mRNA_E-fasciculatus_F_contig15466.3825.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: D7FS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS37_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 5.320e-133 Identity = 199/218 (91.28%), Postives = 206/218 (94.50%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGSGAELVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGDTAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENVVVIEDAEPIDVGSDTLASSPAPTPAIPV 654
GRNTHGQLGTGDSDDRLDG+G LVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDS ETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFG NADGELGTGTT DVGLLP +MGD+L AAAIGDTAQDIA GGATTCAIVSDDSVICWGQGSSGQLGQGTDEN++VIED E IDVGSDT ASSP PTP+IP+
Sbjct: 216 GRNTHGQLGTGDSDDRLDGNGLALVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSPETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGANADGELGTGTTQDVGLLPTEMGDNLIAAAIGDTAQDIAAGGATTCAIVSDDSVICWGQGSSGQLGQGTDENIIVIEDVETIDVGSDTFASSPGPTPSIPI 433
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A2E8LE46_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LE46_9ACTN) HSP 1 Score: 178 bits (452), Expect = 1.570e-48 Identity = 105/191 (54.97%), Postives = 127/191 (66.49%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGSGA---ELVAVDL-DGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQG 555
G+N +GQLG GD++DR DG G L AVDL G ATAI A SH CALLDD SIKCWG N++GQLG GD DRGD A+ +G NLPA+ LG+G TAI GS + CALLDD S KC+G+N G+LG G T G +MGD+L A +G TA I+ G TCA++ D SV CWG+ + GQLGQG
Sbjct: 136 GQNQYGQLGLGDTNDRGDGFGLMGDNLPAVDLGSGRTATAITAKSSHFCALLDDASIKCWGRNATGQLGLGDTNDRGDGADEMGENLPAVDLGSGRTATAITAGSAHFCALLDDASMKCWGQNQFGQLGQGDTLSRGDTADEMGDNLPAVDLGSGRTAIAISADGNVTCALLDDASVKCWGRNNEGQLGQG 326
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A383F410_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383F410_9ZZZZ) HSP 1 Score: 167 bits (423), Expect = 1.960e-48 Identity = 107/220 (48.64%), Postives = 131/220 (59.55%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGSGA---ELVAVDL-DGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTA----AAIGDTAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENVVVIEDAEP---IDVGSDTLASS 627
G N GQLG GD+ R GSG L VDL G A AIAAG HTCA+LD+ S+KCWG N+SGQLG GDD +RGD A +G +L A+ LG+G AI G +TCALLD+ KC+GEN +G+LG G DD+G +MG+SLTA A TA I G TC ++ DSV CWG+ GQLG G E ED EP ID+G A++
Sbjct: 2 GSNASGQLGLGDNSTRGAGSGEMGDSLAIVDLGSGRTAKAIAAGNQHTCAILDNSSVKCWGANASGQLGLGDDDNRGDGANEMGDDLDAVDLGSGRTAKAIATGDSHTCALLDNALVKCWGENGNGQLGQGGIDDLGDGSGEMGESLTAITDSAGNSVTATSITTGTGYTCVLLDVDSVKCWGRNDYGQLGAGKTE-----EDHEPTLRIDLGDGITATA 216
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A7C1YL65_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YL65_9ACTN) HSP 1 Score: 171 bits (434), Expect = 1.160e-46 Identity = 103/220 (46.82%), Postives = 136/220 (61.82%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGSG---AELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENV-----VVIEDAEPIDVGSDTLASS 627
G N+ GQLG GD+ DR D G A L AVDL G ATAI AG +HTCALLD+D++KCWG N GQLGQGD RG +G NLP I L G TAI +TCALL +G+ KC+G N +G LG G TDD+G P +MG++L +G TA I G + TCA++ + +V CWG S GQLGQGT +++ + ++ P+D+G+ A++
Sbjct: 69 GSNSSGQLGQGDNTDRGDNPGEMGANLPAVDLGAGRTATAITAGTNHTCALLDNDTVKCWGNNVLGQLGQGDANSRGGDPGEMGDNLPTINLSRGGTATAISTSGVHTCALLHNGTVKCWGYNLNGGLGQGHTDDIGDNPGEMGNNLPPIDLGAGRTATAITAGDSHTCALLDNSTVKCWGDNSYGQLGQGTTDDIGDNPGEMGDNLPPVDLGAGRTATA 288
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN) HSP 1 Score: 172 bits (437), Expect = 1.250e-46 Identity = 99/191 (51.83%), Postives = 123/191 (64.40%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGSGA---ELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQG 555
G N+ GQLG G++DD D G L AVDL G ATAI+AG SHTCALLDD ++KCWG S G+LG GD RGD A +G NLP + LGTG TA+ G+ +TCALLDDG+ KC+G +G+LGTG +G P +MGD+L +G TA IA G +CA++ D V CWG G SG+LGQG
Sbjct: 194 GNNSSGQLGQGNTDDIGDNPGEMGDNLPAVDLGTGRTATAISAGSSHTCALLDDGTVKCWGSGSFGRLGYGDLTKRGDGAGEMGDNLPPLELGTGRTATAVSAGNTHTCALLDDGTVKCWGGGFNGQLGTGDVTGLGDNPGEMGDNLPPVDLGSGRTAIAIAAGSRASCAVLDDGGVKCWGYGFSGRLGQG 384
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT) HSP 1 Score: 171 bits (434), Expect = 1.460e-46 Identity = 97/195 (49.74%), Postives = 131/195 (67.18%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGS---GAELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDEN 567
G N+ GQLG G +DDR DG+ G L ++DL G ATAIAAG +H+CA+LD+ ++KCWG N +GQLG GD +RGD A+ +G +L A+ LGTG +I G +TCALLD+ S KC+G+ A+G++GTG T D+G +MGDSLTA +G TA I+ G + TCA++ + S+ CWG SGQLG G N
Sbjct: 329 GINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWGKNDAGQLGLGDTNNRGDGADEMGDDLDAVDLGTGRTAVSITAGYAHTCALLDNYSVKCWGDAAEGQMGTGKTFDLGDAAGEMGDSLTAIDLGTGRTATAISAGRSHTCAMLDNSSIKCWGSNDSGQLGLGDTSN 523
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A8J5X495_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X495_DIALT) HSP 1 Score: 171 bits (432), Expect = 1.540e-46 Identity = 101/191 (52.88%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGS---GAELVAVDLDGS-VATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQG 555
G N+ GQLG GD+ DR DG+ G +L + L + A I AGE+HTCALL+D S+KCWG N GQLGQGD LDRGD A +G NL + LGT I G F+TCALLDDGSAKC+G+N G+LG G D G +MGD L +G TA +IA GG TCA++ D S CWG S GQLGQG
Sbjct: 11 GSNSDGQLGQGDTLDRGDGANEMGDDLAPILLGTNRTAVKITAGEAHTCALLNDGSVKCWGDNGYGQLGQGDGLDRGDGANDMGDNLAPVLLGTNRTAVEIVAGGFHTCALLDDGSAKCWGDNDYGQLGQGDGIDRGDGANEMGDDLAPILLGTNRTAVEIAAGGTHTCALLDDGSAKCWGDNSFGQLGQG 201
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: C1E793_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E793_MICCC) HSP 1 Score: 166 bits (419), Expect = 2.680e-46 Identity = 101/215 (46.98%), Postives = 132/215 (61.40%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGSGA--ELVAVDL-DGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGDTAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENV-----VVIEDAEPIDVGSDTLA 621
G ++G+LG GD+ +R DG+G L +VDL G A IAAGESHTCA+LDD S KCWG ++G+LG GD +RGD A +G NLP++ LG+G I G +TCA+LDDGS KC+G A+G LG G T + G +MGD+L A T + I G A TCA++ D SV CWG G +GQLG G +N + E +D+GSD A
Sbjct: 68 GSGSNGRLGYGDTQNRGDGAGEMDNLPSVDLGSGRSAKFIAAGESHTCAILDDGSAKCWGSGANGRLGYGDTQNRGDGAGEMGDNLPSVDLGSGRSAKFIAAGESHTCAILDDGSVKCWGSGANGRLGYGDTQNRGDGAGEMGDNLRAIHFSPTVKTIVTGKAFTCALLYDGSVKCWGLGQNGQLGYGDTQNRGDGPGEMGERLPSVDLGSDRSA 282
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A7Z9UFE8_9BACT (Big_5 domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9UFE8_9BACT) HSP 1 Score: 171 bits (434), Expect = 2.760e-46 Identity = 104/215 (48.37%), Postives = 136/215 (63.26%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGS---GAELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQGTDENVVVIEDAEPIDVGSDTLASS 627
G+N GQLG G++ +R D S G L VDL G A AIAAG+ HTCA+LD+ SIKCWG N+SGQLG GD +RGD + +G LPAI LG+G TAI G+ +TCA+LD+ S KC+G NA G+LG G T + G ++MGD+L A +G TA+ I GG+ TC I+ D S+ CWG+ GQLG G N +A +D+GS A +
Sbjct: 272 GKNNLGQLGLGNTSNRGDNSSEMGDNLPVVDLGTGRTAKAIAAGDYHTCAILDNASIKCWGANASGQLGIGDTNNRGDESSEMGDILPAIDLGSGRTATAITAGNQHTCAILDNASIKCWGANASGQLGIGDTSNRGDESSEMGDTLPAVDLGSGRTAKVIVAGGSHTCTILDDSSIKCWGENDQGQLGLG---NTTDSLNASVVDMGSGITAKA 483
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 167 bits (423), Expect = 7.480e-46 Identity = 102/191 (53.40%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 1 GRNTHGQLGTGDSDDRLDGSGA---ELVAVDLD-GSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLDRGDSAETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGENADGELGTGTTDDVGLLPADMGDSLTAAAIGD--TAQDIAGGGATTCAIVSDDSVICWGQGSSGQLGQG 555
G N GQLG GD+ R D G L AV L G ATAI+AG HTCALLD+ SIKCWG N++GQLG GD RGD +G LPAI LGTG TAI G +TCALLD+GS KC+G NA G+LG G T D G P +MGD+L A +G TA I+ GG TCA++ + S+ CWG + GQLG G
Sbjct: 67 GANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLG 257 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15466.3825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15466.3825.1 >prot_E-fasciculatus_F_contig15466.3825.1 ID=prot_E-fasciculatus_F_contig15466.3825.1|Name=mRNA_E-fasciculatus_F_contig15466.3825.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=130bp MTAWTGLALSLWRWISMVPSPPPSPPESRTLARSLTTTPSSAGVLTAAASback to top mRNA from alignment at E-fasciculatus_F_contig15466:998..2589- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15466.3825.1 ID=mRNA_E-fasciculatus_F_contig15466.3825.1|Name=mRNA_E-fasciculatus_F_contig15466.3825.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1592bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15466:998..2589- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15466:998..2589- >mRNA_E-fasciculatus_F_contig15466.3825.1 ID=mRNA_E-fasciculatus_F_contig15466.3825.1|Name=mRNA_E-fasciculatus_F_contig15466.3825.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=780bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15466:998..2589- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |