mRNA_E-fasciculatus_F_contig1544.3813.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1544.3813.1 vs. uniprot
Match: D8LKF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF9_ECTSI) HSP 1 Score: 846 bits (2185), Expect = 4.220e-300 Identity = 493/662 (74.47%), Postives = 508/662 (76.74%), Query Frame = 1
Query: 1 MAGTLFPSPEPETPPIDRWARGWVASRSTTARDWDRFPRGSTSDEGSEGGRSLXXXXSTATGMTSAHRHGXXXXXXXXRHRPHSSSCKDDSSGVPFPLAPEVREDQSLPPTIPGHNGRKSRKGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESESGCLWDGGTDGSDRQADDLDSRLKDLGGREWTIDGCGELLIVDKLQGDAMPKTVVSALYNFRDVQDKLAGGENGGXXXXXXXXXXXGLGGGKRHRGGSIXXXXXXXXXXXXXSSSFSKERKQSSSSLRRXXXXXXXXXXTGSRRRGSGAFFELEPTLQPNLTNSLDRPGPGVSVSDGGSLKEGPSWPQDPDHMSRSEYRERQRRQDLSGTSMLDGGEDASSLGFSLGSVKSAPALRGLGLXXXXXXXXXXGTAGGGRRAVSGGRGSG--------------GVGGRGTSITAFEDVNPFAGGIRVDISPPAAGDGR--AVAXXXXXXXXXXXXXXXXQSGRFFPGAGPESSSVGETPDDPHLALVKDPDWGRNVRGSIKEAGYLPKVKLVSRERPLTHERPHTRNPRDPRNVPARPNAHVSPKNSTSSRADRNTDPQCTDDDGGSTKSSFPALPMSLTGWGEGGGXXXLXXXXXXXXXXXXGKKGRGMITMTKPKEIIVQGLLR 1938
MAGTLFPSPEPETPPIDRWARGWVASR TT RDWDRFPRGS+SD+GSEGGRSL STATGMTSAHRHGXXXXX RHRPHSSSCK+DSSGVPFPLAPEVREDQSLPPTIPGH+ R SRKGGD ESESGCLWDGGTDGSDRQ DDLDSRLKDLGGREWTIDG GELLIVD++QGDAMPKTVVSALYNFRDV+DKLAGGENGG XXXXXXX L GGKRHR GS S+SFSKERK+SS SLRR XXXXXXX RRRGSGAFFELEPTLQPNL NSLDRPGPGVSVSDGGSLKEGPSWPQDP+HMSRSEYRERQRRQDL+G+SMLDGGEDASSLGFSLGSV+SAPALRGLGL G A GGR G GVG RGTSITAFEDVNPFAGGIRVD SPPA GDGR A A QSG FFPGAGPESSSVGET DDPHLALVKDPDWGRNVRGS KEAGYLPKVK VSRERPLTHERP+TRNPRDPRNVPARPNAHVSPKNSTSSR N DPQ T DDGGSTKSSFP+LPMSLTGWGEGGG L GKKGRGMITMTKPKEIIVQGLLR
Sbjct: 1 MAGTLFPSPEPETPPIDRWARGWVASRRTTVRDWDRFPRGSSSDDGSEGGRSLRSVRSTATGMTSAHRHGXXXXXHA-RHRPHSSSCKEDSSGVPFPLAPEVREDQSLPPTIPGHSVRMSRKGGDSRAKRGRGGHCAKRTGANRGEGGRRQGSGGESESGCLWDGGTDGSDRQEDDLDSRLKDLGGREWTIDGAGELLIVDRVQGDAMPKTVVSALYNFRDVRDKLAGGENGGGGVXXXXXXX--LDGGKRHRDGS---GVGKTRGSISGSASFSKERKRSSLSLRRASRXXXXXXXXXXRRRGSGAFFELEPTLQPNLANSLDRPGPGVSVSDGGSLKEGPSWPQDPEHMSRSEYRERQRRQDLTGSSMLDGGEDASSLGFSLGSVQSAPALRGLGLGLN------------GNAAAGGGRDGGXXXXXXXXXXXXXXGVG-RGTSITAFEDVNPFAGGIRVDTSPPAGGDGRGAAGASGTRGDLSPLTASVGGQSGSFFPGAGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPYTRNPRDPRNVPARPNAHVSPKNSTSSRVGCNADPQYTGDDGGSTKSSFPSLPMSLTGWGEGGGGGSLGKGGGVPGRPMRGKKGRGMITMTKPKEIIVQGLLR 643 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1544.3813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1544.3813.1 >prot_E-fasciculatus_F_contig1544.3813.1 ID=prot_E-fasciculatus_F_contig1544.3813.1|Name=mRNA_E-fasciculatus_F_contig1544.3813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=647bp MAGTLFPSPEPETPPIDRWARGWVASRSTTARDWDRFPRGSTSDEGSEGGback to top mRNA from alignment at E-fasciculatus_F_contig1544:8690..14490+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1544.3813.1 ID=mRNA_E-fasciculatus_F_contig1544.3813.1|Name=mRNA_E-fasciculatus_F_contig1544.3813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5801bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1544:8690..14490+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1544:8690..14490+ >mRNA_E-fasciculatus_F_contig1544.3813.1 ID=mRNA_E-fasciculatus_F_contig1544.3813.1|Name=mRNA_E-fasciculatus_F_contig1544.3813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3882bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1544:8690..14490+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |