prot_E-fasciculatus_F_contig15259.3711.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15259.3711.1
Unique Nameprot_E-fasciculatus_F_contig15259.3711.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length294
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15259.3711.1 vs. uniprot
Match: A0A6H5KX21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX21_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 8.820e-100
Identity = 216/294 (73.47%), Postives = 227/294 (77.21%), Query Frame = 0 
Query:    1 MASVAALAFCSAAAPSHVRCLGVTGALGTSYWAAALPTSSRATAFPTGSGSSLRSMEYVNVKQGGRSRRRPPLSLTRAGPWSAPPPLPATASRDTAARGRXXXXXXXXXXXXXXXXALPSSIRLLAVARTLLRRVRKATAQPPRTXXXXXXXXXXXXXXXXELPPAQVKHAGLVLVPWLWRPFQQTVVAKSAGGAAAGSVLEVGAKTMSATTTRVTKPALSFVQLQVRREAILAALILIAAPLLLRSWARREAEHHDTLDCRNVVQTYLIASSGWTCAVLAAVAGKPITAVVLQ 294
            MASVAALAFCSAAAPSHV C+G TGAL TS+WAAA PT+S          SSLR  EYVNVK GGRSRRRPPLSLTRAGPWS PPPLPA+A RD+A R R    XXXXXXXXXXXX                             XXXXXXXXXXXX    E PPAQ+KHAGLVLVPWLW PFQQ VVAKSAGGAAAG VLEVGA+TMSATT RVTK ALSFVQLQVRREAIL+ALILI APL+LR WARREAEHHDTL+CRNVVQTYLIASSGW CAVLAAVAGKPI+AVVLQ
Sbjct:    1 MASVAALAFCSAAAPSHVSCMGSTGALSTSHWAAAFPTNSXXXXXXXXXTSSLRPKEYVNVKHGGRSRRRPPLSLTRAGPWSTPPPLPASALRDSAPRERHREEXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXVAGAERPPAQLKHAGLVLVPWLWWPFQQPVVAKSAGGAAAGPVLEVGARTMSATT-RVTKSALSFVQLQVRREAILSALILIVAPLVLRWWARREAEHHDTLECRNVVQTYLIASSGWVCAVLAAVAGKPISAVVLQ 286
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BLAST of mRNA_E-fasciculatus_F_contig15259.3711.1 vs. uniprot
Match: D7FN96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN96_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 2.150e-35
Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0 
Query:  208 MSATTTRVTKPALSFVQLQVRREAILAALILIAAPLLLRSWARREAEHHDTLDCRNVVQTYLIASSGWTCAVLAAVAGKPITAVVLQ 294
            MSATT R TKPALSFVQLQVRREAIL+ALIL+AAPLLLR WARREAEHHDTL+CRNVVQTYLIASSGW CAVLAAVAGKPI+AVVLQ
Sbjct:    1 MSATT-RATKPALSFVQLQVRREAILSALILVAAPLLLRWWARREAEHHDTLECRNVVQTYLIASSGWACAVLAAVAGKPISAVVLQ 86
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15259.3711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX21_9PHAE8.820e-10073.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN96_ECTSI2.150e-3590.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..294
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availableTMHMMTMhelixcoord: 231..248
NoneNo IPR availableTMHMMTMhelixcoord: 269..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15259contigE-fasciculatus_F_contig15259:971..2855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15259.3711.1mRNA_E-fasciculatus_F_contig15259.3711.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15259 971..2855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15259.3711.1 ID=prot_E-fasciculatus_F_contig15259.3711.1|Name=mRNA_E-fasciculatus_F_contig15259.3711.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=294bp
MASVAALAFCSAAAPSHVRCLGVTGALGTSYWAAALPTSSRATAFPTGSG
SSLRSMEYVNVKQGGRSRRRPPLSLTRAGPWSAPPPLPATASRDTAARGR
HREEEEEEEQFQQQQQALPSSIRLLAVARTLLRRVRKATAQPPRTPRPAA
AAAAAVAAEAAELPPAQVKHAGLVLVPWLWRPFQQTVVAKSAGGAAAGSV
LEVGAKTMSATTTRVTKPALSFVQLQVRREAILAALILIAAPLLLRSWAR
REAEHHDTLDCRNVVQTYLIASSGWTCAVLAAVAGKPITAVVLQ
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