prot_E-fasciculatus_F_contig15202.3682.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15202.3682.1
Unique Nameprot_E-fasciculatus_F_contig15202.3682.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length275
Homology
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A6H5JH71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH71_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 1.380e-102
Identity = 201/216 (93.06%), Postives = 203/216 (93.98%), Query Frame = 0
Query:    4 QVSLPLKPPPQPDPPENWPYLRLALRPLDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTFYNAVDTLCCLKPTRDGMQVAAGFTDRMVRAWRTAPNAPHPPTADETAPVPARTTTGGXXXXXXXXXXXDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLADTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVGSSAGYV 219
            QVSLPLKPPPQPDP ENWPYLRLALRPLDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTF+NAVDTLCCLKPTRDGMQVAAGFTDRMVRAWRTAPNAPHPPTADETA VPART    XXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXX     DSGL+DTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVGSSAGYV
Sbjct:  245 QVSLPLKPPPQPDPSENWPYLRLALRPLDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTFFNAVDTLCCLKPTRDGMQVAAGFTDRMVRAWRTAPNAPHPPTADETAAVPARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----DSGLSDTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVGSSAGYV 455          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: D7FXT3_ECTSI (TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT3_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 9.950e-73
Identity = 176/265 (66.42%), Postives = 178/265 (67.17%), Query Frame = 0
Query:    1 SSQQVSLPLKPPPQPDPPENWPYLRLALRPLDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTFYNAVDTLCCLKPTRDGMQVAAGFTDRMVRAWRTAPNAPHPPTADETAPVPARTTTGGXXXXXXXXXXXDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLADTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVGSSAGYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDCASPLRIFAG 265
            + + VSLPLKPPPQPDPPENWPYLRLALRPLDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTFYNAVDTLCCLKPTRDGMQ                                                                                  DSGLADTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVG SAG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDCASPLRIFAG
Sbjct:  322 TERDVSLPLKPPPQPDPPENWPYLRLALRPLDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTFYNAVDTLCCLKPTRDGMQRNGAAXXXXXXXXX-------------------------------------------------------------------QDSGLADTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVGGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDCASPLRIFAG 519          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A835YMV1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.930e-8
Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 0
Query:  172 VRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDI 207
            VRLVGH++P+Y +SW+PD RFLL+ GGDG VRLWD+
Sbjct:  424 VRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDL 459          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A099P2A2_PICKU (LisH domain-containing protein n=4 Tax=Pichia kudriavzevii TaxID=4909 RepID=A0A099P2A2_PICKU)

HSP 1 Score: 62.8 bits (151), Expect = 1.980e-7
Identity = 47/179 (26.26%), Postives = 73/179 (40.78%), Query Frame = 0
Query:   31 LDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTFYNAVDTLCCLKPTRDGMQVAAGFTDRMVRAWRTAPNAPHPPTADETAPVPARTTTGGXXXXXXXXXXXDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLADTV--RLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDI 207
            L S+      +T +G    +++ P  P V M TF+N  + L  L+   D   +A GF D  ++ W          + D +   P R+               D                               +SG+ + +  +LVGHS PVYG+S+SPDG++LLS+  D  VRLW +
Sbjct:  461 LTSSSYSHLNNTGDGSRNVYISQPSLPSVCMYTFHNTNNDLTSLEYHPDSTMIAGGFQDSFIKLW----------SIDGS---PLRSVLKNDPYNRDIDLNDDNDNGGA-------------------------NSGIPNILSRKLVGHSGPVYGLSFSPDGKYLLSSSADSTVRLWSL 601          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A150GP73_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GP73_GONPE)

HSP 1 Score: 57.8 bits (138), Expect = 9.830e-6
Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
Query:  174 LVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGR 211
            LVGH  PV  V+WSPDGR +  AGGDG VRLW+ A GR
Sbjct: 1127 LVGHMGPVNAVAWSPDGRLIAGAGGDGTVRLWEAATGR 1164          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A7S0HK76_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HK76_9CRYP)

HSP 1 Score: 55.1 bits (131), Expect = 1.370e-5
Identity = 20/38 (52.63%), Postives = 29/38 (76.32%), Query Frame = 0
Query:  174 LVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGR 211
            L GH + +Y VSWSPDGRF+ +AG DG +++WD  +G+
Sbjct:   67 LRGHEEAIYSVSWSPDGRFVQTAGSDGAIKIWDWRKGK 104          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A2H6ACK0_9BACT (Uncharacterized protein n=1 Tax=bacterium HR36 TaxID=2035431 RepID=A0A2H6ACK0_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 2.910e-5
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0
Query:  174 LVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGR 211
            L GH++ VY V+WSPDGR L SAG D  VRLW++A GR
Sbjct:   84 LTGHTELVYHVAWSPDGRLLASAGFDNSVRLWEVATGR 121          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A7V2EB91_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7V2EB91_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 3.970e-5
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  165 DSGLADTVR-LVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGR 211
            DS     +R L GHS+ VY ++WSPDGR L SAG DG VRLW++  G+
Sbjct:  177 DSAKPSLIRELTGHSELVYQLAWSPDGRLLASAGFDGNVRLWELTSGQ 224          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A099NQ59_PICKU (Uncharacterized protein (Fragment) n=1 Tax=Pichia kudriavzevii TaxID=4909 RepID=A0A099NQ59_PICKU)

HSP 1 Score: 53.9 bits (128), Expect = 6.120e-5
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 0
Query:  173 RLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDI 207
            +LVGHS PVYG+S+SPDG++LLS+  D  VRLW +
Sbjct:   23 KLVGHSGPVYGLSFSPDGKYLLSSSADSTVRLWSL 57          
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Match: A0A7S3TMY1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TMY1_EMIHU)

HSP 1 Score: 52.8 bits (125), Expect = 6.850e-5
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 0
Query:  169 ADTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDI 207
            A +  L+GHS PVYGV WS D +FL+SA  DG  RLW +
Sbjct:   29 ASSYTLLGHSGPVYGVCWSRDDKFLISASQDGSARLWSV 67          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15202.3682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JH71_9PHAE1.380e-10293.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXT3_ECTSI9.950e-7366.42TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculo... [more]
A0A835YMV1_9STRA7.930e-869.44WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A099P2A2_PICKU1.980e-726.26LisH domain-containing protein n=4 Tax=Pichia kudr... [more]
A0A150GP73_GONPE9.830e-665.79Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A7S0HK76_9CRYP1.370e-552.63Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A2H6ACK0_9BACT2.910e-563.16Uncharacterized protein n=1 Tax=bacterium HR36 Tax... [more]
A0A7V2EB91_9BACT3.970e-554.17Uncharacterized protein n=1 Tax=Gemmataceae bacter... [more]
A0A099NQ59_PICKU6.120e-562.86Uncharacterized protein (Fragment) n=1 Tax=Pichia ... [more]
A0A7S3TMY1_EMIHU6.850e-556.41Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 214..253
e-value: 1.9E-6
score: 37.4
coord: 167..206
e-value: 7.4E-9
score: 45.4
coord: 57..96
e-value: 14.0
score: 9.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 221..253
e-value: 2.9E-5
score: 24.7
coord: 174..206
e-value: 3.1E-8
score: 34.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 174..215
score: 17.393
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 221..262
score: 11.678
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 140..274
e-value: 2.3E-33
score: 117.5
NoneNo IPR availablePANTHERPTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 56..274
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 193..207
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 174..274
score: 24.653
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 57..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15202contigE-fasciculatus_F_contig15202:339..2970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15202.3682.1mRNA_E-fasciculatus_F_contig15202.3682.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15202 339..2970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15202.3682.1 ID=prot_E-fasciculatus_F_contig15202.3682.1|Name=mRNA_E-fasciculatus_F_contig15202.3682.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=275bp
SSQQVSLPLKPPPQPDPPENWPYLRLALRPLDSAQLKDTLSTPEGGARPF
LANPLSPHVVMVTFYNAVDTLCCLKPTRDGMQVAAGFTDRMVRAWRTAPN
APHPPTADETAPVPARTTTGGSGSGSSTPSPGDRNGGAAAGGGSGQQQQQ
QQQQQQQQQQRQQQDSGLADTVRLVGHSQPVYGVSWSPDGRFLLSAGGDG
GVRLWDIARGRVGSSAGYVRYDGHCGPVWDVAFGPAGYYFATASDDRTAC
LWSTDCASPLRIFAGHLKGVLCVT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat