mRNA_E-fasciculatus_F_contig1525.3707.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1525.3707.1
Unique NamemRNA_E-fasciculatus_F_contig1525.3707.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A7S0Z2X0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2X0_9CRYP)

HSP 1 Score: 196 bits (497), Expect = 1.860e-54
Identity = 116/270 (42.96%), Postives = 160/270 (59.26%), Query Frame = 1
Query:    1 TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVT-ILYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMK--WVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            +++D  ++L++HYCVYP+   P G L   LST YN  FR+LFLFT+ P        A+ VV  T ++Y A    G  N LY+++L   G   + ++FLVGTSFVHY RYI TY+HR  ++ +  FK D L FK +A++ + +HY  AL A   + A  E D+                V LA+I  G  +S   +  LGVDGTYFG ELG  + +  +V +FPY  +PHPMI+ Q+VA  G H L  FRAAWP+L+PAH   YL+ M+QE
Sbjct:  412 SNSDFRIVLKVHYCVYPKWALPFGLLLGWLSTRYNKAFRALFLFTINPKTPFEHFSAWNVVFWTKVVYAAEAYFGYNNALYISLLALLGWRFNYLIFLVGTSFVHYLRYINTYYHR-DNVAYTVFKRDVLIFKSLAVAQLCYHYAHALTAGF-TAAPGELDT----------------VGLAMIAGGYALSVYTTHQLGVDGTYFGIELGFVKKQKHFVQSFPYGVIPHPMILSQVVALLGFHKLAAFRAAWPYLVPAHVCLYLIHMVQE 663          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A6U2API0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2API0_HEMAN)

HSP 1 Score: 194 bits (494), Expect = 5.000e-54
Identity = 110/270 (40.74%), Postives = 158/270 (58.52%), Query Frame = 1
Query:    1 TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVT-ILYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMK--WVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            T+ D  ++L++HYC+YP+   P G+L   LST YN  FR+LFLFT+ P        A+ VV  T ++Y      G  N++Y+  L   G  V+ ++FLVGTSFVHY RYI TY+HR +++ +  FK D L FK +A++ + +HYV+AL +      +    +G                 LA++  G  +S   +  LGVDGTYFG ELG  + +  +V +FPY  +PHPMI+ Q+VA  G H L  FRAAWP+L+PAH   Y + M+QE
Sbjct:  412 TNKDFRIVLKVHYCIYPKWALPFGRLLGWLSTRYNKAFRALFLFTINPKTPFEHFSAWNVVFWTKVVYAIEAYFGYNNVVYIGGLALLGWRVNYLIFLVGTSFVHYLRYINTYYHR-TNVAYTVFKRDVLIFKSLAVAQILYHYVSALTSGFTVTPQELDVAG-----------------LAMVAGGYALSVYTTHQLGVDGTYFGIELGFVKKQKHFVQSFPYGVIPHPMILSQMVALLGFHKLDAFRAAWPYLVPAHICLYFIHMMQE 663          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A061S3V0_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S3V0_9CHLO)

HSP 1 Score: 186 bits (472), Expect = 7.600e-52
Identity = 116/270 (42.96%), Postives = 159/270 (58.89%), Query Frame = 1
Query:    4 DTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVT-ILYRAAIETGLQNILYVAVLFAAGRLVHPV--VFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSC-VPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            +T   + L+ HY VYPRVL P G+L   L+T YN+  R+LFL T+    ++SR+ A+LV+  T  ++      G  N+LYVA L AA RL+ P   VFLVGTSFVHY  Y++ +F+R   L  G F  +A+FFK +A+  +A  Y+ +           E D                 VS AL++AG  +S  A+ A+G+D TYFG E+G+ + KW++AFPYS  +PHPMIVG +V   G H L   RAA+PWL+PAH AFY    LQE
Sbjct:  270 NTGHRITLKNHYLVYPRVLRPYGRLLGRLTTAYNVAARNLFLSTIKTETLASRLGAWLVLGGTQAMFLTQQYVGFPNLLYVACLAAADRLLLPGRNVFLVGTSFVHYCMYMS-HFYRRYGLAHGTFVRNAVFFKCLAVGQLALMYLRSF----------EPDP----------------VSAALLVAGYGLSASAAAAIGIDRTYFGSEMGIYKPKWISAFPYSLGIPHPMIVGSVVGLLGFHKLAGVRAAYPWLVPAHVAFYAAHCLQE 512          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A6U4GRG3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GRG3_9STRA)

HSP 1 Score: 174 bits (440), Expect = 4.180e-50
Identity = 106/243 (43.62%), Postives = 142/243 (58.44%), Query Frame = 1
Query:   88 LSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTILYRAA-IETGLQNILYVAVLFAAGRLVHPV----VFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            L+ GYN+LFR+LFL T++P  + S++ AF VV+VT L  A  +  G  N LYV    AA    H      VFL  TS++HY RYI TY++RG ++++G FK D LF+K +A++ +   Y   LL        +                    VS+A++IAG  VS LA++ALG++GTYFG ELG CE  W+ AFPY  VPHPMI GQL A AG+ +   F AA+PWL P H   Y + M QE
Sbjct:    2 LNVGYNMLFRALFLATISPDSIVSKIGAFFVVHVTELVNAMWLYVGPHNALYVV---AAAVCAHTFRDYRVFLAATSYLHYFRYIGTYYYRG-EVNYGNFKRDVLFYKTIAVTQLVGLY---LLNFFDEPVSLPAF-----------------VSIAMMIAGYAVSALATKALGMNGTYFGIELGRCEPVWIDAFPYGYVPHPMITGQLFAMAGMLVNTNFFAAFPWLAPIHMLMYTIHMFQE 220          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A096P773_OSTTA (Phospholipid methyltransferase n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P773_OSTTA)

HSP 1 Score: 180 bits (457), Expect = 5.370e-49
Identity = 107/268 (39.93%), Postives = 151/268 (56.34%), Query Frame = 1
Query:    1 TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTI-LYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            T+ DR + ++LHYCVYP+   P G+    LS  YN L R LFL T+ P+G+  R MAF+V+ VT   +  +   G+ NI  V  L+A G+ +HP  F   TS+ HY  YI TY H    ++FG FK + +F+K +AL+H+A  YV                           FD I   S+ +I+ G  +ST A+ ALG+D TYFG ELG  +  +V+ FPY+ VPHPMIVG ++   G+H +   R A P+ +P HC  YL+ M+QE
Sbjct:  327 TNPDRRITMKLHYCVYPKCFGPFGEGLLHLSVMYNTLARKLFLNTIHPTGIW-RFMAFMVLFVTRGAFLVSKYAGMNNIASVLALYAVGKYIHPFFFFAMTSYTHYCMYIATY-HVRDRINFGMFKRNVVFWKTLALTHLAVAYVKNF-----------------------QFDPI---SIIMIVCGYGLSTSAAVALGMDQTYFGVELGEVKPNFVSGFPYNVVPHPMIVGSMLGLLGIHKMDGLREALPYAVPMHCFMYLLHMIQE 566          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A7S0H705_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H705_9EUKA)

HSP 1 Score: 179 bits (454), Expect = 1.090e-48
Identity = 100/263 (38.02%), Postives = 151/263 (57.41%), Query Frame = 1
Query:   19 LLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTILY-RAAIETGLQNILYVAVLFAAGRLVH-PVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            + L++HY  YP++L P GKL   L+  YN+  R+LFL T+ P+ +++R  A  V+  T L  +     GL N+ YV +LF A  +   P +F +GTS++HY  Y+ T++ R  ++ FG FK D +F+K +AL+H+ ++Y+                           FD I   SLAL+  G  ++  A++ALG+D TYFG ELG C+ ++V++FPY+C+PHPMIVG  +   G H L   R   P+L+P H A YL  M QE
Sbjct:  356 ICLKIHYVTYPKILRPWGKLLKRLTVNYNLNARALFLATIEPNSLTARASALTVLGTTWLTEKVQTNMGLNNLFYVLILFLASTVSPIPYLFTIGTSYLHYIIYLATFYSR-REIAFGLFKRDVIFYKSIALTHILYYYLKNF-----------------------EFDVI---SLALLGVGYFIAIAATKALGIDKTYFGSELGHCKPEYVSSFPYNCIPHPMIVGACIGLLGFHKLNGLREEVPYLIPVHIALYLTHMCQE 591          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A1Y5ICG6_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5ICG6_OSTTA)

HSP 1 Score: 181 bits (459), Expect = 3.410e-48
Identity = 107/268 (39.93%), Postives = 151/268 (56.34%), Query Frame = 1
Query:    1 TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTI-LYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            T+ DR + ++LHYCVYP+   P G+    LS  YN L R LFL T+ P+G+  R MAF+V+ VT   +  +   G+ NI  V  L+A G+ +HP  F   TS+ HY  YI TY H    ++FG FK + +F+K +AL+H+A  YV                           FD I   S+ +I+ G  +ST A+ ALG+D TYFG ELG  +  +V+ FPY+ VPHPMIVG ++   G+H +   R A P+ +P HC  YL+ M+QE
Sbjct:  848 TNPDRRITMKLHYCVYPKCFGPFGEGLLHLSVMYNTLARKLFLNTIHPTGIW-RFMAFMVLFVTRGAFLVSKYAGMNNIASVLALYAVGKYIHPFFFFAMTSYTHYCMYIATY-HVRDRINFGMFKRNVVFWKTLALTHLAVAYVKNF-----------------------QFDPI---SIIMIVCGYGLSTSAAVALGMDQTYFGVELGEVKPNFVSGFPYNVVPHPMIVGSMIGLLGIHKMDGLREALPYAVPMHCFMYLLHMIQE 1087          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: L1JFK3_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JFK3_GUITC)

HSP 1 Score: 178 bits (452), Expect = 4.350e-48
Identity = 106/269 (39.41%), Postives = 148/269 (55.02%), Query Frame = 1
Query:    4 DTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVT-ILYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMK--WVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            + D  ++L++H+ +YP   WP GKL   LST YN LFRSLFL+T+ P G+ +R  A+ VV  T ++++   + G  NI Y+A L          VFLVGTSF+HY RYI TY+HR   + +G FK D   FK +++S +   Y +A+       +     S                +  A+I  G  +S   +  LGVDGTYFG ELG  +    +V  FPY  +PHPMI+ Q VA  G      FR++WP+L+PAH   Y+V MLQE
Sbjct:  399 NKDFRIVLKVHHVIYPSWAWPFGKLMGILSTRYNKLFRSLFLYTINPKGLFNRFAAWNVVFWTKVVHQIEEKVGYCNIGYIAALAVVSFFTTYKVFLVGTSFIHYLRYINTYYHR-EGVAYGVFKRDVFLFKALSISQLVLLYASAVTNNFTDLSLALKTSP---------------IDYAMIFGGYALSIYTTFQLGVDGTYFGIELGFVKASKHYVQKFPYGVIPHPMILSQCVAMLGFMRAEAFRSSWPYLVPAHVCLYMVHMLQE 651          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A0A7S3HBU4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBU4_9STRA)

HSP 1 Score: 175 bits (443), Expect = 7.490e-48
Identity = 105/264 (39.77%), Postives = 150/264 (56.82%), Query Frame = 1
Query:   19 LLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAFLVVNVTILYRAAIET--GLQNILYVAVLFAAGRLVHPV-VFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            ++L+LHYC+YPRVL PLG L  + +  YN+ FR+LFL T+ P  +    +A+ V   TIL+   IET  G +N+LY+  + A   +     +F   TS+VHY RYI+TY+ R   +DFG FK D L FK VAL+ + + Y                            FD I   S+A+I++G  VS +A+ A+G+D TYF  ELG+   KW+  FPY  +PHPMIV Q+ A  G++    +RA WP+++P H   Y+  MLQE
Sbjct:  245 VVLKLHYCIYPRVLAPLGWLMYSFNVTYNMSFRALFLKTINPQSLYEHFLAWNVNLNTILFDR-IETLLGQRNVLYLLFMLALWYVTGMYEIFFAFTSYVHYFRYISTYYVR-KGIDFGSFKRDVLLFKSVALAQLFYPYFFPTTRPF-------------------EFDPI---SIAMIVSGYAVSVMATNAIGIDRTYFAAELGLVPHKWIDQFPYGYIPHPMIVSQVFALLGLYKAAHYRAEWPYVVPVHVLLYVTHMLQE 484          
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Match: A9V7R1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7R1_MONBE)

HSP 1 Score: 171 bits (434), Expect = 7.560e-46
Identity = 109/271 (40.22%), Postives = 150/271 (55.35%), Query Frame = 1
Query:   13 RPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSGVSSRVMAF-LVVNVTILYRAAIE-TGLQNILYVAVLFAAGRLVHP------VVFLVGTSFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLATLGSKAEVEGDSGXXXXXXXXXFDAILAVSLALIIAGSTVSTLASRALGVDGTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWPWLMPAHCAFYLVVMLQE 801
            R ++L++HYCVYPR L PLGKL    +  YN+ FR+LFL T+ P      +++  +VV +T L  A     G  N LY+ VL     L  P       +FL GT+++HY RYI T++ R  +++F  FK D L FK V+L+ + + Y+A L            D                 +SL+LI  G T+S LA++ALG+D TYFG ELG CE KW+TAFPY  +PHPMIV Q++A AG   L   R  + WL+  H   Y   M+QE
Sbjct:  331 RRVVLKIHYCVYPRQLLPLGKLLHLANVLYNMCFRALFLATIKPPETPLEILSGQVVVQMTRLVNAFQRFVGFPNALYLGVL---AYLASPYGLNCYTLFLAGTAWIHYLRYIATFYWR-RNINFEAFKRDVLLFKSVSLAQLGFLYLARL------------DLAHPDW-----------LSLSLIATGYTLSILATKALGIDRTYFGVELGFCEPKWITAFPYGTIPHPMIVSQMLALAGFLKLAALRQDYAWLIAGHIGLYFCHMVQE 574          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1525.3707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0Z2X0_9CRYP1.860e-5442.96Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A6U2API0_HEMAN5.000e-5440.74Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A061S3V0_9CHLO7.600e-5242.96Uncharacterized protein (Fragment) n=1 Tax=Tetrase... [more]
A0A6U4GRG3_9STRA4.180e-5043.62Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A096P773_OSTTA5.370e-4939.93Phospholipid methyltransferase n=1 Tax=Ostreococcu... [more]
A0A7S0H705_9EUKA1.090e-4838.02Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A1Y5ICG6_OSTTA3.410e-4839.93Uncharacterized protein n=1 Tax=Ostreococcus tauri... [more]
L1JFK3_GUITC4.350e-4839.41Uncharacterized protein n=2 Tax=Geminigeraceae Tax... [more]
A0A7S3HBU4_9STRA7.490e-4839.77Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A9V7R1_MONBE7.560e-4640.22Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1525contigE-fasciculatus_F_contig1525:888..2330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.4
Seed ortholog evalue1.7e-47
Seed eggNOG ortholog296587.XP_002508210.1
EggNOG free text desc.Phospholipid methyltransferase
EggNOG OGs28Q2P@1,2QWRE@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size801
Cds size801
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928006.132377-CDS-E-fasciculatus_F_contig1525:887..10731622928006.132377-CDS-E-fasciculatus_F_contig1525:887..1073Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1525 888..1073 +
1695995785.4804132-CDS-E-fasciculatus_F_contig1525:887..10731695995785.4804132-CDS-E-fasciculatus_F_contig1525:887..1073Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1525 888..1073 +
1622928006.1485865-CDS-E-fasciculatus_F_contig1525:1715..23301622928006.1485865-CDS-E-fasciculatus_F_contig1525:1715..2330Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1525 1716..2330 +
1695995785.4916592-CDS-E-fasciculatus_F_contig1525:1715..23301695995785.4916592-CDS-E-fasciculatus_F_contig1525:1715..2330Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1525 1716..2330 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1525.3707.1prot_E-fasciculatus_F_contig1525.3707.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1525 888..2330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1525.3707.1

>prot_E-fasciculatus_F_contig1525.3707.1 ID=prot_E-fasciculatus_F_contig1525.3707.1|Name=mRNA_E-fasciculatus_F_contig1525.3707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=267bp
TDTDRPLLLQLHYCVYPRVLWPLGKLAAALSTGYNILFRSLFLFTLTPSG
VSSRVMAFLVVNVTILYRAAIETGLQNILYVAVLFAAGRLVHPVVFLVGT
SFVHYPRYITTYFHRGSDLDFGRFKLDALFFKVVALSHVAWHYVAALLAT
LGSKAEVEGDSGGGGGGGGGGFDAILAVSLALIIAGSTVSTLASRALGVD
GTYFGPELGVCEMKWVTAFPYSCVPHPMIVGQLVAFAGVHLLPEFRAAWP
WLMPAHCAFYLVVMLQE
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mRNA from alignment at E-fasciculatus_F_contig1525:888..2330+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1525.3707.1 ID=mRNA_E-fasciculatus_F_contig1525.3707.1|Name=mRNA_E-fasciculatus_F_contig1525.3707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1443bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1525:888..2330+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCGACACCGACCGCCCCTTGCTCCTCCAGCTGCACTACTGCGTCTACCC CCGCGTCCTGTGGCCTCTCGGCAAGCTGGCGGCGGCCCTGTCGACGGGCT ACAACATTCTCTTCCGCAGCCTTTTTCTTTTCACCCTCACGCCGTCCGGG GTCTCGAGCCGTGTCATGGCGTTCCTCGTCGTTAATGTGAGCATTTCTTG CAAGCGTCGCCCGAGTTTTTGGTGGCTCGGACGTGTCGTGGTAATGTTGT CCCGCTTCCTGCCGCGAGGACTGCGGGTGAATATCTCGCCTGGTCGCAGA GAGTTACTGCAGGCTTGTGCGCAGACAGCAGAGGAGATTATCGAGGTTCT CTTTGTTACCGCGGGTTGATCCTGCCGCGCTTTTCGCGATATAAAAAAAG CACGAGCGTGCGTGCTTCTTTCTTTCTGTCGAGCCTCTGAAGGACACCGA AATTTTTTCTCGTTGTTGTTGAAAATACCGAACCTCAACCCTTGTAGACC GTCTAAAGAAAGCACTTCATGGTATTGGCAAGCCATCTCGGGACCACCCT CTGGTCTCGAGATTAACCCGTGAGAGAGAGGCAGAGGCCATGACTACGTA TATGCGTATTTATCCCCGAAAAGGTGTTCCTCTTCGCGGCGGGGGCGGTG GTCTATGCTACTGGTGAAGGCCCCGGCGTACATACCAAGTATCCTGTTAT GACTGCCAGCATTGTGCAACGGATGCTTCCATGATTTCCTCCCCGGTGTA CCGAAGTTCCCGGTTGGCGTACGTTGCTCTGTTGCCCGGTCTCCGTTTGT GTGTGCTGCCCTCGCCCCCTCAACACAGGTAACAATCCTCTACCGCGCGG CCATCGAAACTGGCCTCCAGAATATCCTTTACGTGGCGGTTCTGTTCGCC GCCGGGAGGCTGGTTCACCCGGTCGTCTTCCTCGTGGGGACCTCGTTCGT GCACTACCCGCGCTACATCACCACCTACTTCCACCGCGGCAGCGACCTGG ACTTCGGGAGGTTCAAGCTGGACGCCTTGTTCTTCAAGGTCGTAGCCCTC TCGCACGTCGCCTGGCACTACGTCGCGGCCCTCCTTGCAACCTTGGGCTC GAAGGCGGAAGTAGAAGGCGACAGCGGCGGCGGCGGCGGCGGCGGCGGCG GCGGCTTCGACGCCATCTTAGCTGTGTCTTTGGCGCTGATCATCGCCGGC TCTACCGTCTCGACCCTGGCCAGCAGAGCCCTCGGCGTGGACGGCACGTA CTTTGGGCCGGAGCTTGGGGTCTGCGAGATGAAGTGGGTGACCGCCTTTC CGTACAGCTGCGTGCCCCACCCCATGATCGTCGGCCAGCTGGTCGCCTTC GCGGGGGTCCACCTGCTGCCCGAGTTCCGCGCCGCGTGGCCGTGGCTCAT GCCCGCTCACTGCGCGTTCTACCTGGTGGTGATGCTGCAGGAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1525:888..2330+

>mRNA_E-fasciculatus_F_contig1525.3707.1 ID=mRNA_E-fasciculatus_F_contig1525.3707.1|Name=mRNA_E-fasciculatus_F_contig1525.3707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1602bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1525:888..2330+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCGACACCGACCGCCCCTTGCTCCTCCAGCTGCACTACTGCGTCTACCC
CCGCGTCCTGTGGCCTCTCGGCAAGCTGGCGGCGGCCCTGTCGACGGGCT
ACAACATTCTCTTCCGCAGCCTTTTTCTTTTCACCCTCACGCCGTCCGGG
GTCTCGAGCCGTGTCATGGCGTTCCTCGTCGTTAATACCGACACCGACCG
CCCCTTGCTCCTCCAGCTGCACTACTGCGTCTACCCCCGCGTCCTGTGGC
CTCTCGGCAAGCTGGCGGCGGCCCTGTCGACGGGCTACAACATTCTCTTC
CGCAGCCTTTTTCTTTTCACCCTCACGCCGTCCGGGGTCTCGAGCCGTGT
CATGGCGTTCCTCGTCGTTAATGTAACAATCCTCTACCGCGCGGCCATCG
AAACTGGCCTCCAGAATATCCTTTACGTGGCGGTTCTGTTCGCCGCCGGG
AGGCTGGTTCACCCGGTCGTCTTCCTCGTGGGGACCTCGTTCGTGCACTA
CCCGCGCTACATCACCACCTACTTCCACCGCGGCAGCGACCTGGACTTCG
GGAGGTTCAAGCTGGACGCCTTGTTCTTCAAGGTCGTAGCCCTCTCGCAC
GTCGCCTGGCACTACGTCGCGGCCCTCCTTGCAACCTTGGGCTCGAAGGC
GGAAGTAGAAGGCGACAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCT
TCGACGCCATCTTAGCTGTGTCTTTGGCGCTGATCATCGCCGGCTCTACC
GTCTCGACCCTGGCCAGCAGAGCCCTCGGCGTGGACGGCACGTACTTTGG
GCCGGAGCTTGGGGTCTGCGAGATGAAGTGGGTGACCGCCTTTCCGTACA
GCTGCGTGCCCCACCCCATGATCGTCGGCCAGCTGGTCGCCTTCGCGGGG
GTCCACCTGCTGCCCGAGTTCCGCGCCGCGTGGCCGTGGCTCATGCCCGC
TCACTGCGCGTTCTACCTGGTGGTGATGCTGCAGGAAGTAACAATCCTCT
ACCGCGCGGCCATCGAAACTGGCCTCCAGAATATCCTTTACGTGGCGGTT
CTGTTCGCCGCCGGGAGGCTGGTTCACCCGGTCGTCTTCCTCGTGGGGAC
CTCGTTCGTGCACTACCCGCGCTACATCACCACCTACTTCCACCGCGGCA
GCGACCTGGACTTCGGGAGGTTCAAGCTGGACGCCTTGTTCTTCAAGGTC
GTAGCCCTCTCGCACGTCGCCTGGCACTACGTCGCGGCCCTCCTTGCAAC
CTTGGGCTCGAAGGCGGAAGTAGAAGGCGACAGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGGCTTCGACGCCATCTTAGCTGTGTCTTTGGCGCTGATC
ATCGCCGGCTCTACCGTCTCGACCCTGGCCAGCAGAGCCCTCGGCGTGGA
CGGCACGTACTTTGGGCCGGAGCTTGGGGTCTGCGAGATGAAGTGGGTGA
CCGCCTTTCCGTACAGCTGCGTGCCCCACCCCATGATCGTCGGCCAGCTG
GTCGCCTTCGCGGGGGTCCACCTGCTGCCCGAGTTCCGCGCCGCGTGGCC
GTGGCTCATGCCCGCTCACTGCGCGTTCTACCTGGTGGTGATGCTGCAGG
AA
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