mRNA_E-fasciculatus_F_contig1524.3701.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: D7FRQ6_ECTSI (Putative methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ6_ECTSI) HSP 1 Score: 628 bits (1619), Expect = 7.200e-221 Identity = 336/399 (84.21%), Postives = 356/399 (89.22%), Query Frame = 1
Query: 310 TRYTIDVDVHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAINGEAQTTKGEGDSAADEGGVGDLESKRTSSGGKDGDGKVAGMRAAVVSSVVSGRRLTPSTTLSATESDDKAGTTGGDVSFSIGRALIGDENRAQVPATVAAAAASYAASARAGPFTFVPAVPAATNFEGKYAAVGETVYELRLEPKVS 1506
TRYTIDVDVHPD ASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVL FHRS P+EQQQRS LPVVLDSGCGTGRSS LLARS PHLPVIGIDRSAVRL+KGGG A K VE H+H+ +SSTRQAGA QG ++RVDAR AHGSSGEK P Q+KGNR NR REPLPENLLLLRADLVDLWILASR+NAWEIKEH+ILYPNPYPKRSQLRSRWHGHSVFPV+LSLGGVITLRSNW+ YLDEVCQAVLAING AQTT+GEGDSAADEGG+GDLESKRTSSGGKDG G+V+G AAV S+ VS T LSATESDD A TTGGDVSF IGRALIGDE+RA+VPATVAAAA SYAASARAGP TFVPAVPAATNFE KY AVGETVYELRLEPK+S
Sbjct: 2 TRYTIDVDVHPDAASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLAFHRS--PQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRVEEHMHQHNSSTRQAGAEQGRNDRVDARRAHGSSGEKNRPPLQKKGNRDNRLREPLPENLLLLRADLVDLWILASRENAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTTEGEGDSAADEGGLGDLESKRTSSGGKDGAGEVSGTDAAVASAAVS-------TKLSATESDDSAETTGGDVSFGIGRALIGDESRAEVPATVAAAAVSYAASARAGPLTFVPAVPAATNFEAKYVAVGETVYELRLEPKLS 391
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: A0A8J5XCC6_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCC6_DIALT) HSP 1 Score: 145 bits (365), Expect = 2.390e-35 Identity = 89/242 (36.78%), Postives = 125/242 (51.65%), Query Frame = 1
Query: 337 HPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAI 1062
H A+VA KH L+L FLH+ P HT+A + ++ E H + +R + ++LDSGCGTGRS+ LLA+ +P VIG+DRS RL K +RD S A A +G + V +P +N LL+RADL W LA ++ W ++ H +L+PNPYPK + L RWH H +P++L+LGG + LRSNW+ YL+E A AI
Sbjct: 30 HARTAAVACKHVLELDSFLHNAPTPEHTRATFGATAAWLAERHGA-------RRGAGGLLLDSGCGTGRSTLLLAQQHPDCLVIGVDRSLARLRK-------------DKRDISPGAACAPRGDEGPV----------------------------QPAFDNALLVRADLPAFWRLAV-ESGWRLRAHRLLFPNPYPKPAHLPRRWHAHPSWPLVLALGGELELRSNWRTYLEETVIATSAI 222
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: A0A0B4XNW9_9GAMM (Methyltransferase n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A0B4XNW9_9GAMM) HSP 1 Score: 140 bits (354), Expect = 1.430e-34 Identity = 90/244 (36.89%), Postives = 118/244 (48.36%), Query Frame = 1
Query: 337 HPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAING 1068
H +A+V V+H R P+++HT+AA+ A D+ Q + P+VLDSGCGTGRSS LA P VIG+D+S RL +G HL R +PLP NLLLLRA+ D W LA + W ++EH + YPNP+PK + LR RWHGH VFPV+L LGG + LRSNW YL+E+ + LA+ G
Sbjct: 16 HEQLAAVVVRHLAHPWRA----PVAAHTRAAFAEAADW-----------RAAQGADRPLVLDSGCGTGRSSVWLAGHYPEALVIGLDQSGERLRRG---------------------------------------------HL-----------RFDPLPANLLLLRAEAADFWRLAV-EAGWRVREHCLFYPNPWPKSAHLRRRWHGHPVFPVLLQLGGQLRLRSNWPVYLEEM-RLALALAG 186
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: UPI000DBA2FDA (methyltransferase domain-containing protein n=1 Tax=Alcanivorax indicus TaxID=2202653 RepID=UPI000DBA2FDA) HSP 1 Score: 139 bits (351), Expect = 2.900e-34 Identity = 89/245 (36.33%), Postives = 123/245 (50.20%), Query Frame = 1
Query: 334 VHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAING 1068
+H D+ V +H R P+++HT+AA+ A ++R+ SP P++LDSGCGTGRSS LLA+ +P VIG+D+SA RLA+ G G P+NLLLLRA+ D W LA + W+++ H++LYPNP+PK + L+ RWHGH VFP +L+LGG +TLRSNW YL E+ QA LA+ G
Sbjct: 15 IHEDLERVVKRHLSSAWRA----PVAAHTRAAFAEAD----AWYRA-SP-------GAPLILDSGCGTGRSSRLLAQRHPEARVIGLDQSAHRLARSGSG------------------------------------------------------------PDNLLLLRAECADFWRLAE-EAGWQLEAHYLLYPNPWPKAAHLKRRWHGHPVFPTMLALGGRLTLRSNWGLYLQEM-QAALALAG 181
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: A0A1H5TDG6_9GAMM (tRNA G46 methylase TrmB n=3 Tax=Alcanivorax TaxID=59753 RepID=A0A1H5TDG6_9GAMM) HSP 1 Score: 139 bits (351), Expect = 3.150e-34 Identity = 92/250 (36.80%), Postives = 118/250 (47.20%), Query Frame = 1
Query: 319 TIDVDVHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAING 1068
T +H D+ V +H LQ P PI+ H A+R + Q S P++LDSGCGTGRSS LA NP+ V+G+D+SAVRL +R RR E LP+NLLLLRAD LW L + + W++ H ILYPNP+PK + L+ RWHGH V+P +LSLGG + +RSNW YL EV QA L I+G
Sbjct: 10 TNQTSIHDDLDRVVRRH-LQHPW---RAPIADHDVQAFRRLQQW-----------RDAQGSERPLMLDSGCGTGRSSRALASQNPNALVVGVDQSAVRL--------------------------------------------------------DRATRRFETLPDNLLLLRADCAGLWRLMAGEG-WQLHRHQILYPNPWPKSAHLKRRWHGHPVWPTLLSLGGELEMRSNWPLYLQEV-QAALQISG 186
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: A0A3D9DW02_9GAMM (tRNA G46 methylase TrmB n=1 Tax=Kushneria indalinina DSM 14324 TaxID=1122140 RepID=A0A3D9DW02_9GAMM) HSP 1 Score: 139 bits (351), Expect = 4.150e-34 Identity = 94/247 (38.06%), Postives = 120/247 (48.58%), Query Frame = 1
Query: 334 VHPDVASVAVKHAL--QLPRFLHHYPISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAING 1068
+HPD+A V+ AL Q R PI+ HT AA+ A F Q P++LD+GCGTGRS+ LAR +P V+GIDRSA RL++ TR+ GA P+N LL+RADLVD W LA W+ H +LYPNPYPK SQL+ RWH H VFPV+++LGGV+TLRSNW+ Y+DE A+ G
Sbjct: 15 LHPDLAH-HVQRALDSQWQR-----PIADHTCAAFETAQQFY-------------QAHGGPLILDAGCGTGRSTRQLARYHPEACVLGIDRSADRLSR-----------------DYTRELGA--------------------------------------FPDNALLVRADLVDFWRLAY-SAGWQPVRHFLLYPNPYPKASQLKRRWHAHPVFPVVMALGGVLTLRSNWQVYVDEFACAINLATG 186
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: A0A845MMI4_9GAMM (Methyltransferase domain-containing protein n=1 Tax=Alcanivorax sp. DP30 TaxID=2606217 RepID=A0A845MMI4_9GAMM) HSP 1 Score: 138 bits (348), Expect = 8.220e-34 Identity = 89/245 (36.33%), Postives = 115/245 (46.94%), Query Frame = 1
Query: 334 VHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAING 1068
VH D+ V V+H + P + H + A+ A + +Q S P++LDSGCGTGRSS LAR+NP VIG D+SA RL K RR PLP+NLLLLR+D LW L + W++ H ILYPNP+PK + L+ RWHGH V+P +L+LGG + LRSNW YL EV QA LA++G
Sbjct: 15 VHTDLEKVVVRHLANPWQA----PFADHDREAFAQASQW-----------RAKQGSERPLMLDSGCGTGRSSVHLARANPQALVIGADQSADRLTK--------------------------------------------------------AQRRFAPLPDNLLLLRSDCAGLWRLMV-EAGWQLARHQILYPNPWPKSAHLKRRWHGHPVWPAVLALGGELELRSNWPIYLQEV-QAALALSG 186
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: UPI001CBC5452 (SAM-dependent methyltransferase n=1 Tax=Alcanivorax limicola TaxID=2874102 RepID=UPI001CBC5452) HSP 1 Score: 137 bits (346), Expect = 1.550e-33 Identity = 83/218 (38.07%), Postives = 108/218 (49.54%), Query Frame = 1
Query: 403 PISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVL 1056
P++ HT+AA+ A+ ++ E R PV+LDSGCGT RSS LA +P VIGID+SA RLA+G R AGA LP+NLLLLRA+ D W LA + W + H++LYPNP+PK + L+ RWHGH VFP +L+LGG + +RSNW YL E+ QA L
Sbjct: 34 PVAEHTRAAFAEALAWLAE------------RQDAPVILDSGCGTARSSRWLAAQHPGAAVIGIDQSAHRLARG-------------------RDAGA--------------------------------------LPDNLLLLRAECADFWRLAE-EGGWRLMAHYLLYPNPWPKAAHLKRRWHGHPVFPSLLNLGGTLEVRSNWPIYLQEM-QAAL 180
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: A0A095TU16_9GAMM (Methyltransferase n=1 Tax=Alcanivorax nanhaiticus TaxID=1177154 RepID=A0A095TU16_9GAMM) HSP 1 Score: 136 bits (343), Expect = 4.150e-33 Identity = 80/208 (38.46%), Postives = 103/208 (49.52%), Query Frame = 1
Query: 442 VDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAIN 1065
DF E Q++ LP++LDSGCGTGRSS LA +NP + VIG+D+SA RLAK RR PLPENLLLLR+D LW L + W++ H ILYPNP+PK + L+ RWHGH V+P +L+LGG + LRSNW YL+EV + LA++
Sbjct: 36 ADFDREAFELARRWRQERGEQLPLMLDSGCGTGRSSVHLALANPEVLVIGVDQSADRLAK--------------------------------------------------------ARRRFSPLPENLLLLRSDCAGLWRLMV-EAGWQLARHQILYPNPWPKSAHLKRRWHGHPVWPAVLALGGELELRSNWPVYLEEV-KVALALS 185
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Match: UPI001679E76A (class I SAM-dependent methyltransferase n=1 Tax=Kushneria pakistanensis TaxID=1508770 RepID=UPI001679E76A) HSP 1 Score: 137 bits (344), Expect = 4.650e-33 Identity = 92/252 (36.51%), Postives = 119/252 (47.22%), Query Frame = 1
Query: 316 YTIDVDVHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLEFHRSNSPEEQQQRSSLPVVLDSGCGTGRSSALLARSNPHLPVIGIDRSAVRLAKGGGGAEKEVEAHIHERDSSTRQAGAGQGSDNRVDARSAHGSSGEKKHLPSQRKGNRGNRRREPLPENLLLLRADLVDLWILASRDNAWEIKEHHILYPNPYPKRSQLRSRWHGHSVFPVILSLGGVITLRSNWKAYLDEVCQAVLAINGE 1071
Y+ +HPD+A V+ AL P PI+ HT+AA+ A F Q P++LD+GCGTGRS+ LAR P V+GIDRSA RL++ TR+ GA P+N LLRADL+D W LA W+ H I YPNPYPK SQL+ RWH H VFPV+L+LGG + LRSNW+ Y++E AV + G+
Sbjct: 9 YSTQAGLHPDLAH-HVQRALDHPW---QRPIADHTRAAFETAQQFY-------------QAHGGPLILDAGCGTGRSTRQLARYYPKACVLGIDRSADRLSR-----------------DYTRELGA--------------------------------------FPDNARLLRADLIDFWRLAHAAG-WQPIRHCIFYPNPYPKASQLKKRWHAHPVFPVLLALGGELELRSNWQIYVEEFACAVDLVTGQ 187 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1524.3701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1524.3701.1 >prot_E-fasciculatus_F_contig1524.3701.1 ID=prot_E-fasciculatus_F_contig1524.3701.1|Name=mRNA_E-fasciculatus_F_contig1524.3701.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=426bp MTAGSAQERYGAPTTTTPVSPSTAGTTRYTIDVDVHPDVASVAVKHALQLback to top mRNA from alignment at E-fasciculatus_F_contig1524:7969..9862+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1524.3701.1 ID=mRNA_E-fasciculatus_F_contig1524.3701.1|Name=mRNA_E-fasciculatus_F_contig1524.3701.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1894bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1524:7969..9862+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1524:7969..9862+ >mRNA_E-fasciculatus_F_contig1524.3701.1 ID=mRNA_E-fasciculatus_F_contig1524.3701.1|Name=mRNA_E-fasciculatus_F_contig1524.3701.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2556bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1524:7969..9862+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |