mRNA_E-fasciculatus_F_contig15275.3720.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: D7FIB7_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB7_ECTSI) HSP 1 Score: 401 bits (1030), Expect = 1.660e-136 Identity = 210/220 (95.45%), Postives = 212/220 (96.36%), Query Frame = 1
Query: 1 RKRRLSVTSTQAAPKVAVAESRRQNSMAMYTSQEIGAAPDTVPLPFPDAKVRLGPLNTIIQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAQEDGAELKAVDLSVDQNPNSPKEQ 660
RKRRLSVTSTQA PKVAVAESRRQNS+AMYTSQEIGAAPDTVPLPFPDAK P N I+QVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLA EDGAELKAVDLSVDQNPNSPKEQ
Sbjct: 103 RKRRLSVTSTQAVPKVAVAESRRQNSIAMYTSQEIGAAPDTVPLPFPDAK---RPRN-IMQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAHEDGAELKAVDLSVDQNPNSPKEQ 318
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A835Z8U8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U8_9STRA) HSP 1 Score: 236 bits (602), Expect = 2.140e-72 Identity = 129/222 (58.11%), Postives = 159/222 (71.62%), Query Frame = 1
Query: 1 RKRRLSVTSTQAAPKVAVAESRRQNSMAMYTSQEIGAAPDTVPLPFPDAKVRLGPLNTIIQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAQE--DGAELKAVDLSVDQNPNSPKEQ 660
RKRRLSVT+ + APK + RR +++ Y +QEIGA PLPF + + GTYSCHGVEPSYS ++DG+ AKINQDRGCVV+PF +PK A+F+VFDGHGEHGDV+S++ MHELQ+ L HP+L+ DP A E+++ VD +LA + G EATFSGTTAV VLMRE++LWIANAGDSRAVLAQ A A DLS+DQNPNSP EQ
Sbjct: 130 RKRRLSVTAKRGAPKQGAPDGRRVSTL--YRAQEIGAT-QVAPLPFAETLI-----------GTYSCHGVEPSYS----EEDGIAAKINQDRGCVVFPFASNPKQAVFAVFDGHGEHGDVISHYAMHELQSRLEVHPALVSDPTLAFKETFIAVDRALAKTHGAEATFSGTTAVCVLMREDHLWIANAGDSRAVLAQHRAGAAGYTAKDLSIDQNPNSPAEQ 333
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A6U1PER2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PER2_9STRA) HSP 1 Score: 170 bits (431), Expect = 7.210e-48 Identity = 104/223 (46.64%), Postives = 138/223 (61.88%), Query Frame = 1
Query: 1 RKRRLSVTSTQ---AAPKVAVAESRRQNSMAMYTSQEIGAAPDTVPLPFPDAKVRLGPLNTIIQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAQEDGAELKAVDLSVDQNPNSPKEQ 660
RKRRL++T + ++ + + +R + ++ S EIG P+ P PF + VG YSCHG+EPS+ DD+G TAKINQDRGCVVYP+NE A+F+VFDGHGE GD VS+FVM +Q L + DDP +AL E++V+ + L + K E +SGTTAV VLM EN L++AN GDSRAV+A + L A +LS D NPN P EQ
Sbjct: 34 RKRRLTLTQRKQRRSSEEXXXXKEQRGSEDRVFQSMEIGQVPEA-PAPF-----------STDLVGHYSCHGIEPSW-----DDEGFTAKINQDRGCVVYPYNEAENQAVFAVFDGHGEKGDKVSHFVMSSIQDLLDKNSHFNDDPTRALKETFVETNR-LLSEKKIECMYSGTTAVLVLMIENKLFVANCGDSRAVMATQASGGLTAKNLSNDHNPNLPTEQ 238
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A7S1UKE6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKE6_9STRA) HSP 1 Score: 172 bits (437), Expect = 5.420e-47 Identity = 100/192 (52.08%), Postives = 124/192 (64.58%), Query Frame = 1
Query: 85 MYTSQEIGAAPDTVPLPFPDAKVRLGPLNTIIQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGE-EATFSGTTAVSVLMRENNLWIANAGDSRAVLAQEDGAELKAVDLSVDQNPNSPKE 657
+Y S EIG + LPF LNT + GTYSCHGVEP + + DGV AKINQDRG +VYP+ D + ALF+VFDGHGE G +VS F M E+QA L H S L DP A+ E++V+VDE++ E E +SGTTAV VLM E +L+IAN GDSRA + + L+A DLSVDQNPN+P E
Sbjct: 283 VYKSGEIGEGKEAF-LPF---------LNTTL--GTYSCHGVEPDWYSA----DGVAAKINQDRGVIVYPYGGDNRKALFAVFDGHGERGQLVSQFCMTEIQARLEQHASFLTDPPLAMKETFVEVDEAMKDRGDEIEPVYSGTTAVMVLMHEKHLYIANVGDSRATVGRRTAGTLEAKDLSVDQNPNAPVE 458
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A4D9CWT4_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWT4_9STRA) HSP 1 Score: 157 bits (398), Expect = 7.800e-42 Identity = 99/197 (50.25%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 85 MYTSQEIGAAPDTVPLPFPDAKVRLGPLNTIIQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAK---ALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAQEDGAELK---AVDLSVDQNPNSPKE 657
++ S EIG P VPLPF + QVGT+SCHG+EPSY D AKINQDRG VYPF + ALF+VFDGHGE GD VS F M+E+ L AH SL AL ES++ VD L G +A FSGTTAV+ L++ LW+ANAGDSR LA D A K A DLS DQNP+SP E
Sbjct: 210 VFRSLEIGDVPK-VPLPFREG-----------QVGTFSCHGIEPSYL----DTRPFVAKINQDRGICVYPFAGHERMALFAVFDGHGEQGDKVSEFCMYEIPRALEAHSSLKGGDGNVIYALKESFLTVDSRLNLEVGIDAFFSGTTAVACLVKGKRLWVANAGDSRCTLATADPAGTKRLLARDLSTDQNPDSPGE 390
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A6U8RHK7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6U8RHK7_EMIHU) HSP 1 Score: 154 bits (389), Expect = 1.390e-41 Identity = 97/206 (47.09%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 64 RRQNSMAMYTSQEIGAAPDTVPLPFPDAKVRLGPLNTIIQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKH--ALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMR-----ENNLWIANAGDSRAVLAQEDGAELKAVDLSVDQNPNSPKEQ 660
RRQ ++M S E+GA V PFP V GTYSCHGVEP S G + AKINQDRGCV YPF + + ALF VFDGHG GD VS++ MH +QA L HP L DP AL + ++ +D L +A SGTTAV L R +W+AN GDSRAV+A + G +LKAV LS DQ P++P EQ
Sbjct: 55 RRQRRLSM--SPEMGAK--AVAAPFPPEVV-----------GTYSCHGVEPGRSAGE-----MMAKINQDRGCVCYPFGVEGEKTSALFCVFDGHGVCGDKVSHYAMHGMQAKLEQHPLLASDPKTALEQVFIAIDTELQTDSSIDAELSGTTAVVALARWTQGGRGKVWVANVGDSRAVMAVQKGGKLKAVALSEDQKPDTPAEQ 240
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A7S3T9D1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T9D1_9SPIT) HSP 1 Score: 153 bits (387), Expect = 2.680e-41 Identity = 93/205 (45.37%), Postives = 115/205 (56.10%), Query Frame = 1
Query: 67 RQNSMAMYTSQEIGAAPDTVPLPFPDAKVRLGPLNTIIQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPF---NEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMR-----ENNLWIANAGDSRAVLAQEDGAELKAVDLSVDQNPNSPKE 657
RQ ++M S E+G P P PF VGTYSCHGVEP G +AKINQDRGC+ YPF + + ALF VFDGHG GD VS++ M+ +Q L HP L+ DPA AL + ++ VD L +A SGTTAV LMR + W+ANAGDSRAVL ++ LKAV LS DQ P++P E
Sbjct: 55 RQRRLSM--SPEMGVRPPAPPFPFEI-------------VGTYSCHGVEPGLRQGE-----TSAKINQDRGCICYPFGASDSEMTQALFCVFDGHGACGDKVSHYAMNNIQEKLENHPQLMSDPASALKDVFLSVDSQLRKDPSIDAELSGTTAVVCLMRWMKGGKGKAWVANAGDSRAVLGVKENGRLKAVPLSQDQKPDTPAE 239
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A8J2T2A4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2A4_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.740e-40 Identity = 80/159 (50.31%), Postives = 105/159 (66.04%), Query Frame = 1
Query: 184 VGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAQEDGAELKAVDLSVDQNPNSPKEQ 660
VGT+SCHG+EPSY T DG AKINQDRGCVV P+ EDP+ ALF+V+DGHGEHG VS F M ++ L HPS D AL +++ D ++ SGTTAV ++ + L +A+AGDSRAVLA + G+++ A DL+VD NP+ P+EQ
Sbjct: 94 VGTFSCHGIEPSYFT-----DGAMAKINQDRGCVVQPYGEDPRRALFAVYDGHGEHGQEVSQFAMEYIRDNLHKHPSFSTDLPVALKTTFLACDLAMKKDPTVRCKHSGTTAVVAVLVDKTLTLASAGDSRAVLATKKGSKIIAKDLTVDHNPDVPEEQ 247
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A7R9YNV0_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNV0_DIALT) HSP 1 Score: 149 bits (376), Expect = 8.730e-40 Identity = 92/192 (47.92%), Postives = 113/192 (58.85%), Query Frame = 1
Query: 85 MYTSQEIGAAPDTVPLPFPDAKVRLGPLNTIIQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAQED-GAELKAVDLSVDQNPNSPKE 657
M S E+G LPFP + VGTYSCHGVEP G +AKINQDRG V YPF + + A+FSVFDGHG GD VS+F M+ LQA L HP L D PA+AL SY++ D L +A SGTTAV +M + L++ANAGDSRAVLA+ + A+DLS DQ P++P E
Sbjct: 59 MSMSPEMGVVRKKSDLPFP-----------LEIVGTYSCHGVEPGMRHGE-----TSAKINQDRGAVCYPFADSDEIAMFSVFDGHGVCGDKVSHFAMNTLQAILEDHPLLTDKPAQALKHSYLQCDSLLKQEPTIDAELSGTTAVVTVMIGSKLFVANAGDSRAVLARRSPSGGVIALDLSEDQKPDTPAE 234
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Match: A0A7S0BYZ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYZ2_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.920e-38 Identity = 81/173 (46.82%), Postives = 107/173 (61.85%), Query Frame = 1
Query: 184 VGTYSCHGVEPSYSTG-----GDDDD---GVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAQED-------GAELKAVDLSVDQNPNSPKE 657
+GTYSCHG+EP Y G++DD V +KINQDRG V YP+ + ALF+ +DGHGE G++VS + M E+Q L H S D A +++V+VDESLA + E +SGTTA V+MRE L IAN GDSRAV+ ++ E + DL+VDQNP+SP E
Sbjct: 59 IGTYSCHGIEPLYDEEEENEIGENDDVKLNVVSKINQDRGGVAYPYADHVHTALFAAYDGHGEGGELVSQYCMSEIQKRLEKHASFPSDMEDAFKKTFVEVDESLAHRENLEPLYSGTTACVVVMREGQLHIANVGDSRAVIGRKKKYPNRKTNREYDSFDLTVDQNPDSPGE 231 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15275.3720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15275.3720.1 >prot_E-fasciculatus_F_contig15275.3720.1 ID=prot_E-fasciculatus_F_contig15275.3720.1|Name=mRNA_E-fasciculatus_F_contig15275.3720.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=220bp RKRRLSVTSTQAAPKVAVAESRRQNSMAMYTSQEIGAAPDTVPLPFPDAKback to top mRNA from alignment at E-fasciculatus_F_contig15275:198..2324+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15275.3720.1 ID=mRNA_E-fasciculatus_F_contig15275.3720.1|Name=mRNA_E-fasciculatus_F_contig15275.3720.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2127bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15275:198..2324+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15275:198..2324+ >mRNA_E-fasciculatus_F_contig15275.3720.1 ID=mRNA_E-fasciculatus_F_contig15275.3720.1|Name=mRNA_E-fasciculatus_F_contig15275.3720.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1320bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15275:198..2324+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |