mRNA_E-fasciculatus_F_contig15256.3709.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: D8LLC3_ECTSI (3-oxoacyl-[acyl-carrier-protein] synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC3_ECTSI) HSP 1 Score: 307 bits (787), Expect = 2.430e-101 Identity = 158/172 (91.86%), Postives = 163/172 (94.77%), Query Frame = 1
Query: 1 MARLLPPPALISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR 516
MARLLPPPA+ISQRRVVVTGLGAVTPLANGMQASWERLLEGKCG+RRLKPSSQ DSDGH S KLSDR+ TFPTSLAGEVDRG ERAGQFPGPDSAA A + R GTP+FIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR
Sbjct: 1 MARLLPPPAIISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGIRRLKPSSQ-DSDGHRSRKLSDRMTTFPTSLAGEVDRGLERAGQFPGPDSAATATSLR-GTPEFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR 170
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: L8GQ49_ACACA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQ49_ACACA) HSP 1 Score: 134 bits (337), Expect = 2.280e-34 Identity = 73/162 (45.06%), Postives = 103/162 (63.58%), Query Frame = 1
Query: 31 ISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR 516
+S+RRVVVTGLG VTPLA G+QA+W RL+ KCG+RR+ +Q D V P +AG V RG + G+F ++ TP FIQFA+ AA++ALD + W+ TD E++R GVA+GSGIG+L+++ TL+ GYR+++PHFIP+
Sbjct: 1 MSKRRVVVTGLGVVTPLATGVQATWGRLINAKCGIRRI---TQFD------------VSDLPAKIAGNVLRGKDEHGEFE--LDKWVDKRDQAHTPAFIQFALSAARQALDDARWQPTTDAEKERTGVAVGSGIGTLDEIVSTANTLQTSGYRKVSPHFIPK 145
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: A0A835Z0F5_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F5_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.070e-34 Identity = 79/172 (45.93%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 13 LPPPALISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRS---GTPDFIQFAMHAAKEALDMSGWRAETD-RERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR 516
LPPP + QRRVVVTGLGAVTPLA GM+ +W+RLLEG+CG+R+L+P + H ++ PT+LA + RG G + A S P FIQ+A+ A +EAL + W + D +RAGVAIG+GIGSLED D + RG RR++PHFIPR
Sbjct: 5 LPPPLALVQRRVVVTGLGAVTPLACGMETTWKRLLEGQCGIRKLQPDEKDYPLTH--------IEQLPTTLAATISRGK-------GEHAEAEFLFDESKWPSQPRFIQYALQATQEALRAARWSSAADPAAAERAGVAIGTGIGSLEDTMDAHAAALARGPRRISPHFIPR 161
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: A0A1Y1YYF8_9FUNG (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YYF8_9FUNG) HSP 1 Score: 117 bits (293), Expect = 6.180e-28 Identity = 73/170 (42.94%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 31 ISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLK--------PSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR 516
I+ RRVVVTGLG VTPLA G++ASWERL+ K G+ L PS+Q D DG P+++AG V RG + F P R DF Q+A+ AA++AL+ +GW + + +R R GV +GSGIGS+ED+A T +GYRR++P FIPR
Sbjct: 3 IATRRVVVTGLGLVTPLATGVKASWERLINSKSGLVSLTKENRPEHFPSTQHDFDG------------LPSTVAGVVLRGSKTENLFD-PSEWLERGDDRK-MADFTQYALCAAQQALEDAGWLPDNEEDRIRTGVCVGSGIGSVEDIASTANTYYNQGYRRVSPMFIPR 158
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: A0A7S0DMN0_9EUKA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DMN0_9EUKA) HSP 1 Score: 116 bits (290), Expect = 2.880e-27 Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = 1
Query: 19 PPALISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTL--EGRGYRRLTPHFIPR 516
PPA QRRVVVTGLGAVTPLAN ++ +W+++L+GK GV+ L + + PT +A V F G P D A FIQ++M AAKEALD + W E+ +R + GV+IGSGIG +E++ D ++ EGRGY++++P FIP+
Sbjct: 77 PPAA-PQRRVVVTGLGAVTPLANNVKETWQKILDGKTGVKML---------------TDPKFEVLPTKIAAYVSD-FSSDGIVPKKDQKQMA--------PFIQYSMVAAKEALDDANWHPESPEDRQKTGVSIGSGIGGIEEITDNHKEFMGEGRGYKKISPRFIPK 219
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: A0A3Q8BIU7_9SPER (Beta-ketoacyl-[acyl-carrier-protein] synthase I (Fragment) n=17 Tax=Cupressaceae TaxID=3367 RepID=A0A3Q8BIU7_9SPER) HSP 1 Score: 113 bits (283), Expect = 1.930e-26 Identity = 65/166 (39.16%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 19 PPALISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR 516
PP QRRVVVTGLG V+PL G++ASWE L+EGKCGVR L + + +G + L ++ P+ + V RG + G+F + + FI +A+ A++EAL +GW +E ++++ GVAIG GIGS+ D+ + + + + RRL+P FIPR
Sbjct: 36 PPPSSPQRRVVVTGLGMVSPLGTGVKASWEALIEGKCGVRAL-TAEDLNMEGFENETLLRTLEQLPSQVVASVPRG-KNVGEFD--EEYWLHLRDKKYMARFISYALCASEEALRDAGWSSEDTEQKEKTGVAIGGGIGSISDILEAAKLISEQRVRRLSPFFIPR 197
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: UPI0003F98FE3 (beta-ketoacyl-ACP synthase II n=1 Tax=Inquilinus limosus TaxID=171674 RepID=UPI0003F98FE3) HSP 1 Score: 112 bits (280), Expect = 3.640e-26 Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 1
Query: 40 RRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIP 513
RR+VVTG+GAV+PLANG++ASW RLL G+ G+RRL D LS ++ S+A + + GF+ PD+A R FIQFAM AA EA+ SGWR T RE++R I SG+G + + RT++ +G RRL+P +P
Sbjct: 2 RRIVVTGMGAVSPLANGVEASWRRLLAGRSGLRRLPEEMVAD--------LSAKIGGVVPSIAEDPEAGFD-------PDAAVPPKDQRK-MDRFIQFAMAAADEAVAQSGWRPATPREQERTATIIASGVGGFPYIVETVRTVDQKGVRRLSPFTVP 143
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: A0A2D4C8J2_PYTIN (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8J2_PYTIN) HSP 1 Score: 112 bits (280), Expect = 4.230e-26 Identity = 68/165 (41.21%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 22 PALISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR 516
P + + RRVVVTGLGAVTP G++ SWE LL+ +C ++ ++ G +S L ++ A +V RG F D A RS DFI FAM AAKEA++ SGW ++D ER+RAGVAIG+GIG+++++ D + + +RR++P FIPR
Sbjct: 23 PPVTAPRRVVVTGLGAVTPFGVGVKHSWEALLDSQCAIQPIQ--------GFDTSSLGCKI-------AAQVPRGDAATTHFRAKDWINPKNA-RSQDVDFIAFAMAAAKEAVEDSGWAPQSDEERERAGVAIGAGIGNIQEIVDVGALVRDQKHRRVSPFFIPR 171
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: A0A554UAD2_9MYCO (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Bacteria TaxID=2 RepID=A0A554UAD2_9MYCO) HSP 1 Score: 112 bits (279), Expect = 5.060e-26 Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 1
Query: 40 RRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIP 513
RR+VVTG+GAV+PLANG++ASW RLL+G+ G+RRL D L+ +V S+A + + GF+ PD AA + FIQFAM AA+EA+ SGWR DR R R I SG+G + + RT++ +G RRL+P +P
Sbjct: 2 RRIVVTGMGAVSPLANGVEASWRRLLQGRSGLRRLPEEMVPD--------LAAKVAGVVPSIAEDPEAGFD-------PD-AAVPPKDQKKMDRFIQFAMAAAEEAVAQSGWRPTDDRARQRTATVIASGVGGFPYIVETVRTVDQKGARRLSPFTVP 143
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Match: A0A7S0L1P9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L1P9_9EUKA) HSP 1 Score: 105 bits (263), Expect = 6.760e-26 Identity = 64/159 (40.25%), Postives = 83/159 (52.20%), Query Frame = 1
Query: 40 RRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPSSQQDSDGHSSSKLSDRVKTFPTSLAGEVDRGFERAGQFPGPDSAAAAAASRSGTPDFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPR 516
RRVVVTG+G VTPL ++SW LL G GV+RL L R+ +G VD G D A A F+QFA+ AA EALD + W +D+ER+R GVAIGSGIG L + + L RG+RR++PHF+P+
Sbjct: 2 RRVVVTGIGMVTPLGRSSESSWRALLAGASGVKRLA----------CLDALPSRLGATVARCSGTVDGRLSARG-----DEATLA--------PFVQFALSAAAEALDSAKWYPTSDKERERTGVAIGSGIGGLSETVEAAEALRTRGHRRVSPHFVPK 137 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15256.3709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15256.3709.1 >prot_E-fasciculatus_F_contig15256.3709.1 ID=prot_E-fasciculatus_F_contig15256.3709.1|Name=mRNA_E-fasciculatus_F_contig15256.3709.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=173bp MARLLPPPALISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGVRRLKPback to top mRNA from alignment at E-fasciculatus_F_contig15256:406..2784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15256.3709.1 ID=mRNA_E-fasciculatus_F_contig15256.3709.1|Name=mRNA_E-fasciculatus_F_contig15256.3709.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2379bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15256:406..2784- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15256:406..2784- >mRNA_E-fasciculatus_F_contig15256.3709.1 ID=mRNA_E-fasciculatus_F_contig15256.3709.1|Name=mRNA_E-fasciculatus_F_contig15256.3709.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1038bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15256:406..2784- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |