mRNA_E-fasciculatus_F_contig1520.3678.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: D7FRH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH6_ECTSI) HSP 1 Score: 615 bits (1587), Expect = 7.770e-219 Identity = 299/327 (91.44%), Postives = 315/327 (96.33%), Query Frame = 1
Query: 1 MTTLELAFLDPKTIKDSQVDEVTHVVSKAFQDFNTSIGAPVEVYEEDFGHPEMGPSIIQSICKSYEAYAVVADGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYIGGFLDPPSEESLPPPPAPSRVTMKAMVAGDVEECGELFLEAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGKVVGYTTGFYLVGHTVAKSQDVFCDIFREGSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLKIFRATILMARGHYEHTPWPDAAGHVVAPSISGY 981
MT LELAFLDPKTIKDSQ+DEVTHVVS+AFQDFNTSIGAPVEVYEE+FGHPE GP IIQSICKS+EAYAVVADGGAGKIVGVSFVDVHA+GSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQY+GGFL+PPSE SL PPPAPS VT+KAMVAGDVEEC E+FLEAHGKGCGWDRRADITGCL SGAPFPMLVARDADGKVVGYTTGFYL+GHTVAKSQD+FCD+FRE SKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGL+IFRATI+MARGHYEHTPW DA G+VVAPS SG+
Sbjct: 1 MTALELAFLDPKTIKDSQMDEVTHVVSRAFQDFNTSIGAPVEVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYMGGFLEPPSEGSLSPPPAPSGVTLKAMVAGDVEECAEMFLEAHGKGCGWDRRADITGCLESGAPFPMLVARDADGKVVGYTTGFYLMGHTVAKSQDIFCDMFRESSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLRIFRATIVMARGHYEHTPWQDAIGNVVAPSASGH 327
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: D7FVW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW9_ECTSI) HSP 1 Score: 571 bits (1472), Expect = 2.380e-201 Identity = 273/327 (83.49%), Postives = 303/327 (92.66%), Query Frame = 1
Query: 1 MTTLELAFLDPKTIKDSQVDEVTHVVSKAFQDFNTSIGAPVEVYEEDFGHPEMGPSIIQSICKSYEAYAVVADGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYIGGFLDPPSEESLPPPPAPSRVTMKAMVAGDVEECGELFLEAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGKVVGYTTGFYLVGHTVAKSQDVFCDIFREGSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLKIFRATILMARGHYEHTPWPDAAGHVVAPSISGY 981
MTT EL F+DPK+I DSQVDEVT VVSKAFQDFNTSI PVEVYEE+FGHP +GP++IQSICKSYE YAVV DGGAGKIVGVSFVDVHA+GS+VA LGPV+S+A GAGKKSFVAAC YAEELGFSTL+L QIAANSRSFSLYAKLGFETKHT QYIGGFL+ PSE SLP PPAPS VT+KAMVAGDVEEC ELFLEAHGK CGWDRRADITGCLGSG PFPMLVARDA+GKVVGY+TGF+++GHTVAKSQD+FC +FREGSKLH+QAGLPCP+F+CPVEFTGLLSW LAQKGLK+FRA+++MARGHYEHTPWP+AAGH+VAPS +GY
Sbjct: 1 MTTQELVFIDPKSINDSQVDEVTQVVSKAFQDFNTSINTPVEVYEEEFGHPAIGPTVIQSICKSYEGYAVVEDGGAGKIVGVSFVDVHAKGSKVATLGPVASLASGAGKKSFVAACDYAEELGFSTLILTQIAANSRSFSLYAKLGFETKHTVQYIGGFLEQPSEGSLPLPPAPSGVTLKAMVAGDVEECAELFLEAHGKDCGWDRRADITGCLGSGFPFPMLVARDANGKVVGYSTGFFMIGHTVAKSQDIFCYMFREGSKLHKQAGLPCPKFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHYEHTPWPNAAGHIVAPSTTGY 327
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: D7FRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH7_ECTSI) HSP 1 Score: 241 bits (616), Expect = 1.780e-74 Identity = 124/140 (88.57%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 55 VDEVTHVVSKAFQDFNTSIGAPVEVYEEDFGHPEMGPSIIQSICKSYEAYAVVADGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYIGG 474
+DEVTHVVSKAFQDFNTS+GAPVEVYEE+FGHPE GP IIQSICKS+EAYAVVADGGAGKIVGVSFVDVHA+GSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFE + + + G
Sbjct: 1 MDEVTHVVSKAFQDFNTSMGAPVEVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFEGQASLKVTTG 140
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: A0A6H5KFB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB4_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.540e-64 Identity = 143/333 (42.94%), Postives = 166/333 (49.85%), Query Frame = 1
Query: 46 DSQVDEVTHVVSKAFQDFNTSIGAPVEVYEEDFGHPEMGPSIIQ------------SICKSY---------EAYAVVADGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYIGGFLDPPSEESLPPPPAPSRVTMKAMVAGDVEECGELFLEAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGKVVGYTTGFYLVGHTVAKSQDVFCDIFREGSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLKIFRATILMARGHYEHTPWPDAAGHVVAPSISGY 981
DSQVDEVT VVSKA QDFNTS+ APVEVYEEDFGHP +GP++IQ + K + + A V DGGAGKIVGVSFVDVHA+GSRVA LGPV+S+A GAGK SFVAACAYAEELGFSTL +G P +DGKVVGY+TG T+ RF+CPVEFTGLLSW LAQKGLK+FRA+++MARGH+EHTPWP+A GH+VAPS +GY
Sbjct: 4 DSQVDEVTQVVSKACQDFNTSVNAPVEVYEEDFGHPAIGPTVIQRAGAFRPPCIRRKLGKIFISSNAPTHPSSSAPVEDGGAGKIVGVSFVDVHAKGSRVATLGPVASLASGAGKNSFVAACAYAEELGFSTL----------------------------------------------------------------------------------------AGGP-------RSDGKVVGYSTG------TI--------------------------RFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHFEHTPWPNATGHIVAPSTTGY 209
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: A0A6H5K2U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U2_9PHAE) HSP 1 Score: 162 bits (409), Expect = 6.850e-45 Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 1
Query: 724 VGHTVAKSQDVFCDIFREGSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLKIFRATILMARGHYEHTPWPDAAGHVVAPSISGY 981
+GHTVAKS D+ CD+FRE SKLHQQAGLPCPRFHC VEFTGLLSWALAQ+GLKIFRATILMARGHYEHTPW D GH++AP+ SGY
Sbjct: 1 MGHTVAKSHDIICDMFRESSKLHQQAGLPCPRFHCRVEFTGLLSWALAQRGLKIFRATILMARGHYEHTPWQDTIGHLMAPTASGY 86
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: A0A6H5K5T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T0_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.340e-37 Identity = 76/91 (83.52%), Postives = 82/91 (90.11%), Query Frame = 1
Query: 61 EVTHVVSKAFQDFNTSIGAPVEVYEEDFGHPEMGPSIIQSICKSYEAYAVVADGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAPGAGKKS 333
EVTHVVSKAFQDFNTSI APVE+YEE+FG PE G +IQSICKS+EAYAVVADGG GKIVGV FVDVHA+GS+ ACLG VSSIAPGAGKKS
Sbjct: 3 EVTHVVSKAFQDFNTSIHAPVELYEEEFGCPETGTGMIQSICKSHEAYAVVADGGTGKIVGVPFVDVHAKGSKEACLGAVSSIAPGAGKKS 93
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: A9P0X9_PICSI (N-acetyltransferase domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P0X9_PICSI) HSP 1 Score: 99.8 bits (247), Expect = 1.070e-19 Identity = 88/283 (31.10%), Postives = 135/283 (47.70%), Query Frame = 1
Query: 73 VVSKAFQDFNTSIGAPVEVYEEDFGHPEMGPSIIQSICKSYEAYAVVA-DGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAP-----GAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYIGGFLDPPSEESLPPPPAPSRVTMKAMVAGDVEECGELFLEAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGKVVGYTTGFYLVGHTVAKSQDVFCDIFREGSKLHQQAGLPCPRFHCPVEFTG-LLSWALAQKGLKIFRATI 900
++ +AF FN S+G P V D+G+ E+ ++ + +S +Y + A D +G +G +F++ G V +GPV + P GAGK A A+ +++ L+QIAAN++SFSLYAKLGF+ Y G +D P +K M DV C EL H G +R DI L + + +D + YTTGF L GH++A S+D F +F L ++ G H P L+ WAL ++GL++ R +
Sbjct: 23 ILHRAFSQFNLSVGIPPHV---DYGNVEIAKKVLHEMLQSPSSYGITAFDNASGLPIGAAFLNFT--GESVQAVGPVF-VDPDWNNKGAGKALMNALIERAKATNATSIRLVQIAANTQSFSLYAKLGFQPVECISYFEGSMDENLHSGASFIPG---FKVKMMEESDVHACSEL----HKSVLGHERETDIRELLQTNPGNSWVAVKDDI--LQAYTTGFCLEGHSIAISEDAFKTLFEV--VLCEKRGCSMT-IHIPGRIHPFLIDWAL-KRGLRLVRLRV 286
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: UPI001F55A25F (GNAT family N-acetyltransferase n=2 Tax=Nostoc TaxID=1177 RepID=UPI001F55A25F) HSP 1 Score: 84.3 bits (207), Expect = 3.790e-14 Identity = 76/266 (28.57%), Postives = 124/266 (46.62%), Query Frame = 1
Query: 139 DFGHPEMGPSIIQSICKSYEAYAVVADGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAPGA-----GKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYIGGFLDPPSEESLPPPPAPSRVTMKAMVAGDVEECGELFLEAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGKVVGYTTGFYLVGHTVAKSQDVFCDIFREGSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLKIFRATILMARGHY 921
DF E G +++ I Y+VVA+ G+++G +F+ EG +A +GP +++ P A G++ A E ++ + L+Q A NSRS SLY KLGF+ + + F P ++P +++ M D+ C +L HG DR ++ +G G MLV + DG+V GYT+ GH VA++ + D+ + A L F+ P+ L W L GL++ + LM+ G Y
Sbjct: 84 DFPSAEFGAAMLTEILADPAVYSVVAEASDGRVIGSNFLW---EGDTIAGVGP-TTVDPAAQNRSVGRRLMEDVLQRAREKRYAGVRLVQAAHNSRSLSLYTKLGFDVREP---LANFEGKPLSLTIP------GRSVRLMTEADLAVCNQLCDRIHGH----DRAGELKAAIGRGTA--MLV--ECDGRVSGYTSEIGFFGHAVAENNE---DLKALIAAAPASAELG---FYVPMRNADLFRWCL-NHGLRVTQTATLMSLGLY 321
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: R1DNJ0_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNJ0_EMIHU) HSP 1 Score: 79.7 bits (195), Expect = 1.430e-12 Identity = 84/301 (27.91%), Postives = 120/301 (39.87%), Query Frame = 1
Query: 55 VDEVTHVVSKAFQDFNTSIGAPVEVYEEDFGHPEMGPSIIQSICK----------SYEAYAVVADGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTC-QYIGGFLDPPSEESLPPPPAPSRVTMKAMVAGDVEECGELFLEAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGKVVGYTTGFYLVGHTVAKSQDVFCDIFREGSKL---HQQAG--LPCPRFHCPVEFTGLLSWALAQKGLKIFRATILMA 909
+DE + AF FN S+G PE P + + K ++ + V + G +VG + ++ + GP++S PGAGK A +M+ AA + + TC +Y+G AP+ +K + A DVEEC L H + C R DI +G P P VARD GKVVGYTTG YL GHTVA S++ + S Q AG +P P P + + W LA+ G + R M+
Sbjct: 6 LDEAASIAFSAFNAFNESVGLA----------PEFPPREVVDVPKYLYSSGLERPGFDVFVAVDE--EGTVVGANMLEYQDGIGGIGXXGPIASKRPGAGKLLMQA--------------VMKAAAEHPACP---------RRTCIEYVGS--------GCCTAEAPAGFVVKPLAASDVEECSAL----HEQVCASRRMGDIGSAVGG--PHPNAVARDEAGKVVGYTTGSYLSGHTVALSEEALQALVVAQSAAIAAAQAAGAPIPPPTLFVPHQHSAFARW-LARNGFLLTRQIASMS 256
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Match: UPI001BDC3314 (GNAT family N-acetyltransferase n=1 Tax=Mycobacterium goodii TaxID=134601 RepID=UPI001BDC3314) HSP 1 Score: 78.6 bits (192), Expect = 1.760e-12 Identity = 79/282 (28.01%), Postives = 128/282 (45.39%), Query Frame = 1
Query: 130 YEEDFGHPEMGPSIIQSICKSYEAYAVVADGGAGKIVGVSFVDVHAEGSRVACLGPVSSIAP-----GAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYIGGFLDPPSEESLPPPPAPSRVTMKAMVAGDVEECGELFLEAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGKVVGYTTGFYLVGHTVAKSQDVFCDIFREGSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLKIFRATILMARGHYEH--TPWPDAAGH 954
+ DF P+ +I + + + VVA+ G+++G +F+D E S V +GPV+ + P G G+ AA A E S++ LMQ A +SRSF LYAKLGF + + + G P P + ++ ++ C L HG +DR ++ + A +V R+ ++ YT+G L GH++A+S D+ + + P F P+ LL W LA +GL+I + LM G Y TP+ + G+
Sbjct: 33 FPRDFATPKEATDLISRLIDNNSFFGVVAERN-GEVIGSNFLD---ERSTVTSVGPVT-VDPRAQDKGVGRALVTAALDRARETRASSVRLMQSAYHSRSFGLYAKLGFTYRESFAVVQG----------PSPQDDDSLVVRRADPPVLDACDILCRGTHG----FDRHGEVNDSIA--AQTAHVVERED--RITAYTSGVGLFGHSIAESN---ADL---QALIAATDDYPGTGFLLPLRNASLLQWCLA-RGLRIVSSMNLMTIGRYYEPTTPYLASVGY 284 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1520.3678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1520.3678.1 >prot_E-fasciculatus_F_contig1520.3678.1 ID=prot_E-fasciculatus_F_contig1520.3678.1|Name=mRNA_E-fasciculatus_F_contig1520.3678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=328bp MTTLELAFLDPKTIKDSQVDEVTHVVSKAFQDFNTSIGAPVEVYEEDFGHback to top mRNA from alignment at E-fasciculatus_F_contig1520:2190..11206- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1520.3678.1 ID=mRNA_E-fasciculatus_F_contig1520.3678.1|Name=mRNA_E-fasciculatus_F_contig1520.3678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9017bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1520:2190..11206- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1520:2190..11206- >mRNA_E-fasciculatus_F_contig1520.3678.1 ID=mRNA_E-fasciculatus_F_contig1520.3678.1|Name=mRNA_E-fasciculatus_F_contig1520.3678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1968bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1520:2190..11206- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |