mRNA_E-fasciculatus_F_contig1525.3707.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A7S0Z2X0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2X0_9CRYP) HSP 1 Score: 196 bits (497), Expect = 1.860e-54 Identity = 116/270 (42.96%), Postives = 160/270 (59.26%), Query Frame = 1
Query: 1 TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVT-ILYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMK--WVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
+++D ++L++HYCVYP+ P G L LST YN FR+LFLFT+ P A+ VV T ++Y A G N LY+++L G + ++FLVGTSFVHY RYI TY+HR ++ + FK D L FK +A++ + +HY AL A + A E D+ V LA+I G +S + LGVDGTYFG ELG + + +V +FPY +PHPMI+ Q+VA G H L FRAAWP+L+PAH YL+ M+QE
Sbjct: 412 SNSDFRIVLKVHYCVYPKWALPFGLLLGWLSTRYNKAFRALFLFTINPKTPFEHFSAWNVVFWTKVVYAAEAYFGYNNALYISLLALLGWRFNYLIFLVGTSFVHYLRYINTYYHR-DNVAYTVFKRDVLIFKSLAVAQLCYHYAHALTAGF-TAAPGELDT----------------VGLAMIAGGYALSVYTTHQLGVDGTYFGIELGFVKKQKHFVQSFPYGVIPHPMILSQVVALLGFHKLAAFRAAWPYLVPAHVCLYLIHMVQE 663
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A6U2API0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2API0_HEMAN) HSP 1 Score: 194 bits (494), Expect = 5.000e-54 Identity = 110/270 (40.74%), Postives = 158/270 (58.52%), Query Frame = 1
Query: 1 TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVT-ILYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMK--WVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
T+ D ++L++HYC+YP+ P G+L LST YN FR+LFLFT+ P A+ VV T ++Y G N++Y+ L G V+ ++FLVGTSFVHY RYI TY+HR +++ + FK D L FK +A++ + +HYV+AL + + +G LA++ G +S + LGVDGTYFG ELG + + +V +FPY +PHPMI+ Q+VA G H L FRAAWP+L+PAH Y + M+QE
Sbjct: 412 TNKDFRIVLKVHYCIYPKWALPFGRLLGWLSTRYNKAFRALFLFTINPKTPFEHFSAWNVVFWTKVVYAIEAYFGYNNVVYIGGLALLGWRVNYLIFLVGTSFVHYLRYINTYYHR-TNVAYTVFKRDVLIFKSLAVAQILYHYVSALTSGFTVTPQELDVAG-----------------LAMVAGGYALSVYTTHQLGVDGTYFGIELGFVKKQKHFVQSFPYGVIPHPMILSQMVALLGFHKLDAFRAAWPYLVPAHICLYFIHMMQE 663
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A061S3V0_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S3V0_9CHLO) HSP 1 Score: 186 bits (472), Expect = 7.600e-52 Identity = 116/270 (42.96%), Postives = 159/270 (58.89%), Query Frame = 1
Query: 4 DTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVT-ILYRAAIETGLQNILYVAVLFAAGRLVHPV--VFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSC-VPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
+T + L+ HY VYPRVL P G+L L+T YN+ R+LFL T+ ++SR+ A+LV+ T ++ G N+LYVA L AA RL+ P VFLVGTSFVHY Y++ +F+R L G F +A+FFK +A+ +A Y+ + E D VS AL++AG +S A+ A+G+D TYFG E+G+ + KW++AFPYS +PHPMIVG +V G H L RAA+PWL+PAH AFY LQE
Sbjct: 270 NTGHRITLKNHYLVYPRVLRPYGRLLGRLTTAYNVAARNLFLSTIKTETLASRLGAWLVLGGTQAMFLTQQYVGFPNLLYVACLAAADRLLLPGRNVFLVGTSFVHYCMYMS-HFYRRYGLAHGTFVRNAVFFKCLAVGQLALMYLRSF----------EPDP----------------VSAALLVAGYGLSASAAAAIGIDRTYFGSEMGIYKPKWISAFPYSLGIPHPMIVGSVVGLLGFHKLAGVRAAYPWLVPAHVAFYAAHCLQE 512
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A6U4GRG3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GRG3_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.180e-50 Identity = 106/243 (43.62%), Postives = 142/243 (58.44%), Query Frame = 1
Query: 88 LSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTILYRAA-IETGLQNILYVAVLFAAGRLVHPV----VFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
L+ GYN+LFR+LFL T++P + S++ AF VV+VT L A + G N LYV AA H VFL TS++HY RYI TY++RG ++++G FK D LF+K +A++ + Y LL + VS+A++IAG VS LA++ALG++GTYFG ELG CE W+ AFPY VPHPMI GQL A AG+ + F AA+PWL P H Y + M QE
Sbjct: 2 LNVGYNMLFRALFLATISPDSIVSKIGAFFVVHVTELVNAMWLYVGPHNALYVV---AAAVCAHTFRDYRVFLAATSYLHYFRYIGTYYYRG-EVNYGNFKRDVLFYKTIAVTQLVGLY---LLNFFDEPVSLPAF-----------------VSIAMMIAGYAVSALATKALGMNGTYFGIELGRCEPVWIDAFPYGYVPHPMITGQLFAMAGMLVNTNFFAAFPWLAPIHMLMYTIHMFQE 220
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A096P773_OSTTA (Phospholipid methyltransferase n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P773_OSTTA) HSP 1 Score: 180 bits (457), Expect = 5.370e-49 Identity = 107/268 (39.93%), Postives = 151/268 (56.34%), Query Frame = 1
Query: 1 TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTI-LYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
T+ DR + ++LHYCVYP+ P G+ LS YN L R LFL T+ P+G+ R MAF+V+ VT + + G+ NI V L+A G+ +HP F TS+ HY YI TY H ++FG FK + +F+K +AL+H+A YV FD I S+ +I+ G +ST A+ ALG+D TYFG ELG + +V+ FPY+ VPHPMIVG ++ G+H + R A P+ +P HC YL+ M+QE
Sbjct: 327 TNPDRRITMKLHYCVYPKCFGPFGEGLLHLSVMYNTLARKLFLNTIHPTGIW-RFMAFMVLFVTRGAFLVSKYAGMNNIASVLALYAVGKYIHPFFFFAMTSYTHYCMYIATY-HVRDRINFGMFKRNVVFWKTLALTHLAVAYVKNF-----------------------QFDPI---SIIMIVCGYGLSTSAAVALGMDQTYFGVELGEVKPNFVSGFPYNVVPHPMIVGSMLGLLGIHKMDGLREALPYAVPMHCFMYLLHMIQE 566
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A7S0H705_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H705_9EUKA) HSP 1 Score: 179 bits (454), Expect = 1.090e-48 Identity = 100/263 (38.02%), Postives = 151/263 (57.41%), Query Frame = 1
Query: 19 LLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTILY-RAAIETGLQNILYVAVLFAAGRLVH-PVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
+ L++HY YP++L P GKL L+ YN+ R+LFL T+ P+ +++R A V+ T L + GL N+ YV +LF A + P +F +GTS++HY Y+ T++ R ++ FG FK D +F+K +AL+H+ ++Y+ FD I SLAL+ G ++ A++ALG+D TYFG ELG C+ ++V++FPY+C+PHPMIVG + G H L R P+L+P H A YL M QE
Sbjct: 356 ICLKIHYVTYPKILRPWGKLLKRLTVNYNLNARALFLATIEPNSLTARASALTVLGTTWLTEKVQTNMGLNNLFYVLILFLASTVSPIPYLFTIGTSYLHYIIYLATFYSR-REIAFGLFKRDVIFYKSIALTHILYYYLKNF-----------------------EFDVI---SLALLGVGYFIAIAATKALGIDKTYFGSELGHCKPEYVSSFPYNCIPHPMIVGACIGLLGFHKLNGLREEVPYLIPVHIALYLTHMCQE 591
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A1Y5ICG6_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5ICG6_OSTTA) HSP 1 Score: 181 bits (459), Expect = 3.410e-48 Identity = 107/268 (39.93%), Postives = 151/268 (56.34%), Query Frame = 1
Query: 1 TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTI-LYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
T+ DR + ++LHYCVYP+ P G+ LS YN L R LFL T+ P+G+ R MAF+V+ VT + + G+ NI V L+A G+ +HP F TS+ HY YI TY H ++FG FK + +F+K +AL+H+A YV FD I S+ +I+ G +ST A+ ALG+D TYFG ELG + +V+ FPY+ VPHPMIVG ++ G+H + R A P+ +P HC YL+ M+QE
Sbjct: 848 TNPDRRITMKLHYCVYPKCFGPFGEGLLHLSVMYNTLARKLFLNTIHPTGIW-RFMAFMVLFVTRGAFLVSKYAGMNNIASVLALYAVGKYIHPFFFFAMTSYTHYCMYIATY-HVRDRINFGMFKRNVVFWKTLALTHLAVAYVKNF-----------------------QFDPI---SIIMIVCGYGLSTSAAVALGMDQTYFGVELGEVKPNFVSGFPYNVVPHPMIVGSMIGLLGIHKMDGLREALPYAVPMHCFMYLLHMIQE 1087
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: L1JFK3_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JFK3_GUITC) HSP 1 Score: 178 bits (452), Expect = 4.350e-48 Identity = 106/269 (39.41%), Postives = 148/269 (55.02%), Query Frame = 1
Query: 4 DTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVT-ILYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMK--WVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
+ D ++L++H+ +YP WP GKL LST YN LFRSLFL+T+ P G+ +R A+ VV T ++++ + G NI Y+A L VFLVGTSF+HY RYI TY+HR + +G FK D FK +++S + Y +A+ + S + A+I G +S + LGVDGTYFG ELG + +V FPY +PHPMI+ Q VA G FR++WP+L+PAH Y+V MLQE
Sbjct: 399 NKDFRIVLKVHHVIYPSWAWPFGKLMGILSTRYNKLFRSLFLYTINPKGLFNRFAAWNVVFWTKVVHQIEEKVGYCNIGYIAALAVVSFFTTYKVFLVGTSFIHYLRYINTYYHR-EGVAYGVFKRDVFLFKALSISQLVLLYASAVTNNFTDLSLALKTSP---------------IDYAMIFGGYALSIYTTFQLGVDGTYFGIELGFVKASKHYVQKFPYGVIPHPMILSQCVAMLGFMRAEAFRSSWPYLVPAHVCLYMVHMLQE 651
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A7S3HBU4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBU4_9STRA) HSP 1 Score: 175 bits (443), Expect = 7.490e-48 Identity = 105/264 (39.77%), Postives = 150/264 (56.82%), Query Frame = 1
Query: 19 LLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTILYRAAIET--GLQNILYVAVLFAAGRLVHPV-VFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
++L+LHYC+YPRVL PLG L + + YN+ FR+LFL T+ P + +A+ V TIL+ IET G +N+LY+ + A + +F TS+VHY RYI+TY+ R +DFG FK D L FK VAL+ + + Y FD I S+A+I++G VS +A+ A+G+D TYF ELG+ KW+ FPY +PHPMIV Q+ A G++ +RA WP+++P H Y+ MLQE
Sbjct: 245 VVLKLHYCIYPRVLAPLGWLMYSFNVTYNMSFRALFLKTINPQSLYEHFLAWNVNLNTILFDR-IETLLGQRNVLYLLFMLALWYVTGMYEIFFAFTSYVHYFRYISTYYVR-KGIDFGSFKRDVLLFKSVALAQLFYPYFFPTTRPF-------------------EFDPI---SIAMIVSGYAVSVMATNAIGIDRTYFAAELGLVPHKWIDQFPYGYIPHPMIVSQVFALLGLYKAAHYRAEWPYVVPVHVLLYVTHMLQE 484
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A9V7R1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7R1_MONBE) HSP 1 Score: 171 bits (434), Expect = 7.560e-46 Identity = 109/271 (40.22%), Postives = 150/271 (55.35%), Query Frame = 1
Query: 13 RPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAF-LVVNVTILYRAAIE-TGLQNILYVAVLFAAGRLVHP------VVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
R ++L++HYCVYPR L PLGKL + YN+ FR+LFL T+ P +++ +VV +T L A G N LY+ VL L P +FL GT+++HY RYI T++ R +++F FK D L FK V+L+ + + Y+A L D +SL+LI G T+S LA++ALG+D TYFG ELG CE KW+TAFPY +PHPMIV Q++A AG L R + WL+ H Y M+QE
Sbjct: 331 RRVVLKIHYCVYPRQLLPLGKLLHLANVLYNMCFRALFLATIKPPETPLEILSGQVVVQMTRLVNAFQRFVGFPNALYLGVL---AYLASPYGLNCYTLFLAGTAWIHYLRYIATFYWR-RNINFEAFKRDVLLFKSVSLAQLGFLYLARL------------DLAHPDW-----------LSLSLIATGYTLSILATKALGIDRTYFGVELGFCEPKWITAFPYGTIPHPMIVSQMLALAGFLKLAALRQDYAWLIAGHIGLYFCHMVQE 574 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1525.3707.1 >prot_E-fasciculatus_F_contig1525.3707.1 ID=prot_E-fasciculatus_F_contig1525.3707.1|Name=mRNA_E-fasciculatus_F_contig1525.3707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=267bp TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGback to top mRNA from alignment at E-fasciculatus_F_contig1525:888..2330+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1525.3707.1 ID=mRNA_E-fasciculatus_F_contig1525.3707.1|Name=mRNA_E-fasciculatus_F_contig1525.3707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1443bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1525:888..2330+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1525:888..2330+ >mRNA_E-fasciculatus_F_contig1525.3707.1 ID=mRNA_E-fasciculatus_F_contig1525.3707.1|Name=mRNA_E-fasciculatus_F_contig1525.3707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1602bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1525:888..2330+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |