prot_E-fasciculatus_F_contig15445.3814.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15445.3814.1
Unique Nameprot_E-fasciculatus_F_contig15445.3814.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length59
Homology
BLAST of mRNA_E-fasciculatus_F_contig15445.3814.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 6.310e-25
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 GTLPVELARLLDKLDSLSFLDLDRNPWEHPPEAIVAGGLQAVRGYYDAIFMGGTTAVTR 59
            GTLPV+LARLLD+ D L  LDL RNPWEHPPEAIVAGG+QAVRGYYDA+F GGTTAVTR
Sbjct:  482 GTLPVDLARLLDRFDGLVTLDLSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTR 540          
BLAST of mRNA_E-fasciculatus_F_contig15445.3814.1 vs. uniprot
Match: A0A6H5KUH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH8_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.860e-24
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 GTLPVELARLLDKLDSLSFLDLDRNPWEHPPEAIVAGGLQAVRGYYDAIFMGGTTAVTR 59
            GTLPV+LARLLD LD LS   + RNPWEHPPEAIV GGLQ VRGYY+A+FMGGTTAVTR
Sbjct:  191 GTLPVDLARLLDMLDGLSSWKVGRNPWEHPPEAIVGGGLQVVRGYYEAMFMGGTTAVTR 249          
BLAST of mRNA_E-fasciculatus_F_contig15445.3814.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 5.580e-24
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 GTLPVELARLLDKLDSLSFLDLDRNPWEHPPEAIVAGGLQAVRGYYDAIFMGGTTAVTR 59
            GTLPV+LARLLD  D L  LDL RNPWEHPPEAIVAGG+QAVRGYY+A+F GGTTAVTR
Sbjct:  389 GTLPVDLARLLDVFDGLRSLDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTR 447          
BLAST of mRNA_E-fasciculatus_F_contig15445.3814.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.050e-18
Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    1 GTLPVELARLLDKLD---SLSFLDLDRNPWEHPPEAIVAGGLQAVRGYYDAIFMGGTTAVTR 59
            GTLPV LA LLD  D   S+  LDL +NPWEHPPEAIV GG+ AVRGY++AIF GGTT VTR
Sbjct:    6 GTLPVALASLLDSFDRLHSVGGLDLSQNPWEHPPEAIVTGGMLAVRGYFEAIFRGGTTVVTR 67          
BLAST of mRNA_E-fasciculatus_F_contig15445.3814.1 vs. uniprot
Match: A0A6H5JQZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ5_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 4.270e-18
Identity = 42/62 (67.74%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    1 GTLPVELARLLDKLD---SLSFLDLDRNPWEHPPEAIVAGGLQAVRGYYDAIFMGGTTAVTR 59
            GTLPV LA LLD  D   S+  L+L +NPWEHPPEAIV GG+ AVRGY++AIF GGTT VTR
Sbjct:  172 GTLPVALASLLDSFDRLHSVGGLNLSQNPWEHPPEAIVTGGMLAVRGYFEAIFRGGTTVVTR 233          
BLAST of mRNA_E-fasciculatus_F_contig15445.3814.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 1.130e-16
Identity = 38/59 (64.41%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 GTLPVELARLLDKLDSLSFLDLDRNPWEHPPEAIVAGGLQAVRGYYDAIFMGGTTAVTR 59
            GTLPV LA LLD L+ +  L + +NPWE PP+AIV GG+ AVR Y++AI+MGGTTAVTR
Sbjct:  317 GTLPVPLACLLDSLERIYRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTR 375          
BLAST of mRNA_E-fasciculatus_F_contig15445.3814.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 6.760e-10
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 GTLPVELARLLDKLDSLSFLDLDRNPWEHPPEAIVAGGLQAVRGYYDAI 49
            GTLPV L  LLD L  +  L L  NPWE+PPEAI AGG+ AVR Y++AI
Sbjct:   31 GTLPVPLVCLLDTLARVRDLGLAHNPWEYPPEAIAAGGIPAVRRYFEAI 79          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15445.3814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FX69_ECTSI6.310e-2583.05LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KUH8_9PHAE3.860e-2479.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI5.580e-2481.36LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JRW5_9PHAE1.050e-1869.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQZ5_9PHAE4.270e-1867.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJV1_ECTSI1.130e-1664.41LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JSC0_9PHAE6.760e-1061.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15445contigE-fasciculatus_F_contig15445:2710..2886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15445.3814.1mRNA_E-fasciculatus_F_contig15445.3814.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15445 2710..2887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15445.3814.1 ID=prot_E-fasciculatus_F_contig15445.3814.1|Name=mRNA_E-fasciculatus_F_contig15445.3814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=59bp
GTLPVELARLLDKLDSLSFLDLDRNPWEHPPEAIVAGGLQAVRGYYDAIF
MGGTTAVTR
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