mRNA_E-fasciculatus_F_contig1545.3818.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: D8LEE0_ECTSI (DUF2431 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE0_ECTSI) HSP 1 Score: 576 bits (1484), Expect = 1.120e-196 Identity = 378/525 (72.00%), Postives = 388/525 (73.90%), Query Frame = 3
Query: 129 MGKFRGHQDKSRRGREKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQRGAVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGD--AGEEVSGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVRPGGAASSVSGQPVATANNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDPDGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDRAVADANGKTNRGKKKKKTSETGGGSGVPSGSEAEGVDEGKGVASNGASKRGMLQPPVQKKXXXXXXXXXXXXXXXXXXXXXXXXXXAEGTPRDEGLPQEG--VSGNKAKSPKRKRGKYVVSSTKKRPRD 1691
MGKFRGHQDKSRRGREKK +QRG VGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAG GRGD G V+GEK RVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESEL+MVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVR GGAASS + + XXXXXXXXXXXXXXXXXXXXXXXXX GDPDGGL GVD+A ADANG+ NRGKKKK T E GG GVPSGSEAE V+EGKG SNGASKRGMLQPPVQKK XXXXXXXXXXXXXXXXX + NKAKSPKRKRGKYVV+S KKRPRD
Sbjct: 1 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPGRL-QQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVRRGGAASSAN-----SVETXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKK-TGEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPANKAKSPKRKRGKYVVNSAKKRPRD 518
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: D8LED8_ECTSI (DUF2431 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED8_ECTSI) HSP 1 Score: 293 bits (750), Expect = 6.550e-90 Identity = 170/288 (59.03%), Postives = 186/288 (64.58%), Query Frame = 3
Query: 129 MGKFRGHQDKSRRGREKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQ-RGAVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGAR-TNVFCRARSELDDN 986
MGKFRGHQD+S RGRE K +Q R AVG KRKLKHVTYAKEHSVL+VGDG FSF + HRGT AGVVATSLDS KAVLKKYP+AETWLPKLEADG Q + GG R + VSGEK R+ F RVVFNFPHTGAQ THLNR+LI DFFASTKGLVKCAA GG VHVTLKDKPP+SGWN + ++ V DPSVFPGY +STTDPQA +F+A GAR TNV C ARSELDDN
Sbjct: 1 MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHAAAQAESTVSGGDSLGSGNPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSR----------GGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGV---PGDPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDN 274
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: A0A836CCP6_9STRA (DUF2431 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP6_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.370e-60 Identity = 111/202 (54.95%), Postives = 138/202 (68.32%), Query Frame = 3
Query: 303 QRGAVGAKRKL-KHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTT 905
Q A RK+ K V+YA ++L+ GDGDFSFTRG+++HR +GAGVVATSLDS VL KYP A WL +L AD A+V H VDATRLE+ + + + LFDRVVFNFPHTG QR HLNRNL+R+FF S +G VKCA GGEVHVTLK+ PPY+GW +K A + ++ +R LAFDP+ FPGYRH +
Sbjct: 64 QSALAPAVRKVPKTVSYAANSTILVCGDGDFSFTRGLLKHRRSGAGVVATSLDSHDVVLSKYPDALEWLDRL-AD-AKVLHGVDATRLEQAV-----------------RPQQLFDRVVFNFPHTGEQRVHLNRNLLRNFFRSARGYVKCAPDGGEVHVTLKEGPPYNGWEIKEAAAAAGMLPIRTLAFDPNQFPGYRHQVS 246
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: G4YGB3_PHYSP (DUF2431 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YGB3_PHYSP) HSP 1 Score: 180 bits (457), Expect = 4.640e-48 Identity = 99/216 (45.83%), Postives = 131/216 (60.65%), Query Frame = 3
Query: 348 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRV--LFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNV 989
YA E VL++GDGDFSF+RG+++HRGTG GV+ATS DSE V KKYP A+ + + + V H VDAT+L E G G K V F +VFNFPH+G QR H+NR L+ +FF S + + A GE HVTLK +PPYS W ++ A+++ V+ F+ +FPGYRH TTDPQAKKF+ T VF RS++ + V
Sbjct: 40 YAAEDDVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESQVRKKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQQVKTGAG---------MKAVPDFFKYIVFNFPHSGQQRVHINRALLLNFFGSARDRL---TAHGEAHVTLKTRPPYSNWFIEDQAKDAGFVLKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRSKVRNRV 243
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: F0W3R3_9STRA (Uncharacterized protein AlNc14C14G1639 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3R3_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.660e-47 Identity = 93/203 (45.81%), Postives = 128/203 (63.05%), Query Frame = 3
Query: 348 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVF 956
Y K S+LIVGDGDFSF++ ++ G ++ATS D EKAV +KY A++ + ++ GA V H VDAT+L++TL V+G K LFD V+FNFPHTG QR HLNRNL+RDFF S + ++ GEVH+TLK++PPYS W ++ AR+S ++ FD ++PGY+H TTDP AK F+ T +F
Sbjct: 28 YTKGSSILIVGDGDFSFSKALLSICECGQRLIATSFDDEKAVFEKYANAKSCIQYIKTHGAYVLHRVDATQLDQTLW-----------RVNGLTK--LFDYVIFNFPHTGQQRVHLNRNLLRDFFQSARTILTPL---GEVHITLKNRPPYSNWQIEKFARDSHYLLKARQKFDSRLYPGYQHRTTDPLAKFFETELCTTYIF 214
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: D0MYL5_PHYIT (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MYL5_PHYIT) HSP 1 Score: 176 bits (446), Expect = 7.490e-47 Identity = 101/225 (44.89%), Postives = 133/225 (59.11%), Query Frame = 3
Query: 309 GAVGAKRKLKHVT-------YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRV--LFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVF 956
G GAKR+ +H T YA + +VL++GDGDFSF+RG+++HR TG GV+ATS DSE V +KYP A+ + + + V H VDAT+L E G G K + F +VFNFPH+G QR H+NR L+ +FF S + + GE HVTLK +PPYS W ++ A+ + VM FD +FPGYRH TTDPQAKKF+A T VF
Sbjct: 17 GNSGAKRQ-RHGTQETSTQLYAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFELPQKVKTGTG---------LKTIPDFFQYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TVRGEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQFDIKLFPGYRHRTTDPQAKKFEAHLCVTYVF 228
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: M4BFN6_HYAAE (DUF2431 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFN6_HYAAE) HSP 1 Score: 179 bits (454), Expect = 1.100e-46 Identity = 105/236 (44.49%), Postives = 139/236 (58.90%), Query Frame = 3
Query: 348 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVRPGGAASSVSGQ 1055
YA + +VLIVGDGDFSF+RG+++HRGTG G++ATS DS+ V KY A + +++ V H VDAT+L E G G + +S +F ++FNFPH+G QR H+NR L+ +FF S + + + GEVHVTLK +PPYS W V+ A+E+ V+ FD +FPGYRH TTDPQAKKFD T VF RS+ E A V G AA+ S Q
Sbjct: 39 YAPKDTVLIVGDGDFSFSRGLVKHRGTGLGIIATSFDSDSQVCAKYSNAHECIAAVQSSLGLVLHDVDATKLLELPQHVQTGTGS--KTISD-----VFQYIIFNFPHSGQQRVHINRALLLNFFESARDRL---SVHGEVHVTLKTQPPYSNWFVEDRAKEAGFVLKERRKFDSRLFPGYRHRTTDPQAKKFDLDLCVTFVFVVNRSKYP--FQERQAELKAVSAGIAATEASEQ 262
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: A0A1V9ZN60_9STRA (DUF2431 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZN60_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.520e-46 Identity = 90/223 (40.36%), Postives = 128/223 (57.40%), Query Frame = 3
Query: 348 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVI 1016
Y + +L++GDGDF+F++G++ HRG+G ++ATS DS AV KY A T + + A V H +DAT+L++ V + LFD ++FNFPH+G QR H+NR L+ DFF S + +K GEVH++LK+KPPYS WNV+ A+ S V+ F +FPGY H TTDP AKKF+A T VF RS ++ P++
Sbjct: 33 YTAKDVILVLGDGDFTFSKGLVEHRGSGINLIATSFDSSTAVRDKYKNAYTCINAIRQAKAHVLHDIDATKLDQL--------------VHNDAVPALFDYIIFNFPHSGEQRVHINRVLLLDFFGSARSKLKFR---GEVHISLKNKPPYSNWNVEDQAKASGFVLKERRPFRSKLFPGYNHRTTDPDAKKFEADQCTTYVFIVDRSRYPVPTEQPPKTPLV 238
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: A0A225WPB9_9STRA (DUF2431 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPB9_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.700e-46 Identity = 97/220 (44.09%), Postives = 131/220 (59.55%), Query Frame = 3
Query: 324 KRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRV--LFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSEL 977
K++ YA + +VL++GDGDFSF+RG+++HRGTG GV+ATS DSE V KYP A+ + + + V H VDAT+L E G G K V F +VFNFPH+G QR H+NR L+ +FF S + + A GE HVTLK +PPYS W ++ A+ + VM F+ +FPGYRH TTDPQAKKF+ T VF R+++
Sbjct: 26 KQEASTQVYAADDTVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESKVRSKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQQVKTGAG---------LKPVPDFFHYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TAQGEAHVTLKTRPPYSNWFIEEQAKAAGFVMKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRAKV 233
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Match: A0A833SYA2_PHYIN (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SYA2_PHYIN) HSP 1 Score: 177 bits (450), Expect = 3.950e-46 Identity = 103/231 (44.59%), Postives = 136/231 (58.87%), Query Frame = 3
Query: 309 GAVGAKRKLKHVT-------YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGGGRGDAGEEVSGEKKRV--LFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELVMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSE 974
G GAKR+ +H T YA + +VL++GDGDFSF+RG+++HR TG GV+ATS DSE V +KYP A+ + + + V H VDAT+L E G G K + F +VFNFPH+G QR H+NR L+ +FF S + + GE HVTLK +PPYS W ++ A+ + VM FD +FPGYRH TTDPQAKKF+A T VF RS+
Sbjct: 17 GNSGAKRQ-RHGTQETSTQLYAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFELPQKVKTGTG---------LKTIPDFFQYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TVRGEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQFDIKLFPGYRHRTTDPQAKKFEAHLCVTYVFVVNRSK 234 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1545.3818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1545.3818.1 >prot_E-fasciculatus_F_contig1545.3818.1 ID=prot_E-fasciculatus_F_contig1545.3818.1|Name=mRNA_E-fasciculatus_F_contig1545.3818.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=522bp MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRATAAQAESVVSGGDSLSSback to top mRNA from alignment at E-fasciculatus_F_contig1545:1757..6683+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1545.3818.1 ID=mRNA_E-fasciculatus_F_contig1545.3818.1|Name=mRNA_E-fasciculatus_F_contig1545.3818.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4927bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1545:1757..6683+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1545:1757..6683+ >mRNA_E-fasciculatus_F_contig1545.3818.1 ID=mRNA_E-fasciculatus_F_contig1545.3818.1|Name=mRNA_E-fasciculatus_F_contig1545.3818.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3132bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1545:1757..6683+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |