prot_E-fasciculatus_F_contig15331.3747.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15331.3747.1
Unique Nameprot_E-fasciculatus_F_contig15331.3747.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length410
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15331.3747.1 vs. uniprot
Match: D8LHE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE1_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 4.210e-69
Identity = 129/140 (92.14%), Postives = 135/140 (96.43%), Query Frame = 0 
Query:  271 GVENDEERAFREAGVNRVVEGLRAENTRLRQRLRSAERAAESGDDRANVEAERADALEAELSRVRVTVKGRVGALKAALEEAEEDADRAVAEKEGFMVQWEEDVDALRSQLGAERQAREDDRRDLESVIFDLEDEVDDLK 410
            G ENDEERAFREAGVNRVV+GLRAENTRLRQRLRSAERA+ESG+DRANVEAERADALEAEL RVR TVKGRV ALKAALEEAEEDADRAVAEKEGFMVQWEEDVDALR+QLGAER+ARE+DRRDLESVIFDLEDEVD LK
Sbjct:   22 GNENDEERAFREAGVNRVVQGLRAENTRLRQRLRSAERASESGEDRANVEAERADALEAELGRVRATVKGRVRALKAALEEAEEDADRAVAEKEGFMVQWEEDVDALRNQLGAERKAREEDRRDLESVIFDLEDEVDGLK 161
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15331.3747.1 vs. uniprot
Match: A0A6H5KCM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM1_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 5.430e-45
Identity = 102/139 (73.38%), Postives = 113/139 (81.29%), Query Frame = 0 
Query:  272 VENDEERAFREAGVNRVVEGLRAENTRLRQRLRSAERAAESGDDRANVEAERADALEAELSRVRVTVKGRVGALKAALEEAEEDADRAVAEKEGFMVQWEEDVDALRSQLGAERQAREDDRRDLESVIFDLEDEVDDLK 410
            V+NDEERAFREAGV+RVVEGLRAENTR+R+RLRSAERAAESG+DRA VEAERADALE EL R                       DRAVAEKEGFM+QWE+DVDALR+QLGAER+AR++DRRDLESVIFDLEDEVDDLK
Sbjct:  483 VKNDEERAFREAGVHRVVEGLRAENTRVRERLRSAERAAESGEDRAKVEAERADALEEELGRXXXXXXXXXXXXXXXXXXXXXXXDRAVAEKEGFMIQWEQDVDALRNQLGAERKARQEDRRDLESVIFDLEDEVDDLK 621
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15331.3747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHE1_ECTSI4.210e-6992.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCM1_9PHAE5.430e-4573.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119
NoneNo IPR availableCOILSCoilCoilcoord: 342..369
NoneNo IPR availableCOILSCoilCoilcoord: 289..309
NoneNo IPR availableCOILSCoilCoilcoord: 392..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15331contigE-fasciculatus_F_contig15331:456..3045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15331.3747.1mRNA_E-fasciculatus_F_contig15331.3747.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15331 456..3045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15331.3747.1 ID=prot_E-fasciculatus_F_contig15331.3747.1|Name=mRNA_E-fasciculatus_F_contig15331.3747.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=410bp
LTPQVVKTRARETDLRRANAALLESTTASSALEAPPSSSSSSSELEANAA
KQNAAERATTASLPGSATTGYSSQQQQQQQQQQDGDEEKNSGGDAAGVVE
SLRRDNAALRRELEALSAAAGGGGGRDASPVSPPPFGGSVETRGFGWGVP
GRDGGGGGGRRGGSFLPWLLASAGGGGVVAPARPGVAADAVVVDAVVNGG
SGGGSVTPDGGDGAVEADGAGEAEADDSSSSSSSGSSSEIGGASSSQSSK
QTITPPPPAAAAAAAAAATTGVENDEERAFREAGVNRVVEGLRAENTRLR
QRLRSAERAAESGDDRANVEAERADALEAELSRVRVTVKGRVGALKAALE
EAEEDADRAVAEKEGFMVQWEEDVDALRSQLGAERQAREDDRRDLESVIF
DLEDEVDDLK
back to top