prot_E-fasciculatus_F_contig15296.3734.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15296.3734.1
Unique Nameprot_E-fasciculatus_F_contig15296.3734.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length181
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15296.3734.1 vs. uniprot
Match: A0A6H5L076_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L076_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 6.500e-50
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0 
Query:   28 EGELMDFAFAPGLMQEGDNTASVKGAVTKKLEELMEEPCDEVFPEYITVMVSNGKTIREICSQLEDLLTAGTATQFCRWLGAHLRELEAKNKXXXXXXXXXXXXXXXXXXXGGKPAKQEASGG 150
            EGELMDF+F PGLMQEGDNTASVKGAVTKKLEELMEEPCDEVFPEYITVMVSNGKTIREICSQLEDLLTAGTAT+FC WLGA+LRELEAKN XXXXXXXXXXXXXXXXXXX  KP+KQ+ASGG
Sbjct:   29 EGELMDFSFPPGLMQEGDNTASVKGAVTKKLEELMEEPCDEVFPEYITVMVSNGKTIREICSQLEDLLTAGTATKFCIWLGAYLRELEAKNXXXXXXXXXXXXXXXXXXXXXKKPSKQQASGG 151
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BLAST of mRNA_E-fasciculatus_F_contig15296.3734.1 vs. uniprot
Match: D7G5I3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I3_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 2.090e-49
Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 0 
Query:   28 EGELMDFAFAPGLMQEGDNTASVKGAVTKKLEELMEEPCDEVFPEYITVMVSNGKTIREICSQLEDLLTAGTATQFCRWLGAHLRELEAKNK 119
            EGELMDF+F  GLMQEGDNTASVKGAVTKKLEELMEEPCDEVFPEYITVMVSNGKTIREICSQLEDLLTAGTAT+FCRWLGAHLRELE KNK
Sbjct:   27 EGELMDFSFPLGLMQEGDNTASVKGAVTKKLEELMEEPCDEVFPEYITVMVSNGKTIREICSQLEDLLTAGTATEFCRWLGAHLRELEGKNK 118
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15296.3734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L076_9PHAE6.500e-5091.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5I3_ECTSI2.090e-4994.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.40coord: 41..133
e-value: 5.6E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR14738:SF29ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14coord: 51..161
IPR040366Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14PANTHERPTHR14738FAMILY NOT NAMEDcoord: 51..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15296contigE-fasciculatus_F_contig15296:300..2634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15296.3734.1mRNA_E-fasciculatus_F_contig15296.3734.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15296 300..2634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15296.3734.1 ID=prot_E-fasciculatus_F_contig15296.3734.1|Name=mRNA_E-fasciculatus_F_contig15296.3734.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=181bp
MVSEAAGEGSGSAGQQKAAAAAAAEGGEGELMDFAFAPGLMQEGDNTASV
KGAVTKKLEELMEEPCDEVFPEYITVMVSNGKTIREICSQLEDLLTAGTA
TQFCRWLGAHLRELEAKNKNAAAAAAPKATTASKGEGEGGKPAKQEASGG
GKTSSSSRGGAGKASGSGDDGKASGKGAGSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040366Nab2/ZC3H14