prot_E-fasciculatus_F_contig15209.3685.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig15209.3685.1
Unique Name	prot_E-fasciculatus_F_contig15209.3685.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	112

Homology

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: A0A6H5L299_9PHAE (Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L299_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.480e-63
Identity = 105/113 (92.92%), Postives = 108/113 (95.58%), Query Frame = 0

Query:    1 FDITTEIRVSPGGSLEMTAEVGPLKGVT-RDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEGGAGLLM 112
            FDI TEIRVSPGG+LEMTAEV PLKGVT RDCLSLARVG+ LQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSG VEDQHVPYMVPSENGGKADVRWMALR+GEGGAGLLM
Sbjct: 1344 FDIATEIRVSPGGTLEMTAEVEPLKGVTTRDCLSLARVGILLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLM 1456

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: A0A3S0BPU6_9BACL (Beta-galactosidase n=1 Tax=Paenibacillus whitsoniae TaxID=2496558 RepID=A0A3S0BPU6_9BACL)

HSP 1 Score: 107 bits (268), Expect = 6.330e-25
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0

Query:    1 FDITTEIRVSPGGSLEMTAEVGPLKGVTRDCLS-LARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEG 106
            FD++  + V   G LE+T E+ P      D L  L R GV+L +P GF R+ WFG+GP ECY DRK     GV+SG+V++Q VPY+ P ENG K+DVRW  L   EG
Sbjct:  831 FDVSVSVVVHASGELELTQELVPRDLGNGDALPPLPRFGVELAMPQGFDRLAWFGRGPHECYVDRKESGKLGVYSGSVQEQFVPYIKPQENGNKSDVRWAELTNAEG 937

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: UPI0010C143A6 (DUF4981 domain-containing protein n=1 Tax=Paenibacillus sp. SY21-1 TaxID=2562315 RepID=UPI0010C143A6)

HSP 1 Score: 103 bits (258), Expect = 1.420e-23
Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 0

Query:    1 FDITTEIRVSPGGSLEMTAEVGPLKGVTRDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEGGAGL 110
            F I T   +   GSL++   + P +G+      L R G++L +P  F R  WFG+GP ECY DRKH    G+FSG V++Q+VPY+ P ENG KADVRW  +  G GGAG+
Sbjct:  878 FRIRTVYVIHADGSLQIELSLEPREGLP----PLPRFGLELSMPDEFDRFAWFGRGPHECYADRKHSGKLGIFSGTVDEQYVPYIKPQENGSKADVRWATVMNG-GGAGI 982

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: UPI00098E7475 (uncharacterized protein LOC109840411 isoform X1 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E7475)

HSP 1 Score: 102 bits (255), Expect = 3.600e-23
Identity = 50/83 (60.24%), Postives = 56/83 (67.47%), Query Frame = 0

Query:   29 RDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEGGAGLL 111
            RD   L RVGV+L L      V W+GKGPFECY DRK  A  GV+   VED HVPY+VPSE GG+ADVRW+A R G GG GL 
Sbjct:  914 RDLPPLPRVGVELHLDKSLNNVTWYGKGPFECYPDRKEAAHVGVYESNVEDMHVPYIVPSECGGRADVRWVAFRNG-GGHGLF 995

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: A0A5P1ENB0_ASPOF (Beta-galactosidase n=3 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1ENB0_ASPOF)

HSP 1 Score: 102 bits (255), Expect = 3.670e-23
Identity = 50/83 (60.24%), Postives = 56/83 (67.47%), Query Frame = 0

Query:   29 RDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEGGAGLL 111
            RD   L RVGV+L L      V W+GKGPFECY DRK  A  GV+   VED HVPY+VPSE GG+ADVRW+A R G GG GL 
Sbjct:  922 RDLPPLPRVGVELHLDKSLNNVTWYGKGPFECYPDRKEAAHVGVYESNVEDMHVPYIVPSECGGRADVRWVAFRNG-GGHGLF 1003

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: A0A0A9PK18_ARUDO (Beta-galactosidase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9PK18_ARUDO)

HSP 1 Score: 94.7 bits (234), Expect = 5.150e-22
Identity = 47/99 (47.47%), Postives = 57/99 (57.58%), Query Frame = 0

Query:    8 RVSPGGSLEMTAEVGPLKGVTRDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEG 106
            R+   G + +  EV P      D   L RVGV          V W+G+GPFECY DRK  A  GV+  +VED HVPY+ P E GG+ADVRWMALR  +G
Sbjct:    4 RIYESGDVILEYEVNP----KADLPPLPRVGVVFNAEKSLSHVTWYGRGPFECYPDRKAAAHVGVYESSVEDLHVPYIAPGECGGRADVRWMALRNADG 98

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: UPI0009BC57FB (DUF4981 domain-containing protein n=2 Tax=Cohnella TaxID=329857 RepID=UPI0009BC57FB)

HSP 1 Score: 99.4 bits (246), Expect = 5.900e-22
Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 0

Query:    1 FDITTEIRVSPGGSLEMTAEVGPLKGVTRDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEG 106
            F   T   V  GG L + A V P +G+      L R G +L +P GF R++WFG+GP ECY DRK     GV+ G V++Q VPY+ P ENG KADVRW A+    G
Sbjct:  866 FRARTTAAVRAGGELLLEALVEPREGLP----PLPRFGFELSMPAGFERLDWFGRGPHECYADRKESGKLGVYGGTVQEQFVPYVKPQENGNKADVRWAAVTNAAG 967

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: A0A7C5THN8_9ARCH (Beta-galactosidase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C5THN8_9ARCH)

HSP 1 Score: 99.4 bits (246), Expect = 5.900e-22
Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 0

Query:    1 FDITTEIRVSPGGSLEMTAEVGPLKGVTRDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMAL 101
            F    + R+   G + +   V P KG+      L RVG+QL +P GF ++ WFG+GP E Y DRK GA  G++S  V++QHVPY+ P ENG K+DVRW+AL
Sbjct:  890 FTCIYDYRIYGSGDIIVEVNVNPKKGLPPH---LPRVGIQLTIPRGFEKILWFGRGPHENYCDRKEGALIGIYSSTVDEQHVPYIRPQENGNKSDVRWIAL 987

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: A0A231RGP3_9BACL (Beta-galactosidase n=1 Tax=Cohnella sp. CIP 111063 TaxID=1955714 RepID=A0A231RGP3_9BACL)

HSP 1 Score: 98.6 bits (244), Expect = 1.100e-21
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0

Query:    1 FDITTEIRVSPGGSLEMTAEVGPLKGVTRDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEG 106
            F   T   VS GG L + A + P +G+      L R G +L +P GF R++WFG+GP ECY DRK     G++ G V++Q VPY+ P ENG KAD+RW  +    G
Sbjct:  902 FRARTIAVVSAGGELRLEARIEPREGLP----PLPRFGFELTMPSGFERMDWFGRGPHECYADRKESGKLGLYGGTVQEQFVPYIKPQENGNKADIRWAGVTNASG 1003

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BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Match: A0A1V5RRV8_9CHLR (Beta-galactosidase n=1 Tax=Chloroflexi bacterium ADurb.Bin325 TaxID=1852859 RepID=A0A1V5RRV8_9CHLR)

HSP 1 Score: 98.6 bits (244), Expect = 1.100e-21
Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 0

Query:   13 GSLEMTAEVGPLKGVTRDCLSLARVGVQLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMALRRGEGGAGLL 111
            G + +   V P +G+ +    L R+GV+L+LPP +    W+G+GP E Y DRK GA  GV+SG+V++Q+VPY++P ENG K DVRW A    +G AGLL
Sbjct:  967 GDVLLHLHVAPSEGLPQ----LPRIGVELELPPAYDTFTWYGRGPHEAYADRKEGARIGVYSGSVDEQYVPYIMPEENGNKIDVRWAAFTDADG-AGLL 1060

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig15209.3685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L299_9PHAE	2.480e-63	92.92	Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 R...	[more]
A0A3S0BPU6_9BACL	6.330e-25	48.60	Beta-galactosidase n=1 Tax=Paenibacillus whitsonia...	[more]
UPI0010C143A6	1.420e-23	46.36	DUF4981 domain-containing protein n=1 Tax=Paenibac...	[more]
UPI00098E7475	3.600e-23	60.24	uncharacterized protein LOC109840411 isoform X1 n=...	[more]
A0A5P1ENB0_ASPOF	3.670e-23	60.24	Beta-galactosidase n=3 Tax=Asparagus officinalis T...	[more]
A0A0A9PK18_ARUDO	5.150e-22	47.47	Beta-galactosidase n=1 Tax=Arundo donax TaxID=3570...	[more]
UPI0009BC57FB	5.900e-22	46.23	DUF4981 domain-containing protein n=2 Tax=Cohnella...	[more]
A0A7C5THN8_9ARCH	5.900e-22	46.53	Beta-galactosidase n=1 Tax=Candidatus Bathyarchaeo...	[more]
A0A231RGP3_9BACL	1.100e-21	43.40	Beta-galactosidase n=1 Tax=Cohnella sp. CIP 111063...	[more]
A0A1V5RRV8_9CHLR	1.100e-21	47.47	Beta-galactosidase n=1 Tax=Chloroflexi bacterium A...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004199	Beta galactosidase small chain/ domain 5	SMART	SM01038	Bgal_small_N_2	coord: 2..112 e-value: 7.3E-4 score: -84.9
IPR004199	Beta galactosidase small chain/ domain 5	PFAM	PF02929	Bgal_small_N	coord: 4..104 e-value: 2.1E-30 score: 106.2
IPR014718	Glycoside hydrolase-type carbohydrate-binding	GENE3D	2.70.98.10		coord: 1..112 e-value: 5.9E-37 score: 129.5
IPR023933	Glycoside hydrolase, family 2, beta-galactosidase	PANTHER	PTHR46323	FAMILY NOT NAMED	coord: 2..106
None	No IPR available	PANTHER	PTHR46323:SF2	GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN	coord: 2..106
IPR011013	Galactose mutarotase-like domain superfamily	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 3..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig15209	contig	E-fasciculatus_F_contig15209:67..1031 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig15209.3685.1	mRNA_E-fasciculatus_F_contig15209.3685.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig15209 67..1031 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig15209.3685.1 ID=prot_E-fasciculatus_F_contig15209.3685.1|Name=mRNA_E-fasciculatus_F_contig15209.3685.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=112bp
FDITTEIRVSPGGSLEMTAEVGPLKGVTRDCLSLARVGVQLQLPPGFGRV
EWFGKGPFECYQDRKHGATTGVFSGAVEDQHVPYMVPSENGGKADVRWMA
LRRGEGGAGLLM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011013	Gal_mutarotase_sf_dom
IPR023933	Glyco_hydro_2_beta_Galsidase
IPR014718	GH-type_carb-bd
IPR004199	B-gal_small/dom_5