prot_E-fasciculatus_F_contig1529.3726.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1529.3726.1
Unique Nameprot_E-fasciculatus_F_contig1529.3726.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length187
Homology
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: D7FQB6_ECTSI (Ribosomal_S17_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB6_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 7.300e-123
Identity = 172/179 (96.09%), Postives = 174/179 (97.21%), Query Frame = 0
Query:    8 GSLALTGHRFLAPPDYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
            GSLALTGHRFL PPDY+EAEQHEKAYQKQDAIFVGAKRVLGKK  K KGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLH+VSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHE CINTAVSVRKQFRMF
Sbjct:   13 GSLALTGHRFLVPPDYREAEQHEKAYQKQDAIFVGAKRVLGKKVAKSKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEPCINTAVSVRKQFRMF 191          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: A0A835Z9X9_9STRA (Ribosomal protein S17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X9_9STRA)

HSP 1 Score: 274 bits (700), Expect = 7.110e-92
Identity = 131/165 (79.39%), Postives = 148/165 (89.70%), Query Frame = 0
Query:   22 DYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
            +YKEAEQ EKAYQKQDA+F+ AKRV+GKK  KG  MRF KN+GLGFKTPK A  GTYVDKKCPFTG+VSIRGRILKGLV+SAGKM NT VIRRDYLHYV+KYRRFEKRHKN+ VH +PC+ NVKEGDI+T+GQCRPLSKT+RFN LEHE CINT++SV+KQFRMF
Sbjct:    2 EYKEAEQTEKAYQKQDAVFIAAKRVIGKKTKKG--MRFYKNIGLGFKTPKLAISGTYVDKKCPFTGNVSIRGRILKGLVLSAGKMKNTCVIRRDYLHYVTKYRRFEKRHKNLMVHLSPCFPNVKEGDILTVGQCRPLSKTIRFNALEHEPCINTSISVKKQFRMF 164          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: A0A7S2XWS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWS0_9STRA)

HSP 1 Score: 263 bits (673), Expect = 9.530e-88
Identity = 127/165 (76.97%), Postives = 146/165 (88.48%), Query Frame = 0
Query:   22 DYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
            +YKEA+QHEKAYQKQDA+F+  KRV+GKK+ KG  MRF KN+GLGFKTPK A EGTYVDKKCPFTG+VSIRGRILKGLVIS  KM NTI++RRDYLHY+SKYRRFEKRHKNM VH +PC+  +KEGD+VTIGQCRPLSKTVRFNVLEH   +N A++V+KQFRMF
Sbjct:    4 EYKEADQHEKAYQKQDAVFIAKKRVIGKKSRKG--MRFYKNIGLGFKTPKLAIEGTYVDKKCPFTGNVSIRGRILKGLVIST-KMKNTIIVRRDYLHYISKYRRFEKRHKNMAVHASPCFDTIKEGDVVTIGQCRPLSKTVRFNVLEHLPSVNQALNVKKQFRMF 165          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: A0A7R9U3I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3I9_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.180e-81
Identity = 119/170 (70.00%), Postives = 145/170 (85.29%), Query Frame = 0
Query:   17 FLAPPDYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
             +AP +Y+EAEQ EKAYQKQDA+FVG KR L +   KG  MR+VKN+GLGFKTP+ A EG YVD+KCPFTG+VSIRG+ILKG+VIS  KMT T+V+RRDYLH+V KY+R+EKRHKNMTVHC+P + NVK GD+VT+GQCRPLSKT+RFNVL HE  +N +VSV+KQFR+F
Sbjct:   20 IMAPKNYREAEQTEKAYQKQDAVFVGTKRSLVRVGKKG--MRYVKNIGLGFKTPQRAIEGNYVDRKCPFTGNVSIRGKILKGIVIS-NKMTRTVVVRRDYLHFVRKYKRYEKRHKNMTVHCSPAFTNVKPGDVVTVGQCRPLSKTIRFNVLVHEPAVNQSVSVKKQFRVF 186          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: F0XZW5_AURAN (Ribosomal_S17_N domain-containing protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0XZW5_AURAN)

HSP 1 Score: 246 bits (629), Expect = 5.110e-81
Identity = 119/164 (72.56%), Postives = 144/164 (87.80%), Query Frame = 0
Query:   23 YKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
            ++EAEQ EKAYQKQDA+F+G KR L KK+ KG  MR+V+NVGLGFKTPK A EG+YVDKKCPFTG+VSIRGRILKG+VIS  KM  T+VIRRDYL++  KYRRFEKRHKNM+VHC+PC++NVKEGDIVT+GQCRPL+KTVRFNVL HE  +N +++V+K FR+F
Sbjct:    7 FREAEQTEKAYQKQDAVFIGRKRALAKKSKKG--MRYVRNVGLGFKTPKLALEGSYVDKKCPFTGNVSIRGRILKGMVIST-KMKRTLVIRRDYLNWCGKYRRFEKRHKNMSVHCSPCFENVKEGDIVTVGQCRPLTKTVRFNVLTHEPAVNQSLNVKKVFRVF 167          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: A0A7S1XVW4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVW4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 4.710e-79
Identity = 116/169 (68.64%), Postives = 144/169 (85.21%), Query Frame = 0
Query:   18 LAPPDYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
            +AP +Y+EAEQ EKAYQKQDA+FVG KR L +   KG  +R+VK++GLGFKTP+TA  G+YVDKKCPFTG+VSIRG+ILKG+VIS  KM  TIV+RRDYLH+V KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL HE   N +V+V+KQFR+F
Sbjct:    1 MAPKNYREAEQVEKAYQKQDAVFVGTKRSLVRSGKKG--IRYVKSIGLGFKTPETAISGSYVDKKCPFTGNVSIRGKILKGVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 166          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: A0A7S0L9L5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L9L5_9EUKA)

HSP 1 Score: 241 bits (615), Expect = 6.250e-79
Identity = 119/165 (72.12%), Postives = 142/165 (86.06%), Query Frame = 0
Query:   22 DYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
            D+KEA+Q EKAYQKQDAIF+G KRVLGKK++K KGMR+ KN+GLGFKTP  A EG+YVDKKCPFTG+VSIRGRILKG+V+S  KM  T+VIRRDYL Y+SKYRRF K+H NM+VHC+P + NV EGDIVT+GQCRPL+KTVRFNV+EH    N AV+V+K FR+F
Sbjct:    2 DFKEADQTEKAYQKQDAIFIGRKRVLGKKSSK-KGMRYYKNIGLGFKTPTEAIEGSYVDKKCPFTGNVSIRGRILKGMVVS-NKMKRTVVIRRDYLKYISKYRRFCKKHTNMSVHCSPAFLNVGEGDIVTVGQCRPLAKTVRFNVIEHFPATNKAVNVKKMFRVF 164          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: A0A7S4WCA2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WCA2_9DINO)

HSP 1 Score: 239 bits (609), Expect = 5.290e-78
Identity = 117/165 (70.91%), Postives = 135/165 (81.82%), Query Frame = 0
Query:   22 DYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
            +YKEAEQ EKAYQKQD +F+  K   G K  K   MR+ KNVGLG KTPK A EGTYVDKKCPFTGDV+IRGRILKGLVIS  KMT TI++RRDYLHY+ KYRR+EKRHKN+ VHC+P +  V EGD+VTIGQCRPLSKTVRFNV+EH   +N A++V+KQFRMF
Sbjct:    4 EYKEAEQTEKAYQKQDGVFIARKNKAGAKNPKP--MRWTKNVGLGIKTPKNAVEGTYVDKKCPFTGDVAIRGRILKGLVIST-KMTRTIIVRRDYLHYIRKYRRYEKRHKNVAVHCSPAFDTVSEGDVVTIGQCRPLSKTVRFNVIEHLPTVNKAINVKKQFRMF 165          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: A0A7S2S9B4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9B4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.140e-77
Identity = 120/170 (70.59%), Postives = 142/170 (83.53%), Query Frame = 0
Query:   18 LAPPDYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEA-CINTAVSVRKQFRMF 186
            +AP +YKEAEQ EKAYQKQDAIF+G KRVL K+  +GKG RF KNVGLGFKTPK A EG +VDKKCPFTG+VSIRGR++K +VIS  KM NT+++RRDYL +V KYRRFEKRH NM  H +P ++NVKEGDIV+IGQCRPLSKTVRFNVLE EA   + AV+++K FRMF
Sbjct:    1 MAPVEYKEAEQTEKAYQKQDAIFIGKKRVLSKQ--RGKGFRFYKNVGLGFKTPKKAIEGNFVDKKCPFTGNVSIRGRVMKAMVIST-KMKNTVIVRRDYLRFVKKYRRFEKRHTNMAAHLSPAFENVKEGDIVSIGQCRPLSKTVRFNVLEVEAGASDRAVNIKKSFRMF 167          
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Match: A0A7S3PX81_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX81_9STRA)

HSP 1 Score: 226 bits (576), Expect = 5.750e-73
Identity = 114/165 (69.09%), Postives = 136/165 (82.42%), Query Frame = 0
Query:   22 DYKEAEQHEKAYQKQDAIFVGAKRVLGKKATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF 186
            +YKE +QHEK+YQ QDAIFV  KRV+G    + K MRF ++VGLG KTP  A EGTYVDKKCPFTG+V+IRGRILKGLVIS  KM NT+VIRRDYLHY++KYRRFEKRHKN++ HC P + NVKEGD+VTIG+CRPLSKTV+FNV+ HEA +N A + +K FR F
Sbjct:    7 EYKECDQHEKSYQSQDAIFVARKRVVG--GARQKPMRFTRSVGLGIKTPDAAIEGTYVDKKCPFTGNVAIRGRILKGLVIS-NKMKNTVVIRRDYLHYITKYRRFEKRHKNISAHCTPAF-NVKEGDVVTIGECRPLSKTVKFNVIAHEAAVN-AKAGKKTFRTF 166          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1529.3726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB6_ECTSI7.300e-12396.09Ribosomal_S17_N domain-containing protein n=1 Tax=... [more]
A0A835Z9X9_9STRA7.110e-9279.39Ribosomal protein S17-domain-containing protein n=... [more]
A0A7S2XWS0_9STRA9.530e-8876.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U3I9_9STRA1.180e-8170.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F0XZW5_AURAN5.110e-8172.56Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
A0A7S1XVW4_9STRA4.710e-7968.64Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0L9L5_9EUKA6.250e-7972.12Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4WCA2_9DINO5.290e-7870.91Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S2S9B4_9STRA1.140e-7770.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PX81_9STRA5.750e-7369.09Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 157..164
score: 73.25
coord: 113..136
score: 34.92
coord: 147..157
score: 63.27
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 98..168
e-value: 3.2E-26
score: 91.2
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 26..186
NoneNo IPR availableGENE3D2.40.50.1000coord: 26..186
e-value: 9.1E-70
score: 235.3
NoneNo IPR availablePANTHERPTHR10744:SF25coord: 26..186
NoneNo IPR availablePRODOMPD001295coord: 94..164
e-value: 1.0E-24
score: 278.0
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 28..96
e-value: 4.9E-33
score: 113.3
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 147..159
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 92..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1529contigE-fasciculatus_F_contig1529:5487..11759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1529.3726.1mRNA_E-fasciculatus_F_contig1529.3726.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1529 5052..11772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1529.3726.1 ID=prot_E-fasciculatus_F_contig1529.3726.1|Name=mRNA_E-fasciculatus_F_contig1529.3726.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=187bp
MAVIRGAGSLALTGHRFLAPPDYKEAEQHEKAYQKQDAIFVGAKRVLGKK
ATKGKGMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLV
ISAGKMTNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIV
TIGQCRPLSKTVRFNVLEHEACINTAVSVRKQFRMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR019979Ribosomal_S17_CS
IPR032440Ribosomal_S11_N
IPR000266Ribosomal_S17/S11