mRNA_E-fasciculatus_F_contig1521.3686.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI) HSP 1 Score: 1370 bits (3546), Expect = 0.000e+0 Identity = 691/707 (97.74%), Postives = 695/707 (98.30%), Query Frame = 1
Query: 1 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2121
MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVV+KVFS+MGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATT AADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERF+EFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXX KIQMKLEFRQQ VAEM LRLEGRRQEL+DLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct: 1 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSKMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQ------VAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA) HSP 1 Score: 837 bits (2162), Expect = 9.190e-294 Identity = 405/691 (58.61%), Postives = 515/691 (74.53%), Query Frame = 1
Query: 49 DELKDYMSPDEGDGD-LAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDN--VLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLG-DVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVK 2109
D L D+MS ++ D D L F+RP+L +D STAVVV N+P+V K KL GVV K+F++ GTI ++G+ P D G + GF F+NF ++A+ A A +N +QLDK H V+P+E+L +L S+P+EY P P ++PR D SWLADE HRDQFV+RYS P G HE V W E+ P+ CYGGEREK GKAW EL++ WSPQGTYL + H+PGIALWGGE+FEKQGRF H +VKV+EFSPCE Y++TCNF+ ++A+IVWEV +G +LR FP A G SLF+WS DG+++ARKG+D +SIY LPSM LLDKKSLKA G++DFEWSP + LAYWAPEQ N PARVSVVEIPSRK+LRQKNL VSECRLHWQ+EG YLCVKVLRHSK+KKTMYNNFE+FRV +P VPVE +E + V AFAWEP GDRFA+V G ++P++ +TFYTMKGGA NEL E+ TL+D+P NH+YWSP G ++AAMG++ G NG L FYDVE+++ L+++EHFR +Y+EWDPSGRY CTAV+QP+ GSHWKAQMDNGY+L+SFQGE+F E KDNFYQ+ WRPRP SLL+S EKKKVV+NL+KYE+ AM+ K++ K FR + VA + RL R EL++LR+GYDS DE+++ V++RT EV++SVK
Sbjct: 29 DPLADWMSEEDPDDDGLGDFQRPQLRMDFSTAVVVDNIPRVPAEKLVKLRGVVTKLFNQCGTIQENGICIPTD-AAGESLGFMFINFTTAEEARSAVAVINNYQLDKRHQFHVFPYERLDQLASVPDEYAPPPPMEYRPRPDLGSWLADENHRDQFVIRYSMPGVGGTPAHETIVNWCERFAPPTQCYGGEREKAQGKAWVELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFP--ARAFEGGPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQGEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFR------AHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE) HSP 1 Score: 650 bits (1676), Expect = 1.290e-225 Identity = 338/405 (83.46%), Postives = 346/405 (85.43%), Query Frame = 1
Query: 907 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2121
DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQ LETLQDRPFNHIYWSP+GNIC+LAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTG HWKAQMDNGYQLFSFQGERF+EFKKD+FYQIQWRPRPASLLTSAEKKKVVKNLRKY+K XXXXXX AM+DKIQMKLEFRQQASG S VA+MKLRLE RRQEL+DLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct: 14 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW--------------------------------------------QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQGERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL) HSP 1 Score: 625 bits (1613), Expect = 3.640e-211 Identity = 330/671 (49.18%), Postives = 432/671 (64.38%), Query Frame = 1
Query: 127 DLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2121
D S VVV LP V AKH KL VVKK+FS++GT+ D + PF G T GFAFV F A A T+N + LDK H + V + L + + PEE+ +P+ + F + +WL D RD FVLR+S E E+ WS+K + +L Y G REK GK WC +++WSPQGTYL TFH GIALWGG+ +EK GRF HK+VK+ FSP E Y++T + + AII+W+V T +MLRAFP A G + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+GV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+L W G +L VKV RHSKSKKT++ NFEIFRV E LVPVE+ E K + AF++EP G RFA+V G+ +L V+FY M GGA KNEL L TL D+P +H+YWSP GN +LA +G+ NG LEF+D + + ++ EHF+C ++EWDPSGR +AV QP+ S++K QMDNG+ L++FQG++ E KKD FYQ WRPRP +LL+ E K VVKNL+KYEK ++K + EF VA RRQE + L NGYDS+D+ Y+V++R+ + VLS KE +Q
Sbjct: 46 DYSMCVVVGGLPVVDNAKHGKLLNVVKKIFSQVGTVVD--IDMPF-AANGNTNGFAFVEFEQDTHANDAVRTINNFALDKRHTLLVNKYTDLEKYQKTPEEFVAPKIEKFVEPKNLKTWLMDSARRDMFVLRHST---------ETEIFWSDKGEV-TLDYDGAREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQGKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEF------VDLVAARAETARARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE) HSP 1 Score: 624 bits (1610), Expect = 2.700e-210 Identity = 329/695 (47.34%), Postives = 444/695 (63.88%), Query Frame = 1
Query: 61 DYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPK-LEVTFYTMKGGAG-KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2118
DY+S +E + ++ E + D S AVVV LP V ++KH KL VVKK+F ++G++ D + PF G T GFAFV + A A T+N + LDK H + V +E + R P+E+ +P+ F + SWL D RD FVLR+ E E+ WS+K + L Y G+REK GK WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK VK+ FSP E Y++T + + + AII+W+V T ++LRAFP A G + F+WSAD KY+AR+G D+IS+YELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR E+RQKNL VS+C+LHW +G +LCVKV RHSKSKKTMY NFE+FRV+E LVPVE +E K + AFAWEP G RFA V G+ + L V+FY M GG+ E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C+++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KKD F+Q WRPRP +LL+ A+ K VVKNL+K+EK +++ + + EF++ + + + GRR E L L GYDSDDE+ Y+V T + VL VKE +
Sbjct: 22 DYLSDEEVEDEVMTKAHEEADFCNDFSMAVVVGGLPVVDDSKHGKLLNVVKKIFGQVGSVVD--IDMPFGDD-GNTTGFAFVEYEQEAHANDAVRTINSFALDKRHTMNVNKYEDVERYLKTPDEFVAPKVDKFVEPKNLKSWLTDPSRRDMFVLRHGT---------ETEIFWSDKGEV-ELDYAGDREKTNGKQWCMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQGKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQE------LLQKRLITAAGRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL) HSP 1 Score: 619 bits (1597), Expect = 9.570e-209 Identity = 326/694 (46.97%), Postives = 441/694 (63.54%), Query Frame = 1
Query: 64 YMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGA-GKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2118
Y+S +E + ++ E + D S A+VV LP V E+KH KL VVKK+F ++G + D + PFD ++G T GFAF+ + A A T+N + LDK H + V +E + R PEE+ P F + +WL D RD FVLR+ E E+ WS+K + L Y G+REK+ GK WC +++WSPQG+YL TFH GIALWGGE++EK GRF HK+VK+ FSP E Y++T + + + AII+W+V T +MLRAFP + G + F+WSAD K++AR+GKD+IS+YELPSM+LLDKKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FRV E LVPVE +E K + AFAWEP G RFA V G+ +L V+FY M GG+ E+ L TL D+ +H+YWSP+GN +LA +G+ NG+LEF+DV Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KK+ FYQ WRPRP +LL+ +E VVKNL+ +EK +++ + + EF++ +A RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct: 23 YLSDEELEDEMTTKAHEEADFANDYSMAIVVGGLPVVDESKHGKLLNVVKKIFGQVGNVVD--IQVPFD-SSGKTTGFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEL-ELDYAGDREKKNGKQWCSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAA------ARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: A0A2D4C7L6_PYTIN (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7L6_PYTIN) HSP 1 Score: 619 bits (1596), Expect = 1.310e-208 Identity = 326/694 (46.97%), Postives = 440/694 (63.40%), Query Frame = 1
Query: 61 DYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAA-----ADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2118
DY+S +E + ++A + E + D S VVV LP + +KH KL VVKK+FS++G + D + PF G+T GFAFV F A A T+N + LDK H + V +E L + + P E+ +P+ F + +WL D RD F LR+ E E+ WS+K + SL Y G+REK+ GK WC +++WSP GTYLTTFH G+ALW GE +EK GRF H++VK+ FSP E Y++T + + D AI+VWEV TG++LR+FP+ G + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+G+ DF WSP D VLAYWAPE N PARVS+VE+PSR+ELRQKNL VS+C+L W G +L VKV RHSKSKKT++ NFE+FR+RE LVPVE +E K+ + AF++EP G RFA+V G+ +L V+FY M GG KNEL L TL D+P +H+YWSP GN +LA MG+ NG LEF+D + + ++ EHF+C ++EWDPSGR +AV QP+ S++K QMDNG+ L+SFQG++ E KKD FYQ WRPRP +LL+ E VVKNL+KYE+ ++K + EF + V K R E + L GYDS+DE Y+V SRT + V+S E +
Sbjct: 22 DYLSDEEVEDEVATQKHEEEDFCNDFSMCVVVGGLPVIDNSKHAKLLNVVKKIFSQVGAVVD--IDMPFG-ANGMTTGFAFVEFEQEAHAADAVRTINNFALDKRHTLLVNKYEDLHKFEATPSEFVAPKIDKFVEPKNLKTWLTDSARRDMFALRHGT---------ETEIFWSDKGEI-SLDYAGDREKQNGKQWCSQYVLWSPHGTYLTTFHPQGVALWAGEHYEKVGRFAHRNVKIAVFSPNENYLITLSETEVDNAIVVWEVKTGKLLRSFPLGKPTGEKGEVVQGIMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGIHDFFWSPTDPVLAYWAPEGNNVPARVSLVELPSRRELRQKNLFNVSDCKLQWHPNGTFLRVKVTRHSKSKKTLFTNFELFRLRESLVPVEMLEMKETIVAFSFEPKGSRFAVVHGEGNQRLNVSFYDMHGGNKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGMGE----MNGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVMSAVCQPIDNSYYKFQMDNGFTLWSFQGKKLLEEKKDAFYQFLWRPRPRNLLSDKEYADVVKNLKKYERRFNEMDRLKERERVAAEKAEKQRQIAEF------TELVQARKSAARALRAEYIALLGGYDSEDEDEYIVQSRTFDDVISESEEV 692
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP) HSP 1 Score: 619 bits (1595), Expect = 1.910e-208 Identity = 330/695 (47.48%), Postives = 438/695 (63.02%), Query Frame = 1
Query: 61 DYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGAGK-NELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2118
DY+S +E + ++ E + D S +VVV LP V E KH KL VVKK+F ++G + D + PF G T GFAFV + A A T+N + LDK H + V +E + R + P E+ +P+ F + +WLAD RD FVLR+ E E+ WS+K + L Y G+REK K WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK+VK+ FSP E Y++T + + D AII+W+V T +MLRAFP A G + F+WSAD KY+AR+GKD+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTMY NFE+FRV E LVPVE +E K+ + AFAWEP G RFA G+ +L V+FY M GG+ E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KKD FYQ WRPRP +LL+ E VVKNL+K+EK +++ + + EF++ A RR E + L +GYDS+DES Y+V S T + VL KE +
Sbjct: 22 DYLSDEEVEDEVTSKAHEEADFCNDYSMSVVVGGLPFVDETKHGKLLNVVKKIFGQVGPVVD--IRMPFGGG-GKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAEFAAPKVDKFVEPKNLKTWLADPARRDMFVLRHGS---------ETELFWSDKGEI-ELDYAGDREKLNDKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLEKRLASAA------ARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA) HSP 1 Score: 614 bits (1584), Expect = 8.610e-207 Identity = 329/695 (47.34%), Postives = 439/695 (63.17%), Query Frame = 1
Query: 61 DYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAAA-----DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKG-GAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2118
DY+S +E + ++ E + D S AVVV LP V E+KH KL VVKK+F ++G + D + PFD + G T GFAFV + AK A T+N + LDK H + V +E + R E+ +P+ + F + +WL D RD FVLR+ E E+ WS+K + Y G+REK GK WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK+V FSP E Y++T + + D AII+W+V T +MLRAFP A G + F+WSA KY+AR+G D+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K + AFAWEP G RFA V G+ +L V+FY M G E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KK++FYQ WRPRP +LL+ AE KKVVKNL+KYEK +++ + EF++ A + RR E + L +GYDS+DE+ Y+V S T + VL KE I
Sbjct: 22 DYLSDEEAEDEVTIKANEEEDFCNDFSMAVVVGGLPVVDESKHGKLLNVVKKIFGQVGAVVD--IHMPFDGS-GKTTGFAFVEYEQEAHAKDAVRTINNFALDKRHTMIVNKYEDIERYEKTTTEFVAPKVEKFVEPKNLQTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEI-EFVYAGDREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAV------RRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Match: A0A6G0L700_9STRA (Eukaryotic translation initiation factor 3 subunit B n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0L700_9STRA) HSP 1 Score: 613 bits (1581), Expect = 2.430e-206 Identity = 326/695 (46.91%), Postives = 437/695 (62.88%), Query Frame = 1
Query: 61 DYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVKKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTAAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGAGK-NELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGSSCVAEMKLRLEGRRQELLDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2118
DY+S +E + ++ E + D S AVVV LP V E KH KL VVKK+F ++GT+ D + PF G T GFAFV + A A T+N + LDK H + V +E + R + P ++ +P+ F + +WL D RD FVLR+ E E+ WS+K + L Y G+REK GK WC +++WS QGTYL TFH GIALWGG+++EK GRF HK+VK+ FSP E Y++T + + AII+W+V T +MLRAFP +A G + F+WSAD KY+AR+GKD+IS+YELPSM+LL+KKSL+AE V DF WSP D +LAYWA E N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTMY NFE+FRV E LVPV+ +E K+ + AFAWEP G RFA V G+ +L V+FY M GG+ E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KKD FYQ WRPRP +LL+ E VVKNL+K+EK +++ + + EF++ A RR E + L +GYDS+DES Y+V S T + VL KE +
Sbjct: 22 DYLSDEEVEDEVTSKAHEEADFCNDYSMAVVVGGLPAVDETKHAKLLNVVKKIFGQVGTVVD--IHMPFG-AGGKTTGFAFVEYAQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAQFTAPKVDKFVEPKNLQTWLVDPARRDMFVLRHGS---------ETELFWSDKGEL-ELDYAGDREKTNGKQWCSQYVLWSTQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNEKYLITVSETDVESAIIIWDVKTSKMLRAFPAGKPSAVKGEVVQGLMTPFKWSADDKYVARRGKDVISVYELPSMKLLEKKSLRAENVHDFFWSPTDPILAYWASEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVDMLEVKENIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDASEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRKEQEFQELLEKRLATAT------ARRAEYVALLDGYDSEDESEYIVQSHTYDDVLEEKEEV 693 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1521.3686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1521.3686.1 >prot_E-fasciculatus_F_contig1521.3686.1 ID=prot_E-fasciculatus_F_contig1521.3686.1|Name=mRNA_E-fasciculatus_F_contig1521.3686.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=708bp MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVback to top mRNA from alignment at E-fasciculatus_F_contig1521:134..8440- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1521.3686.1 ID=mRNA_E-fasciculatus_F_contig1521.3686.1|Name=mRNA_E-fasciculatus_F_contig1521.3686.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8307bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1521:134..8440- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1521:134..8440- >mRNA_E-fasciculatus_F_contig1521.3686.1 ID=mRNA_E-fasciculatus_F_contig1521.3686.1|Name=mRNA_E-fasciculatus_F_contig1521.3686.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4248bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1521:134..8440- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |