mRNA_E-fasciculatus_F_contig15466.3825.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15466.3825.1
Unique NamemRNA_E-fasciculatus_F_contig15466.3825.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: D7FS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS37_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 5.320e-133
Identity = 199/218 (91.28%), Postives = 206/218 (94.50%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGSGAELVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGDTAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENVVVIEDAEPIDVGSDTLASSPAPTPAIPV 654
            GRNTHGQLGTGDSDDRLDG+G  LVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDS ETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFG NADGELGTGTT DVGLLP +MGD+L AAAIGDTAQDIA GGATTCAIVSDDSVICWGQGSSGQLGQGTDEN++VIED E IDVGSDT ASSP PTP+IP+
Sbjct:  216 GRNTHGQLGTGDSDDRLDGNGLALVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSPETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGANADGELGTGTTQDVGLLPTEMGDNLIAAAIGDTAQDIAAGGATTCAIVSDDSVICWGQGSSGQLGQGTDENIIVIEDVETIDVGSDTFASSPGPTPSIPI 433          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A2E8LE46_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LE46_9ACTN)

HSP 1 Score: 178 bits (452), Expect = 1.570e-48
Identity = 105/191 (54.97%), Postives = 127/191 (66.49%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGSGA---ELVAVDL-DGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQG 555
            G+N +GQLG GD++DR DG G     L AVDL  G  ATAI A  SH CALLDD SIKCWG N++GQLG GD  DRGD A+ +G NLPA+ LG+G   TAI  GS + CALLDD S KC+G+N  G+LG G T   G    +MGD+L A  +G   TA  I+  G  TCA++ D SV CWG+ + GQLGQG
Sbjct:  136 GQNQYGQLGLGDTNDRGDGFGLMGDNLPAVDLGSGRTATAITAKSSHFCALLDDASIKCWGRNATGQLGLGDTNDRGDGADEMGENLPAVDLGSGRTATAITAGSAHFCALLDDASMKCWGQNQFGQLGQGDTLSRGDTADEMGDNLPAVDLGSGRTAIAISADGNVTCALLDDASVKCWGRNNEGQLGQG 326          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A383F410_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383F410_9ZZZZ)

HSP 1 Score: 167 bits (423), Expect = 1.960e-48
Identity = 107/220 (48.64%), Postives = 131/220 (59.55%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGSGA---ELVAVDL-DGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTA----AAIGDTAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENVVVIEDAEP---IDVGSDTLASS 627
            G N  GQLG GD+  R  GSG     L  VDL  G  A AIAAG  HTCA+LD+ S+KCWG N+SGQLG GDD +RGD A  +G +L A+ LG+G    AI  G  +TCALLD+   KC+GEN +G+LG G  DD+G    +MG+SLTA    A    TA  I  G   TC ++  DSV CWG+   GQLG G  E     ED EP   ID+G    A++
Sbjct:    2 GSNASGQLGLGDNSTRGAGSGEMGDSLAIVDLGSGRTAKAIAAGNQHTCAILDNSSVKCWGANASGQLGLGDDDNRGDGANEMGDDLDAVDLGSGRTAKAIATGDSHTCALLDNALVKCWGENGNGQLGQGGIDDLGDGSGEMGESLTAITDSAGNSVTATSITTGTGYTCVLLDVDSVKCWGRNDYGQLGAGKTE-----EDHEPTLRIDLGDGITATA 216          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A7C1YL65_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YL65_9ACTN)

HSP 1 Score: 171 bits (434), Expect = 1.160e-46
Identity = 103/220 (46.82%), Postives = 136/220 (61.82%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGSG---AELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENV-----VVIEDAEPIDVGSDTLASS 627
            G N+ GQLG GD+ DR D  G   A L AVDL  G  ATAI AG +HTCALLD+D++KCWG N  GQLGQGD   RG     +G NLP I L  G   TAI     +TCALL +G+ KC+G N +G LG G TDD+G  P +MG++L    +G   TA  I  G + TCA++ + +V CWG  S GQLGQGT +++      + ++  P+D+G+   A++
Sbjct:   69 GSNSSGQLGQGDNTDRGDNPGEMGANLPAVDLGAGRTATAITAGTNHTCALLDNDTVKCWGNNVLGQLGQGDANSRGGDPGEMGDNLPTINLSRGGTATAISTSGVHTCALLHNGTVKCWGYNLNGGLGQGHTDDIGDNPGEMGNNLPPIDLGAGRTATAITAGDSHTCALLDNSTVKCWGDNSYGQLGQGTTDDIGDNPGEMGDNLPPVDLGAGRTATA 288          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN)

HSP 1 Score: 172 bits (437), Expect = 1.250e-46
Identity = 99/191 (51.83%), Postives = 123/191 (64.40%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGSGA---ELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQG 555
            G N+ GQLG G++DD  D  G     L AVDL  G  ATAI+AG SHTCALLDD ++KCWG  S G+LG GD   RGD A  +G NLP + LGTG   TA+  G+ +TCALLDDG+ KC+G   +G+LGTG    +G  P +MGD+L    +G   TA  IA G   +CA++ D  V CWG G SG+LGQG
Sbjct:  194 GNNSSGQLGQGNTDDIGDNPGEMGDNLPAVDLGTGRTATAISAGSSHTCALLDDGTVKCWGSGSFGRLGYGDLTKRGDGAGEMGDNLPPLELGTGRTATAVSAGNTHTCALLDDGTVKCWGGGFNGQLGTGDVTGLGDNPGEMGDNLPPVDLGSGRTAIAIAAGSRASCAVLDDGGVKCWGYGFSGRLGQG 384          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT)

HSP 1 Score: 171 bits (434), Expect = 1.460e-46
Identity = 97/195 (49.74%), Postives = 131/195 (67.18%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGS---GAELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDEN 567
            G N+ GQLG G +DDR DG+   G  L ++DL  G  ATAIAAG +H+CA+LD+ ++KCWG N +GQLG GD  +RGD A+ +G +L A+ LGTG    +I  G  +TCALLD+ S KC+G+ A+G++GTG T D+G    +MGDSLTA  +G   TA  I+ G + TCA++ + S+ CWG   SGQLG G   N
Sbjct:  329 GINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWGKNDAGQLGLGDTNNRGDGADEMGDDLDAVDLGTGRTAVSITAGYAHTCALLDNYSVKCWGDAAEGQMGTGKTFDLGDAAGEMGDSLTAIDLGTGRTATAISAGRSHTCAMLDNSSIKCWGSNDSGQLGLGDTSN 523          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A8J5X495_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X495_DIALT)

HSP 1 Score: 171 bits (432), Expect = 1.540e-46
Identity = 101/191 (52.88%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGS---GAELVAVDLDGS-VATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQG 555
            G N+ GQLG GD+ DR DG+   G +L  + L  +  A  I AGE+HTCALL+D S+KCWG N  GQLGQGD LDRGD A  +G NL  + LGT      I  G F+TCALLDDGSAKC+G+N  G+LG G   D G    +MGD L    +G   TA +IA GG  TCA++ D S  CWG  S GQLGQG
Sbjct:   11 GSNSDGQLGQGDTLDRGDGANEMGDDLAPILLGTNRTAVKITAGEAHTCALLNDGSVKCWGDNGYGQLGQGDGLDRGDGANDMGDNLAPVLLGTNRTAVEIVAGGFHTCALLDDGSAKCWGDNDYGQLGQGDGIDRGDGANEMGDDLAPILLGTNRTAVEIAAGGTHTCALLDDGSAKCWGDNSFGQLGQG 201          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: C1E793_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E793_MICCC)

HSP 1 Score: 166 bits (419), Expect = 2.680e-46
Identity = 101/215 (46.98%), Postives = 132/215 (61.40%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGSGA--ELVAVDL-DGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGDTAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENV-----VVIEDAEPIDVGSDTLA 621
            G  ++G+LG GD+ +R DG+G    L +VDL  G  A  IAAGESHTCA+LDD S KCWG  ++G+LG GD  +RGD A  +G NLP++ LG+G     I  G  +TCA+LDDGS KC+G  A+G LG G T + G    +MGD+L A     T + I  G A TCA++ D SV CWG G +GQLG G  +N       + E    +D+GSD  A
Sbjct:   68 GSGSNGRLGYGDTQNRGDGAGEMDNLPSVDLGSGRSAKFIAAGESHTCAILDDGSAKCWGSGANGRLGYGDTQNRGDGAGEMGDNLPSVDLGSGRSAKFIAAGESHTCAILDDGSVKCWGSGANGRLGYGDTQNRGDGAGEMGDNLRAIHFSPTVKTIVTGKAFTCALLYDGSVKCWGLGQNGQLGYGDTQNRGDGPGEMGERLPSVDLGSDRSA 282          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A7Z9UFE8_9BACT (Big_5 domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9UFE8_9BACT)

HSP 1 Score: 171 bits (434), Expect = 2.760e-46
Identity = 104/215 (48.37%), Postives = 136/215 (63.26%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGS---GAELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENVVVIEDAEPIDVGSDTLASS 627
            G+N  GQLG G++ +R D S   G  L  VDL  G  A AIAAG+ HTCA+LD+ SIKCWG N+SGQLG GD  +RGD +  +G  LPAI LG+G   TAI  G+ +TCA+LD+ S KC+G NA G+LG G T + G   ++MGD+L A  +G   TA+ I  GG+ TC I+ D S+ CWG+   GQLG G   N     +A  +D+GS   A +
Sbjct:  272 GKNNLGQLGLGNTSNRGDNSSEMGDNLPVVDLGTGRTAKAIAAGDYHTCAILDNASIKCWGANASGQLGIGDTNNRGDESSEMGDILPAIDLGSGRTATAITAGNQHTCAILDNASIKCWGANASGQLGIGDTSNRGDESSEMGDTLPAVDLGSGRTAKVIVAGGSHTCTILDDSSIKCWGENDQGQLGLG---NTTDSLNASVVDMGSGITAKA 483          
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 167 bits (423), Expect = 7.480e-46
Identity = 102/191 (53.40%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    1 GRNTHGQLGTGDSDDRLDGSGA---ELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQG 555
            G N  GQLG GD+  R D  G     L AV L  G  ATAI+AG  HTCALLD+ SIKCWG N++GQLG GD   RGD    +G  LPAI LGTG   TAI  G  +TCALLD+GS KC+G NA G+LG G T D G  P +MGD+L A  +G   TA  I+ GG  TCA++ + S+ CWG  + GQLG G
Sbjct:   67 GANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLG 257          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS37_ECTSI5.320e-13391.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2E8LE46_9ACTN1.570e-4854.97Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A383F410_9ZZZZ1.960e-4848.64Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A7C1YL65_9ACTN1.160e-4646.82Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
A0A7C1YRK2_9ACTN1.250e-4651.83Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A520PN85_9PROT1.460e-4649.74Big_5 domain-containing protein (Fragment) n=1 Tax... [more]
A0A8J5X495_DIALT1.540e-4652.88Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
C1E793_MICCC2.680e-4646.98Uncharacterized protein (Fragment) n=1 Tax=Micromo... [more]
A0A7Z9UFE8_9BACT2.760e-4648.37Big_5 domain-containing protein n=1 Tax=Candidatus... [more]
A0A835T669_9CHLO7.480e-4653.40Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15466contigE-fasciculatus_F_contig15466:998..2589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons4
Model size654
Cds size390
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15466.3825.1prot_E-fasciculatus_F_contig15466.3825.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15466 1532..2549 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928024.3252769-UTR-E-fasciculatus_F_contig15466:997..11301622928024.3252769-UTR-E-fasciculatus_F_contig15466:997..1130Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15466 998..1130 -
1695995792.7425663-UTR-E-fasciculatus_F_contig15466:997..11301695995792.7425663-UTR-E-fasciculatus_F_contig15466:997..1130Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15466 998..1130 -
1622928024.3388674-UTR-E-fasciculatus_F_contig15466:1440..15311622928024.3388674-UTR-E-fasciculatus_F_contig15466:1440..1531Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15466 1441..1531 -
1695995792.751745-UTR-E-fasciculatus_F_contig15466:1440..15311695995792.751745-UTR-E-fasciculatus_F_contig15466:1440..1531Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15466 1441..1531 -
1622928024.3875039-UTR-E-fasciculatus_F_contig15466:2549..25891622928024.3875039-UTR-E-fasciculatus_F_contig15466:2549..2589Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15466 2550..2589 -
1695995792.7941995-UTR-E-fasciculatus_F_contig15466:2549..25891695995792.7941995-UTR-E-fasciculatus_F_contig15466:2549..2589Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15466 2550..2589 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928024.3518238-CDS-E-fasciculatus_F_contig15466:1531..16171622928024.3518238-CDS-E-fasciculatus_F_contig15466:1531..1617Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15466 1532..1617 -
1695995792.7617066-CDS-E-fasciculatus_F_contig15466:1531..16171695995792.7617066-CDS-E-fasciculatus_F_contig15466:1531..1617Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15466 1532..1617 -
1622928024.3632648-CDS-E-fasciculatus_F_contig15466:1963..21401622928024.3632648-CDS-E-fasciculatus_F_contig15466:1963..2140Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15466 1964..2140 -
1695995792.771936-CDS-E-fasciculatus_F_contig15466:1963..21401695995792.771936-CDS-E-fasciculatus_F_contig15466:1963..2140Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15466 1964..2140 -
1622928024.3773975-CDS-E-fasciculatus_F_contig15466:2422..25491622928024.3773975-CDS-E-fasciculatus_F_contig15466:2422..2549Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15466 2423..2549 -
1695995792.781445-CDS-E-fasciculatus_F_contig15466:2422..25491695995792.781445-CDS-E-fasciculatus_F_contig15466:2422..2549Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15466 2423..2549 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15466.3825.1

>prot_E-fasciculatus_F_contig15466.3825.1 ID=prot_E-fasciculatus_F_contig15466.3825.1|Name=mRNA_E-fasciculatus_F_contig15466.3825.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=130bp
MTAWTGLALSLWRWISMVPSPPPSPPESRTLARSLTTTPSSAGVLTAAAS
WARATTSTGETPRRPSAPTSPPSPWGPATCPRPSTAAPSTLALSSTMGPP
SASARTRTASSAPARPMMSACSPRTWVTA*
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mRNA from alignment at E-fasciculatus_F_contig15466:998..2589-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15466.3825.1 ID=mRNA_E-fasciculatus_F_contig15466.3825.1|Name=mRNA_E-fasciculatus_F_contig15466.3825.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1592bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15466:998..2589- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGGCGCAACACTCACGGCCAGCTCGGTACCGGCGACAGCGATGACCGCCT GGACGGGTCTGGCGCTGAGCTTGTGGCGGTGGATCTCGATGGTTCCGTCG CCACCGCCATCGCCGCCGGAGAGTCGCACACTTGCGCGCTCCTTGACGAC GACTCCATCAAGTGCTGGTAAGGACACAATCAACTGTTGAAAAAATTGTT TTCCTGTCCGGAAGGGGGGCGATGGGGGAGTGGGTGGCAACGATTAGTTT GGGTGTCTCGAAGAGTGGCATGTATAAAGACTTGTGGGACACGTGTAGTT ATGCAGTTGGGTTGCTCTTGACGGACGGGTTTCCTCCGCACAGAGATGTA TGCGTACTGCTCTATGTTTACCACTTTTCTCTCTTCGCCTCTTACTGACT GTCTGCCTCTCGCCGCTCCCCGCTGCCAAATTTGTACTATTTACCACAGG GGTCTTAACAGCAGCGGCCAGCTGGGCCAGGGCGACGACCTCGACAGGGG AGACTCCGCGGAGACCCTCGGCGCCAACCTCCCCGCCATCGCCCTGGGGA CCGGCGACGTGCCCACGGCCATCGACTGCGGCTCCTTCTACACTTGCGCT CTCCTCGACGATGGGTCCGCCAAGTGGTGAGTGTCAAAAGAGTGTCAAAG AGTGTCAAGAAACACGGTAGTGGTGCTGGCGGCCGGCCAGGAGTGTGGTG GCGGCACAAGATCGTTCTGCAGCACGTGCTGAGTGTGCTTATTGCCCCCG TATGCACAGATGGAGAGGACCTCCGCTCCGTTGCTAGAAGGTAGACGTAC CATGCCTTTTGTCCACATGAACCGCCGTATATTTTTTGTCCGCACGTGCT CCTTTTTCCTCTCCTCCTCTGGTTACCATCCATACCCTTGTTTTTTTGTG CTTTGTCCATGCATCCTTCTTGATCATTTTTTTCTCTGCGCCCCCGCCCG ACCCACGCCTCTTCTTTCGCAGCTTCGGCGAGAACGCGGACGGCGAGCTC GGCACCGGCACGACCGATGATGTCGGCCTGCTCCCCGCGGACATGGGTGA CAGCCTGACCGCTGCTGCCATCGGTGACACCGCTCAGGACATTGCCGGTG GCGGCGCCACTACGTGCGCCATCGTCTCGGACGACTCCGTCATTTGCTGG TGAGGAAATGAGAACCAGTTTTGACTTGGGGATGATGCTGTCCGGAGTAT TTCGCGGGAGGATTTGGGTGTCGTGTACTCCTGGCTGCTGTGGTGATCGC TCTTGCTTCGTGACCACAATGTTTTTGCCTTGATGTGTGTCCGGCAAATC ATAGTGTAGGTTGATGCAAGTCACTAGCCAAATCGGCCAGCGTAACTCCG CCTTGACAGGGCCGCACATCCTTGCCTGCATTCCCTACCGTAACGCTTGC TTTCCGCTTCCGTACCGCATCGCTTGCTTTCCGCGCCGCTCAATGCTTGC GACATGTAGGGGCCAGGGAAGCTCTGGCCAACTCGGGCAGGGCACCGACG AAAACGTGGTCGTGATCGAAGACGCTGAACCGATCGACGTCGGTTCGGAC ACCTTGGCCTCTTCCCCGGCCCCCACTCCCGCCATCCCGGTA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15466:998..2589-

>mRNA_E-fasciculatus_F_contig15466.3825.1 ID=mRNA_E-fasciculatus_F_contig15466.3825.1|Name=mRNA_E-fasciculatus_F_contig15466.3825.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=780bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15466:998..2589- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACCGCCTGGACGGGTCTGGCGCTGAGCTTGTGGCGGTGGATCTCGAT
GGTTCCGTCGCCACCGCCATCGCCGCCGGAGAGTCGCACACTTGCGCGCT
CCTTGACGACGACTCCATCAAGTGCTGATGACCGCCTGGACGGGTCTGGC
GCTGAGCTTGTGGCGGTGGATCTCGATGGTTCCGTCGCCACCGCCATCGC
CGCCGGAGAGTCGCACACTTGCGCGCTCCTTGACGACGACTCCATCAAGT
GCTGGGGTCTTAACAGCAGCGGCCAGCTGGGCCAGGGCGACGACCTCGAC
AGGGGAGACTCCGCGGAGACCCTCGGCGCCAACCTCCCCGCCATCGCCCT
GGGGACCGGCGACGTGCCCACGGCCATCGACTGCGGCTCCTTCTACACTT
GCGCTCTCCTCGACGATGGGTCCGCCAAGTGGGGTCTTAACAGCAGCGGC
CAGCTGGGCCAGGGCGACGACCTCGACAGGGGAGACTCCGCGGAGACCCT
CGGCGCCAACCTCCCCGCCATCGCCCTGGGGACCGGCGACGTGCCCACGG
CCATCGACTGCGGCTCCTTCTACACTTGCGCTCTCCTCGACGATGGGTCC
GCCAAGTGCTTCGGCGAGAACGCGGACGGCGAGCTCGGCACCGGCACGAC
CGATGATGTCGGCCTGCTCCCCGCGGACATGGGTGACAGCCTGACTTCGG
CGAGAACGCGGACGGCGAGCTCGGCACCGGCACGACCGATGATGTCGGCC
TGCTCCCCGCGGACATGGGTGACAGCCTGA
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