mRNA_E-fasciculatus_F_contig15372.3771.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI) HSP 1 Score: 338 bits (866), Expect = 3.930e-113 Identity = 177/180 (98.33%), Postives = 179/180 (99.44%), Query Frame = 1
Query: 1 VSGIADGDVAAAVAEEAXXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWS 540
++GIADGDVAAAVAEEA XXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWS
Sbjct: 82 LTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWS 261
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.100e-67 Identity = 114/178 (64.04%), Postives = 133/178 (74.72%), Query Frame = 1
Query: 4 SGIADGDVAAAVAEEAXXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 537
SG+AD AA A+ A L TE AIT LHD L GV +YG +II FTLF+KG+TFPLTYQQL+STTKMQTL PKVK++Q R ANNPEAAN+A+ LY+ E VNPL+GCLP+LAQIPIFISLYR+LLNLAKENKL E FLW+PSLEGP F +PPTE ++WIK W
Sbjct: 74 SGLAD--ATAATADAAADAAANNGGVFAGLVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTW 249
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7R9UFB5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.190e-56 Identity = 93/172 (54.07%), Postives = 124/172 (72.09%), Query Frame = 1
Query: 22 DVAAAVAEEAXXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 537
DVA+ VA+ G P+ L T AITGLHD+L +G+ + YG +II FTL +K +TFPL +QL ST KMQ + PK++E+Q ++ANNPE ANQ + QLYQ ++NPLAGCLP+LAQIPIFI+LYRS+LNL+K+N LTE FLW+PSLEGPT+ + + + W+ W
Sbjct: 83 DVASEVAKS-----DQGGGPLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKIREIQTKFANNPEKANQMIAQLYQQYDINPLAGCLPSLAQIPIFIALYRSILNLSKDNVLTEPFLWLPSLEGPTYGAEQKDALQWLTTW 249
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.120e-50 Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 97 GVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 537
G E AIT +H+ L G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P Q + QLY NVNPLAGCLPAL QIPIFISLYR+L NLA N+L E FLW+P+LEGPT+ + P + M+W+K W
Sbjct: 153 GAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 299
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC) HSP 1 Score: 177 bits (448), Expect = 4.970e-50 Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 97 GVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 537
G E AIT +H+ L G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P Q + QLY NVNPLAGCLPAL QIPIFISLYR+L NLA N+L E FLW+P+LEGPT+ + P + M+W+K W
Sbjct: 115 GAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 261
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A4D9D9H4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H4_9STRA) HSP 1 Score: 177 bits (448), Expect = 3.860e-49 Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 97 GVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDW 537
G E AIT +H+ L G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P Q + QLY NVNPLAGCLPAL QIPIFISLYR+L NLA N+L E FLW+P+LEGPT+ + P + M+W+K W
Sbjct: 215 GAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQW 361
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7S2H5X8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5X8_9STRA) HSP 1 Score: 171 bits (432), Expect = 6.310e-48 Identity = 85/151 (56.29%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 91 LTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDW 537
LT EG + +H+ L S G+ + A+G+SII TL +K TFPLT QL ST KMQ L P +KE QA+Y +NPE NQ + ++YQT NVNPLAGC+P+L QIP+FI LYR++LNLAKEN L ESFLW+P+LEGPT+ + P WI K+W
Sbjct: 126 LTLPIEGLLNIIHNTLVSTGMDANAWGVSIIVMTLVIKAATFPLTKSQLESTNKMQALQPVIKEAQAKYQSNPEVMNQKIAEIYQTNNVNPLAGCVPSLVQIPVFIGLYRAVLNLAKENALDESFLWLPNLEGPTYGADPASGSDWIFKNW 276
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7S4EMW1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMW1_9STRA) HSP 1 Score: 170 bits (431), Expect = 7.120e-48 Identity = 84/149 (56.38%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 91 LTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKD 534
LTG T + +H+ L S+GV S ++GISII T+ +K +TFPLT QL ST KMQ L P +KE+QA+Y +NPE NQ + +LYQT NVNPLAGC+P++ QIP+FI LYR++L+LA EN L ESFLW+PSLEGPT+ + PT+ +W+ D
Sbjct: 111 LTGPTMAFLEVIHNALVSVGVNSNSWGISIIALTMTIKLLTFPLTKAQLESTQKMQALQPTLKEVQAKYQSNPEVMNQKIAELYQTNNVNPLAGCIPSIVQIPVFIGLYRAVLDLANENVLDESFLWLPSLEGPTYGADPTKGSAWLFD 259
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7S2EB53_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB53_TRICV) HSP 1 Score: 168 bits (425), Expect = 3.720e-47 Identity = 85/173 (49.13%), Postives = 120/173 (69.36%), Query Frame = 1
Query: 28 AAAVAEEAXXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDWS 540
A A E A GF LTG EG + +H VL SMG+ A+G+SI+ T+F+K +T+PLT QQL ST++MQ L P++KE+Q +Y +NPE NQ V ++YQT +VNPLAGC+P+ QIP+FI LYR++L+LAK ++L E FLW+P+LEGPT+ + P W+ K+W+
Sbjct: 92 APAAVEAAQDNGWFGF-----LTGPIEGLLNIIHGVLVSMGMDKDAWGVSIVGMTVFIKILTYPLTKQQLESTSRMQALQPQIKEIQNKYQSNPEVMNQKVAEIYQTNDVNPLAGCIPSFIQIPVFIGLYRAILDLAKMDRLEEPFLWLPNLEGPTYGADPGSASDWLFKNWA 259
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Match: A0A7S0CAS3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAS3_9STRA) HSP 1 Score: 167 bits (424), Expect = 4.610e-47 Identity = 82/147 (55.78%), Postives = 106/147 (72.11%), Query Frame = 1
Query: 91 LTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI 528
L G E I +H+ L +G+ S ++G SII +KG+TFPLT QL ST+KMQ L PK+KE+QA+YA+NPE NQ V Y+ VNPLAGCLP+LAQ+PIFI LYR++LNLAK+N L ESFLW+PSLEGPT+ + P + W+
Sbjct: 94 LAGPIEETICVIHNALNGIGLSSNSWGASIIILIFLIKGLTFPLTKAQLESTSKMQVLQPKIKEIQAKYASNPEVMNQKVSSFYKDNEVNPLAGCLPSLAQLPIFIGLYRAVLNLAKQNTLDESFLWLPSLEGPTYGADPAHGLDWV 240 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15372.3771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15372.3771.1 >prot_E-fasciculatus_F_contig15372.3771.1 ID=prot_E-fasciculatus_F_contig15372.3771.1|Name=mRNA_E-fasciculatus_F_contig15372.3771.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=180bp VSGIADGDVAAAVAEEAAKGGGGGFHPIQLLTGVTEGAITGLHDVLASMGback to top mRNA from alignment at E-fasciculatus_F_contig15372:368..2284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15372.3771.1 ID=mRNA_E-fasciculatus_F_contig15372.3771.1|Name=mRNA_E-fasciculatus_F_contig15372.3771.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1917bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15372:368..2284- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15372:368..2284- >mRNA_E-fasciculatus_F_contig15372.3771.1 ID=mRNA_E-fasciculatus_F_contig15372.3771.1|Name=mRNA_E-fasciculatus_F_contig15372.3771.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1080bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15372:368..2284- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |