prot_E-fasciculatus_F_contig15433.3810.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15433.3810.1
Unique Nameprot_E-fasciculatus_F_contig15433.3810.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length373
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15433.3810.1 vs. uniprot
Match: D8LCM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM0_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 5.640e-154
Identity = 280/382 (73.30%), Postives = 295/382 (77.23%), Query Frame = 0 
Query:   12 AATAPPHDGPPAPAYPGLNAQHRAPXXXXXXXXXXXXXXXX--------------------TVPAVXXXXXXXXXGGYFPGAPGVDSSAD-PGGNSSRRGKKKEKKEAITEVAHESRKWKWAMFVAGNLISVAVVASEIGELSVCFEENLDEDDDDAPEENASEAYGRLLFILVLGLLVDFVSAVLLSLVYRSPLDIKSVHKIPPGDMRHCGGTCLVHFVAPFSWGLIYLVGGVVSGSYGDNAPCGGGAGGDGMETYLTVSGALMIFFGLGMLALSFVTLMLACXXXXXXXXXXXXXXXXXXXXXXXXCCSRARDAVHKRVMSKSPLFDLAWQVQGVVLSYRAGAVSLGSALLLASSGVLGEVLAAFGSLAPEDIQELVGPI 372
            AATAPPH G  APAYPGLNAQH AP              XX                    TVPA           GYFP APG DSS+D P G  SRRG K   +EA TEVA ESRKWKWAMFV GNLIS+AVVASEIGEL+VCFEENLDEDDDD PEENAS AYG L+F LVLGLLVDF+SAVLLSLVYRSPLDIKS HKIPPGDMRHCGGTCLVHFVAPFSWGL+Y  GG VS  YGDNAPCGGG GGDG+E+YLT+SGALM  FG GMLALSFVTLM ACXXXXXXXXXXXXXXXXXXX     CCS+ARDAVHKR MSKSP+FDLAWQVQ V+LSYRAGAVSL SA LL SSGV+GEVLAAFGSLAPE+IQELVGPI
Sbjct:   86 AATAPPHGG--APAYPGLNAQHGAPRPPAYQAATTTVLGXXXXXXXXXXXXXXXXXXXXXTTVPAYPGINVQHR--GYFPAAPGADSSSDDPSG--SRRGTKXXXEEAATEVARESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDEDDDDTPEENASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKSTHKIPPGDMRHCGGTCLVHFVAPFSWGLVYWAGGYVSIMYGDNAPCGGGTGGDGLESYLTISGALMAVFGTGMLALSFVTLMFACXXXXXXXXXXXXXXXXXXXG----CCSKARDAVHKRFMSKSPIFDLAWQVQSVLLSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPI 457
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BLAST of mRNA_E-fasciculatus_F_contig15433.3810.1 vs. uniprot
Match: A0A6H5JS15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS15_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 1.510e-147
Identity = 253/350 (72.29%), Postives = 272/350 (77.71%), Query Frame = 0 
Query:   24 PAYPGLNAQHRAPXXXXXXXXXXXXXXXXTVPAVXXXXXXXXXGGYFPGAPGVDSSAD-PGGNSSRRGKKKEKKEAITEVAHESRKWKWAMFVAGNLISVAVVASEIGELSVCFEENLDEDDDDAPEENASEAYGRLLFILVLGLLVDFVSAVLLSLVYRSPLDIKSVHKIPPGDMRHCGGTCLVHFVAPFSWGLIYLVGGVVSGSYGDNAPCGGGAGGDGMETYLTVSGALMIFFGLGMLALSFVTLMLACXXXXXXXXXXXXXXXXXXXXXXXXCCSRARDAVHKRVMSKSPLFDLAWQVQGVVLSYRAGAVSLGSALLLASSGVLGEVLAAFGSLAPEDIQELVGPI 372
            PAYPGLN QHR                                 GYFP APG DSS+D P G  SRRG KK++KEA+TEVAHESR WKWAMFV GNLIS+AVVASEIGELSVCFEEN +EDDDD  EENAS A+G L+  LVL LLVDF+SAVLLSLVYRSPLDIKS HKIPPGDMRHCGGT LVHFVAPF WGL+Y  GG+ S  YGDNAPCGGG GGDGME+YL +SG LMI FG GMLALSFV LMLACXXXXXXXXXXXXXXX         CCSRARDAVHKR+MSKSP+FDLAWQVQ V+LSYRAGAV+L SA LL SSGV+GEVLAAFGSLAPE+IQELVGPI
Sbjct:   23 PAYPGLNVQHR---------------------------------GYFPAAPGADSSSDDPSG--SRRGMKKKEKEAVTEVAHESRSWKWAMFVLGNLISLAVVASEIGELSVCFEENPEEDDDDTLEENASSAFGALMLNLVLSLLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGTFLVHFVAPFFWGLVYFTGGIASSMYGDNAPCGGGNGGDGMESYLKISGILMIVFGTGMLALSFVALMLACXXXXXXXXXXXXXXXG--------CCSRARDAVHKRLMSKSPIFDLAWQVQSVLLSYRAGAVNLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPI 329
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15433.3810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCM0_ECTSI5.640e-15473.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS15_9PHAE1.510e-14772.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 253..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 276..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 223..252
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
NoneNo IPR availableTMHMMTMhelixcoord: 248..270
NoneNo IPR availableTMHMMTMhelixcoord: 206..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15433contigE-fasciculatus_F_contig15433:1900..3018 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15433.3810.1mRNA_E-fasciculatus_F_contig15433.3810.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15433 1900..3018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15433.3810.1 ID=prot_E-fasciculatus_F_contig15433.3810.1|Name=mRNA_E-fasciculatus_F_contig15433.3810.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=373bp
RPPPPAYPATQAATAPPHDGPPAPAYPGLNAQHRAPPPPPPPPVYQAATT
TTTVPAVAYPGLNVQHGGYFPGAPGVDSSADPGGNSSRRGKKKEKKEAIT
EVAHESRKWKWAMFVAGNLISVAVVASEIGELSVCFEENLDEDDDDAPEE
NASEAYGRLLFILVLGLLVDFVSAVLLSLVYRSPLDIKSVHKIPPGDMRH
CGGTCLVHFVAPFSWGLIYLVGGVVSGSYGDNAPCGGGAGGDGMETYLTV
SGALMIFFGLGMLALSFVTLMLACCSSKSSSSSSSQQPPPAAPPRQGGCC
SRARDAVHKRVMSKSPLFDLAWQVQGVVLSYRAGAVSLGSALLLASSGVL
GEVLAAFGSLAPEDIQELVGPI*
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