mRNA_E-fasciculatus_F_contig15247.3705.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: D7G9C4_ECTSI (MIP family channel protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9C4_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.920e-49 Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 1
Query: 25 MMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVYGL 300
M IVI+VGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAML+AKAFLGRLAWKDALALSVAN+LGGFLGGVVVYGL
Sbjct: 1 MAIVIAVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLVAKAFLGRLAWKDALALSVANILGGFLGGVVVYGL 92
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: A0A1S8VP22_9FUNG (Aquaporin n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VP22_9FUNG) HSP 1 Score: 99.4 bits (246), Expect = 3.030e-22 Identity = 49/98 (50.00%), Postives = 70/98 (71.43%), Query Frame = 1
Query: 1 RFISETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVY 294
R ++E LG + I +G IANE+L TKGH++G G+VA +FGM+F +AI MFG SA++NP+M LA +GRL++ D LALS A + GGF+G V ++
Sbjct: 12 RCLTEFLGTTLAIFLGTSVIANELLPLTKGHSMGFGWVATSFGMSFGVAIMMFGFASAHLNPSMTLALFIIGRLSFTDFLALSCAQLAGGFVGAVAMF 109
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: F4NWJ9_BATDJ (Aquaporin n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NWJ9_BATDJ) HSP 1 Score: 95.9 bits (237), Expect = 5.410e-21 Identity = 45/98 (45.92%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 1 RFISETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVY 294
R ++E LG + I +G+ IANE+L TKGH++G G++A AFGMAF L+I MFG+ SA+VNPAM L + +L++ D + L ++ + GGF+G V ++
Sbjct: 12 RCLTEFLGTALAIFLGDSVIANELLPLTKGHSMGFGWIATAFGMAFTLSILMFGYASAHVNPAMTLTLFIINKLSFVDCICLILSQLAGGFMGAVAMF 109
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: A0A836C7L0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7L0_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 3.310e-20 Identity = 39/68 (57.35%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 RFISETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAK 204
+FI+E L M + I++GNG ANEVL +TKG+++G+GFVAIA+G+AFF+A +MFGHIS NPA + A+
Sbjct: 8 KFIAELLSMTVYIAIGNGCTANEVLPRTKGNSMGMGFVAIAYGLAFFIATAMFGHISTVPNPAFVFAQ 75
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: A0A1C4GZU5_9BIFI (Glycerol uptake facilitator protein n=1 Tax=Bifidobacterium commune TaxID=1505727 RepID=A0A1C4GZU5_9BIFI) HSP 1 Score: 87.4 bits (215), Expect = 6.040e-19 Identity = 43/99 (43.43%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 1 RFISETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHIS-ANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVY 294
+ +E LG MI++ +GNG++AN LK TKGHA G +A+ +GM + + MFG +S +++NPAM LA+AF G W L VA +LG F+G ++V+
Sbjct: 8 KLAAEFLGTMILLILGNGSVANTDLKGTKGHASGWLNIALGYGMGVMVPVMMFGGVSGSHINPAMTLAQAFTGLFPWSQVLPYIVAQLLGAFVGQLIVF 106
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: A0A087SQB7_AUXPR (Putative glycerol uptake facilitator protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SQB7_AUXPR) HSP 1 Score: 87.8 bits (216), Expect = 3.420e-18 Identity = 43/95 (45.26%), Postives = 64/95 (67.37%), Query Frame = 1
Query: 10 SETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVY 294
+E +G M+ + +G+ A+ANE+L KTKG+ G GF+AI FG+AF MFGHISA +NPA L + G L+ + LALS + + G FLG ++++
Sbjct: 20 AEVIGTMLALFLGDAAVANELLAKTKGNGYGWGFLAIGFGLAFGFPTMMFGHISAFLNPAACLFQWVAGNLSVTEFLALSFSELAGAFLGAILLW 114
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: A0A250WPL5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPL5_9CHLO) HSP 1 Score: 87.0 bits (214), Expect = 7.910e-18 Identity = 39/98 (39.80%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 1 RFISETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVY 294
+ ++E LG MI I +G IA+ +L K+KG ++G G++++ +G+AFF+ FGH+SAN+NPA+ +A +G+ + + LALS + ++G FLG V +
Sbjct: 62 KCLTELLGTMIGIYLGCSVIASAILPKSKGQSMGFGWISLGYGLAFFVPGVFFGHVSANLNPAICIADLVMGKSTFLEFLALSASEIVGAFLGAVCTW 159
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: A0A0L0FCN1_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCN1_9EUKA) HSP 1 Score: 84.0 bits (206), Expect = 2.450e-17 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 10 SETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVY 294
SE + MM+ I +G +A E+L K+KG +G+ VAI FG+AF++ I MFGHISA +NP M+ AK G+ + L LS+A+ +G F G +V+
Sbjct: 11 SEGIAMMVAIWLGESLLACELLAKSKGAHMGITGVAIGFGIAFYIPIQMFGHISATLNPCMMFAKWICGKKTTEAWLLLSLADFIGAFCGACIVW 105
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: M1H9L8_9PHYC (Glycerol uptake facilitator protein n=1 Tax=Acanthocystis turfacea Chlorella virus MN0810.1 TaxID=1278272 RepID=M1H9L8_9PHYC) HSP 1 Score: 83.2 bits (204), Expect = 3.830e-17 Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 RFISETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVY 294
+F +E + + +G +AN+ L TKGH +G GF+A FGMAF + I +FG +SA++NPAM +A LG++ K+AL +LG FLG ++VY
Sbjct: 8 KFGTEACSSFLAMLLGLSVVANDHLLLTKGHKIGFGFIAFGFGMAFAMPIIIFGFVSAHLNPAMCVALLVLGKVDAKEALVSIGGELLGMFLGAIMVY 105
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Match: M1GXH3_9PHYC (Glycerol uptake facilitator protein n=1 Tax=Acanthocystis turfacea Chlorella virus Canal-1 TaxID=1278270 RepID=M1GXH3_9PHYC) HSP 1 Score: 83.6 bits (205), Expect = 6.390e-17 Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 RFISETLGMMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISANVNPAMLLAKAFLGRLAWKDALALSVANVLGGFLGGVVVY 294
+F +E + + G +AN+ L KTKGH +G GF+A FGMAF + + +FG +SA++NPAM +A LG++ K+A ++G FLG V+VY
Sbjct: 82 KFGTEACSSFLAMLFGLSIVANDHLLKTKGHKIGFGFIAFGFGMAFAIPLVIFGFVSAHLNPAMCIALLLLGKVDAKEAFVSIGGEIIGMFLGAVMVY 179 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15247.3705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15247.3705.1 >prot_E-fasciculatus_F_contig15247.3705.1 ID=prot_E-fasciculatus_F_contig15247.3705.1|Name=mRNA_E-fasciculatus_F_contig15247.3705.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=93bp MMIVISVGNGAIANEVLKKTKGHALGLGFVAIAFGMAFFLAISMFGHISAback to top mRNA from alignment at E-fasciculatus_F_contig15247:386..960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15247.3705.1 ID=mRNA_E-fasciculatus_F_contig15247.3705.1|Name=mRNA_E-fasciculatus_F_contig15247.3705.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=575bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15247:386..960+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15247:386..960+ >mRNA_E-fasciculatus_F_contig15247.3705.1 ID=mRNA_E-fasciculatus_F_contig15247.3705.1|Name=mRNA_E-fasciculatus_F_contig15247.3705.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=558bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15247:386..960+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |