mRNA_E-fasciculatus_F_contig15291.3730.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: A0A6U1QGM8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QGM8_9STRA) HSP 1 Score: 150 bits (379), Expect = 3.740e-42 Identity = 67/108 (62.04%), Postives = 94/108 (87.04%), Query Frame = 1
Query: 88 MMTALLVFKTLSMLFESIRYHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEETAPGSMVWLKWRNVLH 411
MM+ LL+FK +++LFESIR HY+ +TG AE WS+VY++FAF+KG+ LFVV+LLIG+GWSL+KP+L+ R+KRIIV VL+LQV++N+A ++LEET PG+ WL WR++LH
Sbjct: 66 MMSVLLIFKCMTLLFESIRLHYIKVTGHAETWSVVYFIFAFVKGVMLFVVILLIGTGWSLVKPYLNDREKRIIVVVLTLQVIDNIAMVILEETTPGTQRWLNWRDILH 173
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: A0A7S3UTH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTH5_HETAK) HSP 1 Score: 149 bits (377), Expect = 8.780e-41 Identity = 76/127 (59.84%), Postives = 97/127 (76.38%), Query Frame = 1
Query: 37 VCWVQLYHKK--KVYHIHHMMTALLVFKTLSMLFESIRYHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEETAPGSMVWLKWRNVLH 411
+ WV K ++ IHH MTALLVFK LS+LFES+RYH++ LTG E WS+VY++FAF+KGI LFVV+LLIG+GWS++KPFL+ +KRII VL LQV+ NVA +VL E+APGS + WR VLH
Sbjct: 149 ITWVVYLRKNAGQIQKIHHTMTALLVFKVLSVLFESLRYHHMRLTGTTELWSVVYFVFAFVKGILLFVVILLIGTGWSMVKPFLNKMEKRIIFVVLCLQVVANVAMVVLGESAPGSESYSTWRGVLH 275
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: F0XVW2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVW2_AURAN) HSP 1 Score: 143 bits (361), Expect = 1.110e-39 Identity = 66/115 (57.39%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 67 KVYHIHHMMTALLVFKTLSMLFESIRYHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEETAPGSMVWLKWRNVLH 411
+V+ IH +M ALLV K+L+M+ +++RYH++ +TG+ E W +VYY+FA KG+ LFVV+LLIG+GWSL+KP+L+ R+K+I++ VL LQV++NVA +V EETAPGS WL WR+VLH
Sbjct: 33 RVHGIHKLMGALLVLKSLTMMSQAMRYHFINVTGSGEGWEVVYYVFASAKGVMLFVVILLIGTGWSLVKPYLNDREKKIVLVVLVLQVVDNVALVVFEETAPGSQRWLTWRDVLH 147
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: K8Z909_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z909_NANGC) HSP 1 Score: 144 bits (362), Expect = 4.050e-38 Identity = 73/137 (53.28%), Postives = 104/137 (75.91%), Query Frame = 1
Query: 25 LIRCVCWVQLYHKKK--VYHIHHMMTALLVFKTLSMLFESIR---YHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEE---TAPGSMVWLKWRNVLH 411
L+ WV + ++K V+ IH+MM ALLVFKTLS+LFE++R Y GLTG A+ W++VYY+FAF+KGI FVV+LLIG+GWSL+KP+L R+K++++ VL+LQV++N A +VL+E T+PGS WL WR++ H
Sbjct: 188 LVAMAAWVAVCRRRKEHVHRIHNMMLALLVFKTLSLLFEAVRFQAYQKHGLTGHADGWAVVYYVFAFVKGIMRFVVILLIGTGWSLLKPYLSDREKKVVLVVLALQVIDNTAMVVLDELSQTSPGSASWLTWRDIFH 324
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: W7TWZ9_9STRA (Transmembrane receptor, eukaryota n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWZ9_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.190e-38 Identity = 73/137 (53.28%), Postives = 104/137 (75.91%), Query Frame = 1
Query: 25 LIRCVCWVQLYHKKK--VYHIHHMMTALLVFKTLSMLFESIR---YHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEE---TAPGSMVWLKWRNVLH 411
L+ WV + ++K V+ IH+MM ALLVFKTLS+LFE++R Y GLTG A+ W++VYY+FAF+KGI FVV+LLIG+GWSL+KP+L R+K++++ VL+LQV++N A +VL+E T+PGS WL WR++ H
Sbjct: 207 LVAMAAWVAVCRRRKEHVHRIHNMMLALLVFKTLSLLFEAVRFQAYQKHGLTGHADGWAVVYYVFAFVKGIMRFVVILLIGTGWSLLKPYLSDREKKVVLVVLALQVIDNTAMVVLDELSQTSPGSASWLTWRDIFH 343
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: A0A7S1TRC1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRC1_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.180e-35 Identity = 63/116 (54.31%), Postives = 94/116 (81.03%), Query Frame = 1
Query: 64 KKVYHIHHMMTALLVFKTLSMLFESIRYHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEETAPGSMVWLKWRNVLH 411
+ V HIH +M L++FK +++LF+ +RY +G TG A+ W++V+Y+F L+ I+LFVV+LLIG GWSL+KP L+ R+K+II FVL+LQVL+N+A +V++ETAPGS +L+WR+VLH
Sbjct: 274 RTVVHIHKLMAVLVMFKVMTLLFDGVRYQVIGHTGHADGWTVVFYIFTVLRSISLFVVILLIGMGWSLLKPSLNEREKKIIFFVLTLQVLDNIAFLVVDETAPGSQSYLQWRDVLH 389
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: A0A8J9WZB5_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WZB5_PHATR) HSP 1 Score: 124 bits (311), Expect = 3.440e-33 Identity = 60/115 (52.17%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 67 KVYHIHHMMTALLVFKTLSMLFESIRYHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEETAPGSMVWLKWRNVLH 411
KVY IH++M LL+FKTL++L ES+RYH + TG AE WS+ Y +F F+KG+ LF V+LLIGSGWS +KP L ++K+++ F+L+LQV+N +A IVL + G + KW VLH
Sbjct: 50 KVYAIHYLMAVLLLFKTLAVLCESLRYHKIRRTGHAEVWSVFYSIFGFIKGVFLFTVILLIGSGWSFVKPCLTNKEKKMVAFLLTLQVVNQIALIVLSQRTEGENAFEKWTAVLH 164
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: A0A5D6XNA0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNA0_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.430e-33 Identity = 63/115 (54.78%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 70 VYHIHHMMTALLVFKTLSMLFESIRYHYLGLTG-AAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEETAPGSMVWLKWRNVLH 411
++ +HH+MT L+VFKT+S+ ES+R++Y+ G W+ VYY+F FLKG+TLF V+LLIGSGWSL+KP L RDK ++ VL+LQVL+N A I LEETA G+ W+ WR++LH
Sbjct: 210 IHSVHHLMTVLVVFKTVSLFAESMRFYYMKTHGDTLTGWTEVYYVFVFLKGVTLFAVLLLIGSGWSLLKPHLSRRDKSVVSVVLALQVLSNTAMIALEETAVGTRSWVTWRDLLH 324
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: A0A2G9GVZ4_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GVZ4_9LAMI) HSP 1 Score: 124 bits (311), Expect = 3.790e-32 Identity = 55/131 (41.98%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 19 LALIRCVCWVQLYHKKK--VYHIHHMMTALLVFKTLSMLFESIRYHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEETAPGSMVWLKWRNV 405
+ + V W+ + +KK+ V+ IH M A+++ KTL++L E+ Y+ TG+A W +++Y+F+FLKGITLF +++LIG+GWS +KP+L ++K++++ V+ LQV+ N+AQ+V++ETAP W+ WR V
Sbjct: 38 IYFVLAVIWINVLYKKRLTVFRIHFFMLAVVILKTLNLLCEAEDKSYIKRTGSAHGWDVLFYIFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETAPFGQEWITWRQV 168
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Match: A0A1E7FWU6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWU6_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.360e-32 Identity = 62/114 (54.39%), Postives = 82/114 (71.93%), Query Frame = 1
Query: 70 VYHIHHMMTALLVFKTLSMLFESIRYHYLGLTGAAEAWSIVYYLFAFLKGITLFVVVLLIGSGWSLIKPFLHARDKRIIVFVLSLQVLNNVAQIVLEETAPGSMVWLKWRNVLH 411
+Y IH+MM LL KT S+ FESIRYHYL +TG +S +YY F+FLKGITLF V+++IGSGWS +KPFL R+K++I+ VL LQVLNN+A +VL + G + W +LH
Sbjct: 44 IYPIHYMMGFLLTLKTCSLFFESIRYHYLRVTGHTMFFSAIYYTFSFLKGITLFTVIVMIGSGWSFVKPFLSQREKKMILGVLVLQVLNNIAIVVLTQETEGETSFDTWTAILH 157 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15291.3730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15291.3730.1 >prot_E-fasciculatus_F_contig15291.3730.1 ID=prot_E-fasciculatus_F_contig15291.3730.1|Name=mRNA_E-fasciculatus_F_contig15291.3730.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp FQPTHSLALIRCVCWVQLYHKKKVYHIHHMMTALLVFKTLSMLFESIRYHback to top mRNA from alignment at E-fasciculatus_F_contig15291:320..1648+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15291.3730.1 ID=mRNA_E-fasciculatus_F_contig15291.3730.1|Name=mRNA_E-fasciculatus_F_contig15291.3730.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1329bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15291:320..1648+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15291:320..1648+ >mRNA_E-fasciculatus_F_contig15291.3730.1 ID=mRNA_E-fasciculatus_F_contig15291.3730.1|Name=mRNA_E-fasciculatus_F_contig15291.3730.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15291:320..1648+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |