prot_E-fasciculatus_F_contig15290.3729.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15290.3729.1
Unique Nameprot_E-fasciculatus_F_contig15290.3729.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length256
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15290.3729.1 vs. uniprot
Match: A0A6H5L123_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L123_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 5.630e-96
Identity = 215/262 (82.06%), Postives = 219/262 (83.59%), Query Frame = 0 
Query:    1 YIPEDDTDASLLAQVADATTESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GAAASPVRSEDGNFVDGVGARLGVGGGRGGASAGAKRRINLSDHHGVAAEFTARDPEGGXXXXXXXXXXXIDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEASNRRTSHLRTAKALATLWLALLAGGAVAKSDDGFMGYIARGAAGVFGGFLCTAASALFLLYWFSAKEEVQGLKEVFQT 255
            +IP+DDTDASLLAQVAD  TESR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           AAASPVRSEDGNFVDGVGA L           GAKRRINLSDHHGV AEFTARDPEG            +DGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEA NRRTSHLRTAKALATLWLALLAGGA+AKSD G MGYIARGAAGVFGG LCTAASALFLLYWFSAKEEVQGLKEVFQT
Sbjct:  332 HIPQDDTDASLLAQVADTRTESRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDSQPRGGVRAAAASPVRSEDGNFVDGVGAGLXXXXXXXXXXDGAKRRINLSDHHGVGAEFTARDPEGDDDDNHSSLDDDVDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEALNRRTSHLRTAKALATLWLALLAGGAMAKSD-GSMGYIARGAAGVFGGVLCTAASALFLLYWFSAKEEVQGLKEVFQT 592
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BLAST of mRNA_E-fasciculatus_F_contig15290.3729.1 vs. uniprot
Match: D8LH10_ECTSI (Similar to neutral Sphingomyelinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH10_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.100e-75
Identity = 131/147 (89.12%), Postives = 132/147 (89.80%), Query Frame = 0 
Query:  109 HHGVAAEFTARDPEGGXXXXXXXXXXXIDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEASNRRTSHLRTAKALATLWLALLAGGAVAKSDDGFMGYIARGAAGVFGGFLCTAASALFLLYWFSAKEEVQGLKEVFQT 255
            H  VAAEFTARDPEGG  XX       IDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEASNRRT HLRTAKALATLWLALLAGGAVAKSD G MGYIARGAAGVFGG LCTAASALFLLYWFSAK+EVQGLKEVFQT
Sbjct:  336 HRAVAAEFTARDPEGGDDXXHSSLDDDIDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEASNRRTCHLRTAKALATLWLALLAGGAVAKSD-GLMGYIARGAAGVFGGVLCTAASALFLLYWFSAKQEVQGLKEVFQT 481
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15290.3729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L123_9PHAE5.630e-9682.06Endo/exonuclease/phosphatase domain-containing pro... [more]
D8LH10_ECTSI3.100e-7589.12Similar to neutral Sphingomyelinase, putative n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 206..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..255
NoneNo IPR availableTMHMMTMhelixcoord: 188..205
NoneNo IPR availableTMHMMTMhelixcoord: 220..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15290contigE-fasciculatus_F_contig15290:602..2870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15290.3729.1mRNA_E-fasciculatus_F_contig15290.3729.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15290 602..2870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15290.3729.1 ID=prot_E-fasciculatus_F_contig15290.3729.1|Name=mRNA_E-fasciculatus_F_contig15290.3729.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=256bp
YIPEDDTDASLLAQVADATTESRNNNNNTSPGAPQRRGRGGAEAAALASP
LMGSSNSSSRDSQPPGAAASPVRSEDGNFVDGVGARLGVGGGRGGASAGA
KRRINLSDHHGVAAEFTARDPEGGDDDDDNSLDDDIDGMPPPRRGLRHSQ
SIPGGTFPQGPLLARALTEIDRGIEEASNRRTSHLRTAKALATLWLALLA
GGAVAKSDDGFMGYIARGAAGVFGGFLCTAASALFLLYWFSAKEEVQGLK
EVFQT*
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