mRNA_E-fasciculatus_F_contig15200.3680.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: D7FXL2_ECTSI (Sexually induced protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXL2_ECTSI) HSP 1 Score: 116 bits (290), Expect = 2.940e-31 Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGS EGRDCSGRG C +
Sbjct: 135 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSIEGRDCSGRGICDY 189
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: B8CC41_THAPS (Sig3-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC41_THAPS) HSP 1 Score: 99.8 bits (247), Expect = 8.450e-25 Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y TPWDAEK +GCKCD G+RGPDCS +ECPSG D++GGDG+ +GR+CSGRG C F
Sbjct: 134 YETPWDAEKHLGCKCDVGYRGPDCSRKECPSGEDILGGDGAVKGRECSGRGNCNF 188
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: F0Y4Z3_AURAN (EGF-like domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Z3_AURAN) HSP 1 Score: 99.8 bits (247), Expect = 1.290e-24 Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y+TPWDA K VGC CD GFRGPDCSLQECPSG DV+ GDG+T+GRDCSGRG C +
Sbjct: 153 YDTPWDAMKHVGCVCDLGFRGPDCSLQECPSGTDVLSGDGNTKGRDCSGRGLCDY 207
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: A0A7S2ENT8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENT8_TRICV) HSP 1 Score: 97.1 bits (240), Expect = 1.380e-24 Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y PWD EK VGCKCD G+RGPDCS +ECPSG DV+GGDGS EGRDCSGRG C +
Sbjct: 61 YTGPWDDEKHVGCKCDIGYRGPDCSQKECPSGDDVLGGDGSDEGRDCSGRGMCDY 115
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: Q9Y0F6_THAWE (Sexually induced protein 3 n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q9Y0F6_THAWE) HSP 1 Score: 99.0 bits (245), Expect = 2.020e-24 Identity = 39/55 (70.91%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y+TPWDAEK +GCKCDAG+RGPDCS +ECPSG D++G +G +EGRDCSGRG+C +
Sbjct: 133 YDTPWDAEKHLGCKCDAGYRGPDCSQKECPSGDDILGREGGSEGRDCSGRGKCNY 187
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: K0R418_THAOC (EGF-like domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R418_THAOC) HSP 1 Score: 97.8 bits (242), Expect = 7.360e-24 Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y PWD EK +GCKCD G+RGPDCS +ECPSGADV+GG+G+ EGRDCSGRG C +
Sbjct: 136 YELPWDGEKAMGCKCDPGYRGPDCSQKECPSGADVLGGEGAAEGRDCSGRGNCNY 190
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: A0A835ZIV1_9STRA (Sexually induced protein 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIV1_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.080e-22 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y PWDA+K VGCKCD G+RGPDCSL+ECP+G D MGG G+ +GRDCSGRG C +
Sbjct: 135 YTQPWDAQKHVGCKCDPGYRGPDCSLRECPTGPDQMGGSGAAQGRDCSGRGICDY 189
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: A0A7S2BSV2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSV2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.530e-22 Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y PWDA K VGC CD G+RGPDCSLQECPSG DV+ GDG+++GRDCSGRG C +
Sbjct: 135 YTKPWDAMKHVGCVCDLGYRGPDCSLQECPSGVDVLKGDGNSKGRDCSGRGICNY 189
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: A0A482V3R8_9ARCH (EGF-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V3R8_9ARCH) HSP 1 Score: 90.5 bits (223), Expect = 9.970e-22 Identity = 37/55 (67.27%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y TPWDA+K VGC CD G+RGPDCSL+ECPSG D++ G G+ GRDCSGRG C +
Sbjct: 82 YETPWDADKHVGCVCDVGYRGPDCSLKECPSGPDILKGFGNEAGRDCSGRGLCDY 136
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Match: A0A7S0SS37_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS37_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.710e-21 Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 1 YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECYF 165
Y+TPWDA K VGC CD G RGPDCSL ECPSGADV+GG G+ GRDCSGRG C +
Sbjct: 135 YSTPWDANKYVGCVCDLGRRGPDCSLLECPSGADVLGGYGNETGRDCSGRGICDY 189 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15200.3680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15200.3680.1 >prot_E-fasciculatus_F_contig15200.3680.1 ID=prot_E-fasciculatus_F_contig15200.3680.1|Name=mRNA_E-fasciculatus_F_contig15200.3680.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=55bp YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRback to top mRNA from alignment at E-fasciculatus_F_contig15200:2866..3030- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15200.3680.1 ID=mRNA_E-fasciculatus_F_contig15200.3680.1|Name=mRNA_E-fasciculatus_F_contig15200.3680.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=165bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15200:2866..3030- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15200:2866..3030- >mRNA_E-fasciculatus_F_contig15200.3680.1 ID=mRNA_E-fasciculatus_F_contig15200.3680.1|Name=mRNA_E-fasciculatus_F_contig15200.3680.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=330bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15200:2866..3030- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |