTGAAGAGGTCAAGGGCGGCATCGTTTCGTTCGGGGAAG GCGACACGGTGCGTCCCATGGAACAATCCATATTGATTGTCTACTGCTGT GGTAGGCGTTGTGGTCGTTTGTTTCCTTCTTCGATGGAAAGCAGAAAACA CGTCCTTCTCACACTACTATTGGATACCGGTTCACCGAGCGCGCCAGGCT GCACGATCGCTGCGCCCGCGAGCCTGCCGTGCAGTTAAGAACTATTGTTT TCGACGTTTAGGGTAGAGAAATGACAAGTTTTTCACAGGTGTTCTTGGTA TGTTCCACGCCTACAACCTATGCCAATTTCGGAGAATCCCCTACGCACCT CCACACGAGTACCACGGTGCTAGTTGCACGCATCGGACAAAAAGGTAGAA TGAGGTATATCTGCATGCGTATACCCATCTTTTCCACCCCGCCCCCACTG TCGCCCTTGACGTATCATGGCACACCGCATGTTGGCTTGTACATTGTAGT TCGAAGACGAGCAATGGCTGGATCTTCGCCGCCTGGATCTGGTGGCCCCG ATCATGCTTGAGAGGCTGGACATCATGCAGGCGAAGGGCTGCGATGCTGT GGAGTGGGACAACGCCGACCTTCCCGTTCACGACGTGAGATACCAAGCGG ACGACAATATTGGTAGCGAGAAATCAACAGTCTCTAACCGATACATCGTA GAACCTGCAGTCATCAGTAACAAATACCGACCCAGGATCTGAAGGCGCTG GAATACGTAGTCAACGCCGCATTACAGTACGGTGTCGCCGTAAGCCGCCC GCTTAGTTTCGGAACCATATGGCAGACCTCATCAGTCCGTGCACATCTGC CACCCGCCACCGTTCCGTTAGTCGTTTCCTCAACGGCAGCTGGGTCTGAG CGGAGGCGGCCAGATCAGCGTGAGCGTCCAGATCGCGTACAACGCCTGGA TTGCGGCGCAGACGTACGCTCGCGGCATGGGGGTGGCCATGAAGAACAAC AACGAGGCCGCGGCGTTCCACGTTGACGACTACGACATGGTGGTCAACGA AGAATGCTGGATCAACGGGAACTGCAACAACTACGTGAGCATCGTTCTTG CGTGTTCAGAGCTCCCCTTTATCGTCTGGTCAGTGACACTTCCCAGTTGT GATCACAATCGTGTCTTCGGCAACCTGCAGTATACCTTGACCTTTATCAT CTGATGTAACGACAGCGAGTTTGGCTCGAGTATTGGTGTAGTGGTCGGGA CATTACGCGTCGTACTCTGCCGAGCGTGCGAGCCATCGTGTTTCCGGTTC TTCCCATTCTTTCTAAACACCACACCCCATGCATACCATTGTGTGTTTGT TGTTTGGTTTGATCGCAGTGGCCATGGATCAAGGCCGGCAAGCCGATCCT CAACACCGAGTACTTCACAACAAGGTGCATGTACTGCACCCAGGCCAACC TCATGGATATGTCAACCATCAAGAAGGTTCCTGACCTCACGTCTTGCCGG GTGAGTCCGCCAGTCAACCATCGCACCAGTGGCCACAGGGCGCCATCAAT TGCCAAGTCCTATCGATTCAACGGCGCACACGATGTATCCCATGCCGTTT GGGTTTTGGCAGAGATGGACGGCTACTGGTACCGCGAGTGGCTTACGCGG CGTATCCTTACCCTTCGCTGCGGTGCTATTGCCAAGCGTGATCGGAGCTT GTCCTCGCTTGCCTCTGAGGCCCCTCTCCTATTTCGGCCAGTTTTCTTCA CCACGACGACACTTTTGCGCTCCCGAACTGTCCACTTAACCAAATATCCC TCTTCCCCAGGCCGACTGTAAGTCAACCTTCGACAGCACGCAGTGTAGCG CCGCCTCCGTATCCGGGAGTGTGTCCTACCCAATCGACTGGACGGTCGGT ACCGGTGCCGCGATGGACGAGGATTGGTGCCCCATGACCCTCAACACAGC CACCGACGAATGCCCAAGCGACCGGTTCTTCGTGTGCGATCCGACGGTGA GCAGCTCCTCACTGCATTACGCTTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1547:4344..7119+

>mRNA_E-fasciculatus_F_contig1547.3827.1 ID=mRNA_E-fasciculatus_F_contig1547.3827.1|Name=mRNA_E-fasciculatus_F_contig1547.3827.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2118bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1547:4344..7119+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGCCGCAGTGGAATCTGCAACACCCTGACGGGAAAGTGCGCGTGCTACGG
CCTGTGGACTGGCCCTACCTGCGAGCGTGCGATCGGCGACTACTCGGTGC
CCGCCGCAGCTGACAACTGGTACCAACCGTCGCTGGGAACCACATGGGAG
TGGCAGATCGACGGTAAGAGTCCGCACGACGAGTTCTGCCGCAGTGGAAT
CTGCAACACCCTGACGGGAAAGTGCGCGTGCTACGGCCTGTGGACTGGCC
CTACCTGCGAGCGTGCGATCGGCGACTACTCGGTGCCCGCCGCAGCTGAC
AACTGGTACCAACCGTCGCTGGGAACCACATGGGAGTGGCAGATCGACGG
TAAGAGTCCGCACGACGAGTTCGGATCTCTGCACAACGTTGAGCTCTACG
ATATCGACTACTCGTACTCTTCGGCGGTCATCGCCGACCTCCAGAGCAAG
GGTAAGACTGCCATGTGCTACATCTCCGCCGGCACCTCGGAGGACTTCCG
CGAGGACATCAACCTCTTCCCTGAAGAGGTCAAGGGCGGCATCGTTTCGT
TCGGGGAAGGCGACACGGGATCTCTGCACAACGTTGAGCTCTACGATATC
GACTACTCGTACTCTTCGGCGGTCATCGCCGACCTCCAGAGCAAGGGTAA
GACTGCCATGTGCTACATCTCCGCCGGCACCTCGGAGGACTTCCGCGAGG
ACATCAACCTCTTCCCTGAAGAGGTCAAGGGCGGCATCGTTTCGTTCGGG
GAAGGCGACACGTTCGAAGACGAGCAATGGCTGGATCTTCGCCGCCTGGA
TCTGGTGGCCCCGATCATGCTTGAGAGGCTGGACATCATGCAGGCGAAGG
GCTGCGATGCTGTGGAGTGGGACAACGCCGACCTTCCCGTTCACGACTTC
GAAGACGAGCAATGGCTGGATCTTCGCCGCCTGGATCTGGTGGCCCCGAT
CATGCTTGAGAGGCTGGACATCATGCAGGCGAAGGGCTGCGATGCTGTGG
AGTGGGACAACGCCGACCTTCCCGTTCACGACCTGGGTCTGAGCGGAGGC
GGCCAGATCAGCGTGAGCGTCCAGATCGCGTACAACGCCTGGATTGCGGC
GCAGACGTACGCTCGCGGCATGGGGGTGGCCATGAAGAACAACAACGAGG
CCGCGGCGTTCCACGTTGACGACTACGACATGGTGGTCAACGAAGAATGC
TGGATCAACGGGAACTGCAACAACTACCTGGGTCTGAGCGGAGGCGGCCA
GATCAGCGTGAGCGTCCAGATCGCGTACAACGCCTGGATTGCGGCGCAGA
CGTACGCTCGCGGCATGGGGGTGGCCATGAAGAACAACAACGAGGCCGCG
GCGTTCCACGTTGACGACTACGACATGGTGGTCAACGAAGAATGCTGGAT
CAACGGGAACTGCAACAACTACTGGCCATGGATCAAGGCCGGCAAGCCGA
TCCTCAACACCGAGTACTTCACAACAAGGTGCATGTACTGCACCCAGGCC
AACCTCATGGATATGTCAACCATCAAGAAGGTTCCTGACCTCACGTCTTG
CCGGTGGCCATGGATCAAGGCCGGCAAGCCGATCCTCAACACCGAGTACT
TCACAACAAGGTGCATGTACTGCACCCAGGCCAACCTCATGGATATGTCA
ACCATCAAGAAGGTTCCTGACCTCACGTCTTGCCGGGCCGACTGTAAGTC
AACCTTCGACAGCACGCAGTGTAGCGCCGCCTCCGTATCCGGGAGTGTGT
CCTACCCAATCGACTGGACGGTCGGTACCGGTGCCGCGATGGACGAGGAT
TGGTGCCCCATGACCCTCAACACAGCCACCGACGAATGCCCAAGCGACCG
GTTCTTCGTGTGCGATCCGACGGTGAGCAGCTCCTCACTGCATTACGCTT
GAGCCGACTGTAAGTCAACCTTCGACAGCACGCAGTGTAGCGCCGCCTCC
GTATCCGGGAGTGTGTCCTACCCAATCGACTGGACGGTCGGTACCGGTGC
CGCGATGGACGAGGATTGGTGCCCCATGACCCTCAACACAGCCACCGACG
AATGCCCAAGCGACCGGTTCTTCGTGTGCGATCCGACGGTGAGCAGCTCC
TCACTGCATTACGCTTGA
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