prot_E-fasciculatus_F_contig15360.3765.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15360.3765.1
Unique Nameprot_E-fasciculatus_F_contig15360.3765.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length69
Homology
BLAST of mRNA_E-fasciculatus_F_contig15360.3765.1 vs. uniprot
Match: A0A6H5KRS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS3_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 3.090e-40
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 MEEFLGFVETMEEVAEASDGAFATLNCGSDFLREDSAERFSNVAAVMENMPIEEGNYLRVPKVGEDEG 68
            MEEFLGFVETMEEVAEASDGAFATLNCGSDFLREDSAERFSNVAAVMENMPIEEGNYLRVPKVGEDEG
Sbjct:    1 MEEFLGFVETMEEVAEASDGAFATLNCGSDFLREDSAERFSNVAAVMENMPIEEGNYLRVPKVGEDEG 68          
BLAST of mRNA_E-fasciculatus_F_contig15360.3765.1 vs. uniprot
Match: D7FKR2_ECTSI (Glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR2_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 8.580e-38
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 MEEFLGFVETMEEVAEASDGAFATLNCGSDFLREDSAERFSNVAAVMENMPIEEGNYLRVPKVGEDEG 68
            MEEFLGFVETM+EVAEASDGAFATLNCGSDFLREDSA+RFSNVAA+MENMPIEEGNYLRVPKVGEDEG
Sbjct:   96 MEEFLGFVETMKEVAEASDGAFATLNCGSDFLREDSADRFSNVAAIMENMPIEEGNYLRVPKVGEDEG 163          
BLAST of mRNA_E-fasciculatus_F_contig15360.3765.1 vs. uniprot
Match: A0A836CJS8_9STRA (C subunit of glutamyl-tRNA and/or aspartyl-tRNA amidotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 3.490e-8
Identity = 33/70 (47.14%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    4 FLGFVETMEEVAEASDGAFATLNCGSD------FLREDSAERFSNVAAVMENMPIEEGNYLRVPKVGEDE 67
            FLGFV  M+E A A+DG    +    +      FLR D A +F N  A+  NMP+ EG YLRVPKVG +E
Sbjct:   84 FLGFVAAMDE-AGAADGDAPPMGDSREGLGEGGFLRSDGAVKFENADAIAANMPLREGEYLRVPKVGAEE 152          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15360.3765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KRS3_9PHAE3.090e-40100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKR2_ECTSI8.580e-3895.59Glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amido... [more]
A0A836CJS8_9STRA3.490e-847.14C subunit of glutamyl-tRNA and/or aspartyl-tRNA am... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003837Glu-tRNAGln amidotransferase C subunitPFAMPF02686Glu-tRNAGlncoord: 1..60
e-value: 1.6E-5
score: 25.1
IPR036113Glu-tRNAGln amidotransferase superfamily, subunit CSUPERFAMILY141000Glu-tRNAGln amidotransferase C subunitcoord: 2..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15360contigE-fasciculatus_F_contig15360:270..476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15360.3765.1mRNA_E-fasciculatus_F_contig15360.3765.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15360 246..1182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15360.3765.1 ID=prot_E-fasciculatus_F_contig15360.3765.1|Name=mRNA_E-fasciculatus_F_contig15360.3765.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=69bp
MEEFLGFVETMEEVAEASDGAFATLNCGSDFLREDSAERFSNVAAVMENM
PIEEGNYLRVPKVGEDEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036113Asp/Glu-ADT_sf_sub_c
IPR003837Asp/Glu-ADT_csu