prot_E-fasciculatus_F_contig15223.3694.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15223.3694.1
Unique Nameprot_E-fasciculatus_F_contig15223.3694.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length116
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15223.3694.1 vs. uniprot
Match: A0A6H5KLT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT6_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 4.980e-15
Identity = 81/117 (69.23%), Postives = 86/117 (73.50%), Query Frame = 0 
Query:    1 MRLLRWRCALLIATLAASNLVSPANSQESSVTSAGDDVED---STEXXXXXXPAVAEIDPSDXXXXXXXXPVXXXXXXXXXXXXLAAVEXXXDT--PAADEAVEXXXXSXEEEDAPE 112
            MRLLRWRCALLIATLAASNLVSPANSQ+SS TSAGDDVED   S +      PAVAEID SDXXXXXXXX  XXXXXXXXXX X   VE   DT  P  +E+V+    S  EEDAPE
Sbjct:    1 MRLLRWRCALLIATLAASNLVSPANSQDSSPTSAGDDVEDTGSSLDPAPEPTPAVAEIDASDXXXXXXXX-XXXXXXXXXXXPXXXXVEEEQDTLAPVENESVDTPAPSAAEEDAPE 116
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BLAST of mRNA_E-fasciculatus_F_contig15223.3694.1 vs. uniprot
Match: D8LB64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB64_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.270e-14
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 0 
Query:    1 MRLLRWRCALLIATLAASNLVSPANSQESSVTSAGDDVED---STEXXXXXXPAVAEIDPSD 59
            MRLLRWRCALLIATLAASN+VSPANSQ+SS+TSAGDDVED   S++  XXXX AVAEIDPSD
Sbjct:    1 MRLLRWRCALLIATLAASNVVSPANSQDSSLTSAGDDVEDTSSSSDPAXXXXXAVAEIDPSD 62
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15223.3694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLT6_9PHAE4.980e-1569.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB64_ECTSI1.270e-1482.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.704

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15223contigE-fasciculatus_F_contig15223:2342..2689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15223.3694.1mRNA_E-fasciculatus_F_contig15223.3694.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15223 2342..2689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15223.3694.1 ID=prot_E-fasciculatus_F_contig15223.3694.1|Name=mRNA_E-fasciculatus_F_contig15223.3694.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=116bp
MRLLRWRCALLIATLAASNLVSPANSQESSVTSAGDDVEDSTEPAPEPTP
AVAEIDPSDDPPPETPSPVEEDEEEEEEEDELAAVEEEEDTPAADEAVET
PAPSEEEEDAPETPAP
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