prot_E-fasciculatus_F_contig15372.3771.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15372.3771.1
Unique Nameprot_E-fasciculatus_F_contig15372.3771.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length180
Homology
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 3.930e-113
Identity = 177/180 (98.33%), Postives = 179/180 (99.44%), Query Frame = 0
Query:    1 VSGIADGDVAAAVAEEAXXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWS 180
            ++GIADGDVAAAVAEEA XXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWS
Sbjct:   82 LTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWS 261          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.100e-67
Identity = 114/178 (64.04%), Postives = 133/178 (74.72%), Query Frame = 0
Query:    2 SGIADGDVAAAVAEEAXXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 179
            SG+AD    AA A+ A             L   TE AIT LHD L   GV  +YG +II FTLF+KG+TFPLTYQQL+STTKMQTL PKVK++Q R ANNPEAAN+A+  LY+ E VNPL+GCLP+LAQIPIFISLYR+LLNLAKENKL E FLW+PSLEGP F +PPTE ++WIK W
Sbjct:   74 SGLAD--ATAATADAAADAAANNGGVFAGLVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTW 249          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7R9UFB5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.190e-56
Identity = 93/172 (54.07%), Postives = 124/172 (72.09%), Query Frame = 0
Query:    8 DVAAAVAEEAXXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 179
            DVA+ VA+        G  P+  L   T  AITGLHD+L  +G+ + YG +II FTL +K +TFPL  +QL ST KMQ + PK++E+Q ++ANNPE ANQ + QLYQ  ++NPLAGCLP+LAQIPIFI+LYRS+LNL+K+N LTE FLW+PSLEGPT+ +   + + W+  W
Sbjct:   83 DVASEVAKS-----DQGGGPLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKIREIQTKFANNPEKANQMIAQLYQQYDINPLAGCLPSLAQIPIFIALYRSILNLSKDNVLTEPFLWLPSLEGPTYGAEQKDALQWLTTW 249          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.120e-50
Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 0
Query:   33 GVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 179
            G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K W
Sbjct:  153 GAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 299          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC)

HSP 1 Score: 177 bits (448), Expect = 4.970e-50
Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 0
Query:   33 GVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 179
            G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K W
Sbjct:  115 GAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 261          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A4D9D9H4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H4_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.860e-49
Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 0
Query:   33 GVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 179
            G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P + M+W+K W
Sbjct:  215 GAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 361          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7S2H5X8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5X8_9STRA)

HSP 1 Score: 171 bits (432), Expect = 6.310e-48
Identity = 85/151 (56.29%), Postives = 109/151 (72.19%), Query Frame = 0
Query:   31 LTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDW 179
            LT   EG +  +H+ L S G+ + A+G+SII  TL +K  TFPLT  QL ST KMQ L P +KE QA+Y +NPE  NQ + ++YQT NVNPLAGC+P+L QIP+FI LYR++LNLAKEN L ESFLW+P+LEGPT+ + P     WI K+W
Sbjct:  126 LTLPIEGLLNIIHNTLVSTGMDANAWGVSIIVMTLVIKAATFPLTKSQLESTNKMQALQPVIKEAQAKYQSNPEVMNQKIAEIYQTNNVNPLAGCVPSLVQIPVFIGLYRAVLNLAKENALDESFLWLPNLEGPTYGADPASGSDWIFKNW 276          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7S4EMW1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMW1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 7.120e-48
Identity = 84/149 (56.38%), Postives = 112/149 (75.17%), Query Frame = 0
Query:   31 LTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKD 178
            LTG T   +  +H+ L S+GV S ++GISII  T+ +K +TFPLT  QL ST KMQ L P +KE+QA+Y +NPE  NQ + +LYQT NVNPLAGC+P++ QIP+FI LYR++L+LA EN L ESFLW+PSLEGPT+ + PT+  +W+ D
Sbjct:  111 LTGPTMAFLEVIHNALVSVGVNSNSWGISIIALTMTIKLLTFPLTKAQLESTQKMQALQPTLKEVQAKYQSNPEVMNQKIAELYQTNNVNPLAGCIPSIVQIPVFIGLYRAVLDLANENVLDESFLWLPSLEGPTYGADPTKGSAWLFD 259          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7S2EB53_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB53_TRICV)

HSP 1 Score: 168 bits (425), Expect = 3.720e-47
Identity = 85/173 (49.13%), Postives = 120/173 (69.36%), Query Frame = 0
Query:   10 AAAVAEEAXXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDWS 180
            A A  E A      GF     LTG  EG +  +H VL SMG+   A+G+SI+  T+F+K +T+PLT QQL ST++MQ L P++KE+Q +Y +NPE  NQ V ++YQT +VNPLAGC+P+  QIP+FI LYR++L+LAK ++L E FLW+P+LEGPT+ + P     W+ K+W+
Sbjct:   92 APAAVEAAQDNGWFGF-----LTGPIEGLLNIIHGVLVSMGMDKDAWGVSIVGMTVFIKILTYPLTKQQLESTSRMQALQPQIKEIQNKYQSNPEVMNQKVAEIYQTNDVNPLAGCIPSFIQIPVFIGLYRAILDLAKMDRLEEPFLWLPNLEGPTYGADPGSASDWLFKNWA 259          
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7S0CAS3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAS3_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.610e-47
Identity = 82/147 (55.78%), Postives = 106/147 (72.11%), Query Frame = 0
Query:   31 LTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI 176
            L G  E  I  +H+ L  +G+ S ++G SII     +KG+TFPLT  QL ST+KMQ L PK+KE+QA+YA+NPE  NQ V   Y+   VNPLAGCLP+LAQ+PIFI LYR++LNLAK+N L ESFLW+PSLEGPT+ + P   + W+
Sbjct:   94 LAGPIEETICVIHNALNGIGLSSNSWGASIIILIFLIKGLTFPLTKAQLESTSKMQVLQPKIKEIQAKYASNPEVMNQKVSSFYKDNEVNPLAGCLPSLAQLPIFIGLYRAVLNLAKQNTLDESFLWLPSLEGPTYGADPAHGLDWV 240          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUC7_ECTSI3.930e-11398.33Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A835YLS0_9STRA2.100e-6764.04Alb3-like protein, thylakoidal inner membrane inse... [more]
A0A7R9UFB5_9STRA1.190e-5654.07Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
W7U5Y4_9STRA1.120e-5056.46Membrane insertion protein, OxaA/YidC n=1 Tax=Nann... [more]
K8YSD2_NANGC4.970e-5056.46Preprotein translocase subunit YidC n=2 Tax=Nannoc... [more]
A0A4D9D9H4_9STRA3.860e-4956.46Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2H5X8_9STRA6.310e-4856.29Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4EMW1_9STRA7.120e-4856.38Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2EB53_TRICV3.720e-4749.13Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0CAS3_9STRA4.610e-4755.78Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PFAMPF0209660KD_IMPcoord: 55..164
e-value: 1.3E-36
score: 126.0
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 20..164
IPR028055Membrane insertase YidC/Oxa1, C-terminalTIGRFAMTIGR03592TIGR03592coord: 55..165
e-value: 1.2E-36
score: 124.5
NoneNo IPR availablePANTHERPTHR12428:SF14INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTICcoord: 20..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..180
NoneNo IPR availableTMHMMTMhelixcoord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15372contigE-fasciculatus_F_contig15372:368..2284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15372.3771.1mRNA_E-fasciculatus_F_contig15372.3771.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15372 368..2284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15372.3771.1 ID=prot_E-fasciculatus_F_contig15372.3771.1|Name=mRNA_E-fasciculatus_F_contig15372.3771.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=180bp
VSGIADGDVAAAVAEEAAKGGGGGFHPIQLLTGVTEGAITGLHDVLASMG
VPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYAN
NPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKL
TESFLWIPSLEGPTFDSPPTEMMSWIKDWS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028055Membr_insert_YidC/Oxa1_C
IPR001708YidC/ALB3/OXA1/COX18