prot_E-fasciculatus_F_contig15268.3714.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15268.3714.1
Unique Nameprot_E-fasciculatus_F_contig15268.3714.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length443
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15268.3714.1 vs. uniprot
Match: A0A6H5KE00_9PHAE (YTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE00_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 1.270e-64
Identity = 287/416 (68.99%), Postives = 289/416 (69.47%), Query Frame = 0 
Query:    1 YGQSFQQPYNQGGYASKTSQLPHGQLQQPSMNTSYMN-YGSGAGXXXXXXXXXXXXXXPS---------GGWIDGGVRERGGGGFSGLSAEANGFVPSNFTPASGVAGGGEVVGGGMGTASTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGGVQPQHQVSGDDAXXXXXXXXXXXXXXX--TTSWADIVRPEGFRSSDQKAXXXXXXXXXXXXXXXXXXXXXXSNEVSAMLNTPGAFPAPGAYSGGGVGYSGLSAGPFAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSSNQVLGVGEEGSTSRGLSVPGDVAXXXXXXXXXXXXXXXXXDAAVVDGGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VMDGTANGMFPA 402
            YGQSFQQ YNQGGY SK SQLPHGQLQQP MNTSYMN YGS AG           XXX           GGWIDGG+RERGGGGFSGLSAEANGFVPSNFTPASGVAGGGEV            XXXXXXXXXXXXXXXXXXXXXXXX               X                 XXXXXXXXXXXXX    TTSWADIVRPEGFRSSDQKA          XXXXXXXX    SNEVSAMLNTP AFPAPGA+SGGGVGYSGLSAGPFAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           N  NQVLGVGEEGSTSRGL  PGDVA              XXXDA   DGGYN  XXXXXXXXXXXXXXXXXXXXXXXXXXXX  VMDGTANGMFPA
Sbjct:    4 YGQSFQQSYNQGGYPSKASQLPHGQLQQPPMNTSYMNTYGSVAGGDGSAQTQQPRXXXXXXXXXXXXXXGGWIDGGLRERGGGGFSGLSAEANGFVPSNFTPASGVAGGGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMPALPTAPSSTATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQKRTTSWADIVRPEGFRSSDQKASAAAAPSSTKXXXXXXXXAAATSNEVSAMLNTPEAFPAPGAFSGGGVGYSGLSAGPFAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEGPGGNDGNN--NQVLGVGEEGSTSRGLPAPGDVAGDQAKGDAGDQAGAXXXDATAGDGGYNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMDGTANGMFPA 417
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15268.3714.1 vs. uniprot
Match: D7G0F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F2_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 3.680e-24
Identity = 69/83 (83.13%), Postives = 69/83 (83.13%), Query Frame = 0 
Query:  187 TTSWADIVRPEGFRSSDQKAXXXXXXXXXXXXXXXXXXXXXX--SNEVSAMLNTPGAFPAPGAYSGGGVGYSGLSAGPFAASP 267
            TTSWADIVRPEGFRSSDQKA            XXXXXXXXXX  SNEVSAMLNTPGAFPAPGAYSGGGVGYSGLSAGPFAASP
Sbjct:   10 TTSWADIVRPEGFRSSDQKAAAAAGAAPRSTKXXXXXXXXXXXTSNEVSAMLNTPGAFPAPGAYSGGGVGYSGLSAGPFAASP 92
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15268.3714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KE00_9PHAE1.270e-6468.99YTH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0F2_ECTSI3.680e-2483.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15268contigE-fasciculatus_F_contig15268:255..3024 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15268.3714.1mRNA_E-fasciculatus_F_contig15268.3714.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15268 255..3024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15268.3714.1 ID=prot_E-fasciculatus_F_contig15268.3714.1|Name=mRNA_E-fasciculatus_F_contig15268.3714.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=443bp
YGQSFQQPYNQGGYASKTSQLPHGQLQQPSMNTSYMNYGSGAGGDGQAQT
QQPQQQQPSGGWIDGGVRERGGGGFSGLSAEANGFVPSNFTPASGVAGGG
EVVGGGMGTASTQGTGGANNASTMSSAGMGGGAAGVGGDMPALPSAPSST
ATAAVAVGGVQPQHQVSGDDASSSSPPPPPPAAQKRTTSWADIVRPEGFR
SSDQKASAAAASSSAKASTTQSAAAAAASNEVSAMLNTPGAFPAPGAYSG
GGVGYSGLSAGPFAASPPPSSSAAVASSSGRRQQQGAGGGGVANGGGLAG
GGGGNDGNSSNQVLGVGEEGSTSRGLSVPGDVAGDEAKGDAGGQAGAAAG
DAAVVDGGYNNNNGYPPYQQQQQYYQQQQAGGVPVAGGGGVMDGTANGMF
PAAGGNGVPSQQQQQQLVPAMFGNGGGPGGGGGGGAGGSGVGT
back to top