prot_E-fasciculatus_F_contig15214.3688.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15214.3688.1
Unique Nameprot_E-fasciculatus_F_contig15214.3688.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length123
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15214.3688.1 vs. uniprot
Match: A0A6H5KX32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX32_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 7.740e-9
Identity = 81/121 (66.94%), Postives = 84/121 (69.42%), Query Frame = 0 
Query:    2 GSPAATGVAPPTSESAGDAEGKAAAPPNDKGTGRAGAGARAAAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARFANAYVGSSDDSEIPESRGSADSNSSSDDGSEP 122
            GSPA TGV PPT  SAGDA GKA APP            +AAAP              XXXXXXXXXXXXXXXXXXXXXXXXXXXX  FA+AYVGSSDDSE+PESR SA S SSSDDGSEP
Sbjct:  754 GSPAVTGVVPPTPGSAGDAAGKATAPPT-----------KAAAPGPSSTTRGRRRQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFADAYVGSSDDSEVPESRESAHSTSSSDDGSEP 863
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15214.3688.1 vs. uniprot
Match: D8LNQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ4_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 2.980e-7
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0 
Query:   88 ARFANAYVGSSDDSEIPESRGSADSNSSSDDGSEP 122
            ARFANA+VGSSDDSE+PESR SADSNSSSDDGSEP
Sbjct:  439 ARFANAHVGSSDDSEVPESRESADSNSSSDDGSEP 473
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15214.3688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX32_9PHAE7.740e-966.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ4_ECTSI2.980e-791.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15214contigE-fasciculatus_F_contig15214:2337..2705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15214.3688.1mRNA_E-fasciculatus_F_contig15214.3688.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15214 2337..2705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15214.3688.1 ID=prot_E-fasciculatus_F_contig15214.3688.1|Name=mRNA_E-fasciculatus_F_contig15214.3688.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=123bp
AGSPAATGVAPPTSESAGDAEGKAAAPPNDKGTGRAGAGARAAAPPKAAA
PRGRRRQRQSAPPEKAAAPGPSSATRGGRQQRHAGKPARFANAYVGSSDD
SEIPESRGSADSNSSSDDGSEP*
back to top