mRNA_E-fasciculatus_F_contig1519.3671.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: A0A6H5K9Y6_9PHAE (dTMP kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9Y6_9PHAE) HSP 1 Score: 446 bits (1148), Expect = 4.320e-154 Identity = 228/241 (94.61%), Postives = 230/241 (95.44%), Query Frame = 3
Query: 186 LPTATRTGSAATMASTKDAPAGPVKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVGLSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDAKREIGSIQDEIQKIATSVVGEVEGKEIGSLWSRKED 908
+P ATRTG AA MASTKDAPAGP KRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIG MINGFLQNTT IDDRCVHLLFSANRWEAESKIRELLK GTTVVCDRYAYSGVAFSASKP GLSV WCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDA REIGSIQDEIQKI TSVVGEVEGK+IGSLWSRKED
Sbjct: 1 MPAATRTGPAAVMASTKDAPAGPAKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGQMINGFLQNTTGIDDRCVHLLFSANRWEAESKIRELLKVGTTVVCDRYAYSGVAFSASKP-GLSVRWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDANREIGSIQDEIQKIGTSVVGEVEGKDIGSLWSRKED 240
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: A0A835ZMW1_9STRA (dTMP kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMW1_9STRA) HSP 1 Score: 263 bits (671), Expect = 3.640e-82 Identity = 136/228 (59.65%), Postives = 167/228 (73.25%), Query Frame = 3
Query: 225 ASTKDAPAGPV---KRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVGLSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDAKREIGSIQDEIQKIATSVVGEV--EGKEIGSLW 893
A+T+ APAG +RGAFILFEGVDRCGKTTQ LV+ LK+ GHDA MRFPDRTT IG MIN +LQ+T ++DD+C+HLLFSANRWEA S I L AG T+VCDRYAYSGVAFSA+KP GL+V WCK PD+GLPAPD +++LD++VE AM+RGQFGEERYEK +FQR VR F+AL E D G W ++DA + + A + +V EG++I LW
Sbjct: 3 AATEAAPAGDSNGPQRGAFILFEGVDRCGKTTQCERLVKRLKEDGHDAVHMRFPDRTTAIGQMINAYLQSTAEMDDQCIHLLFSANRWEALSTIERRLAAGLTIVCDRYAYSGVAFSAAKP-GLTVDWCKAPDKGLPAPDVVIYLDLAVEAAMERGQFGEERYEKADFQRRVRDNFMALREAD---GERWAVVDAAASRDEVAAAVHAAAAKAIADVKEEGRQIQKLW 226
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: A0A7S2H363_9STRA (dTMP kinase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H363_9STRA) HSP 1 Score: 250 bits (639), Expect = 8.720e-77 Identity = 131/227 (57.71%), Postives = 154/227 (67.84%), Query Frame = 3
Query: 255 VKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDA--------------CFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVGLSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDAKREIGSIQDEIQKIATSVVGEVEGKEIGSLW 893
V RGAFIL EGVDRCGKTTQ +L ++L A H A MRFPDRTT IG MING+L N D+DDR +HLLFSANRWEA +KI + L+AGTT+VCDRYAYSGVAFS +K GLSV WC PDRGLP PD +++LD+SVEDAM+RG FGEERYEKEEFQR V F A+M D W ++DA + I +Q EI IA + + GK I LW
Sbjct: 42 VGRGAFILLEGVDRCGKTTQTKMLADTLSAARHAAPSGAIDDQNMPPRATLMRFPDRTTTIGQMINGYLANGVDMDDRAIHLLFSANRWEARAKIEDTLRAGTTIVCDRYAYSGVAFSGAKE-GLSVEWCMAPDRGLPCPDCVIYLDLSVEDAMQRGAFGEERYEKEEFQRRVSDNFKAIMASDSTP---WHVVDATKSIAEMQAEILAIAEATQRQCRGKPITGLW 264
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: A0A7S2L3C4_9STRA (dTMP kinase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3C4_9STRA) HSP 1 Score: 232 bits (592), Expect = 7.060e-70 Identity = 119/227 (52.42%), Postives = 157/227 (69.16%), Query Frame = 3
Query: 240 APAGPVKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVG------LSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASG-VAWQLIDAKREIGSIQDEIQKIATSVVGEVE-GKEIGSLWS 896
AP+ P KRGAFIL EGVDRCGKTTQ LL++ L G A MRFPDRTT +G +ING+L T +++DR VHLLFSANRWEA + + + L GTT+VCDRYAYSGVAFS++K LS+ WCK D GLPAPD ++FLD++ E+A KRG +G ERYEK+E Q VR F L ++D+ASG V W+++DA + + +Q +I +I + V G ++ +WS
Sbjct: 9 APSAPAKRGAFILLEGVDRCGKTTQCGLLLQHLLALGITALAMRFPDRTTMVGQLINGYLSQTREMEDRAVHLLFSANRWEASNSLAQHLANGTTIVCDRYAYSGVAFSSAKSYPDARHKELSIDWCKACDIGLPAPDVVIFLDLTQEEAQKRGGYGGERYEKKEMQMRVRQRFDELQKDDEASGRVPWKVVDASQSVEDVQRDINQIVEETLQRVNAGADLKKMWS 235
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: L1JWU7_GUITC (dTMP kinase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JWU7_GUITC) HSP 1 Score: 228 bits (580), Expect = 8.970e-69 Identity = 115/213 (53.99%), Postives = 151/213 (70.89%), Query Frame = 3
Query: 261 RGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVGLSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDAKREIGSIQDEIQKIATSVVGEVEGKEIGSLWSR 899
RGA I+ EG+DR GK+TQ LVE L G A M FPDRTT +G +IN +LQ+ D+DD +HLLFSANRWEA IR+ L +G T++ DRYAYSGVAFSA+K L + WCK PDRGLPAPD +++LD+S + A +RG +GEERYEKEEFQ+ VR F ALM ++ A W+ +DA + + + +EI+ IAT +V +V K IGSLW++
Sbjct: 4 RGALIVLEGLDRSGKSTQVIRLVEKLVSMGKKASKMNFPDRTTTVGGLINEYLQSGKDLDDAVIHLLFSANRWEATRSIRDRLSSGETLIVDRYAYSGVAFSAAKGT-LDIEWCKGPDRGLPAPDCVIYLDVSSDVAKQRGGYGEERYEKEEFQKKVRTCFEALMSQEPAM---WRRVDANKTMDEVTEEIEGIATKIVDQVTDKPIGSLWTK 212
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: A0A2R5GGP8_9STRA (dTMP kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGP8_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.450e-67 Identity = 112/218 (51.38%), Postives = 151/218 (69.27%), Query Frame = 3
Query: 240 APAGPVKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVGLSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDAKREIGSIQDEIQKIATSVVGEVEGKEIGSLW 893
A +G RGAFI+FEGVDRCGKTTQ LV +L+ D RFPDRTT G +I+ +L+N ++DD VHLLFSANRWE+ IR+ L AGTT++ DRYA+SGV FSA+K G+ + WCK PD GLPAPD ++FL +++ DAMKRGQFGEERYEK++FQ V F+ + + +W++IDAKR I +I +EI+ +A ++ K + +LW
Sbjct: 2 AVSGMTARGAFIVFEGVDRCGKTTQTQRLVAALQSRKVDVELCRFPDRTTATGKIIDSYLKNGVELDDHAVHLLFSANRWESAQAIRKKLAAGTTLIVDRYAHSGVCFSAAKQ-GMDIEWCKAPDAGLPAPDAVIFLKLAIADAMKRGQFGEERYEKQDFQTKVLDNFMQMKTD------SWRVIDAKRPIDAIAEEIETLALDIINSCADKPLETLW 212
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: A0A7S3H922_9STRA (dTMP kinase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H922_9STRA) HSP 1 Score: 225 bits (573), Expect = 2.620e-67 Identity = 115/228 (50.44%), Postives = 159/228 (69.74%), Query Frame = 3
Query: 213 AATMASTKDAPAGPVKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVGLSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASG-VAWQLIDAKREIGSIQDEIQKIATSVVGEVEGKEIGSLW 893
AA++ +T D RGAFILFEGVDRCGKTTQ +L + L ++ + +RFP+R + IG +I+ +LQ+T++++D+ +HLLFSANRWE I L G T++CDRYAYSGVAF+++K GL + WCK DRGLPAPD I++LDI VEDA KRG FGEERYEK +FQ+ VR F+ L ED+AS V W +++A + I + EI+ I +V+ ++ K +G LW
Sbjct: 18 AASLLTTTDGLRMGASRGAFILFEGVDRCGKTTQVGMLKDYLTKS-RETEQIRFPERKSTIGQLIDSYLQSTSNMNDQSIHLLFSANRWEQSDSIESKLANGNTLICDRYAYSGVAFTSAK--GLDLDWCKSCDRGLPAPDCIIYLDIPVEDAAKRGNFGEERYEKIDFQKKVREQFMLLQSEDQASAAVPWHVVNAAQSIDEVHSEIKNIVDNVLASLDDKPVGKLW 242
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: A0A1Z5K5E1_FISSO (dTMP kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5E1_FISSO) HSP 1 Score: 224 bits (571), Expect = 3.900e-67 Identity = 114/211 (54.03%), Postives = 150/211 (71.09%), Query Frame = 3
Query: 261 RGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVGLSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDAKREIGSIQDEIQKIATSVVGEVEGKEIGSLW 893
RGAF L EGVDRCGKTTQ L++ L QAG A MRFP+RTT G +I+ +LQ T+++DDR +HLLFSANRWE+ I E LKAGT++VCDRYAYSGVAFSASK + + WC+ PDRGLPAPD ++FLD+S E A +RG +G+ERYEK E Q+ VR F L + D GV W+ ++A + + ++D+I IA + +V+ E+ LW
Sbjct: 11 RGAFFLLEGVDRCGKTTQCQRLLQRLLQAGIAATAMRFPNRTTSTGQLIDSYLQQTSNMDDRAIHLLFSANRWESADMIVEQLKAGTSIVCDRYAYSGVAFSASKD-NMDLEWCQAPDRGLPAPDCVIFLDMSTEQAEERGGYGQERYEKREMQQRVRQRFQELSQLD--DGVQWKFVNAAQTMDQVEDDIWSIAQQTLEQVQ-PEVRQLW 217
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: B5Y400_PHATC (dTMP kinase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y400_PHATC) HSP 1 Score: 224 bits (571), Expect = 5.720e-67 Identity = 119/224 (53.12%), Postives = 158/224 (70.54%), Query Frame = 3
Query: 255 VKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASK--PVG---LSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASG-VAWQLIDAKREIGSIQDEIQKIATSVVGEVEG-KEIGSLWSRKE 905
+ RGAF++ EGVDRCGKTTQ+ LL++ L AG AC MRFPDRTT G +I+ +LQ++ ++DDR +HLLFSANRWE+ + L+AGTTV+CDRYAYSGVAFSASK G LS+ WC+ PD+GLPAPD ++FLD+S +A +RG +G ERYEK+E Q VR F L DKASG VAW+ IDA + + ++++I K + V+G K +G +W E
Sbjct: 8 ISRGAFVVLEGVDRCGKTTQSGLLLKRLLAAGIAACSMRFPDRTTATGKIIDQYLQSSQNLDDRAIHLLFSANRWESADALTAHLQAGTTVLCDRYAYSGVAFSASKIDKKGNSLLSLDWCQAPDQGLPAPDCVIFLDLSQAEAEQRGGYGGERYEKKEMQIRVRHRFGDLEAIDKASGRVAWKFIDAAQSVEQVENDIWKAVEETIQAVKGSKALGKMWQDGE 231
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Match: W7TN04_9STRA (dTMP kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN04_9STRA) HSP 1 Score: 224 bits (570), Expect = 8.360e-66 Identity = 116/213 (54.46%), Postives = 146/213 (68.54%), Query Frame = 3
Query: 261 RGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLQNTTDIDDRCVHLLFSANRWEAESKIRELLKAGTTVVCDRYAYSGVAFSASKPVGLSVTWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKASGVAWQLIDAKREIGSIQDEIQKI--ATSVVGEVEGKEIGSLW 893
RGAFI+ EGVDRCGKTTQ +V++L G A +RFPDRTT IG MIN +L N TD+DDR +HLLFSANRWEA + +R L AG T+VCDRYAYSGVAFSA+K G+ WCK DRGLP PD +++LDIS E A KRG++GEERYE + Q VR F LME D W ++DA + + + + K+ AT+ E EG ++G+LW
Sbjct: 112 RGAFIVLEGVDRCGKTTQVARVVKALHAQGRAAEAIRFPDRTTTIGQMINAYLANATDLDDRVIHLLFSANRWEAMASLRSKLAAGMTLVCDRYAYSGVAFSAAKD-GMDFDWCKQCDRGLPQPDAVIYLDISAEAAAKRGRYGEERYENQGMQGRVRENFQKLMEGDSI----WHVVDAGVSLEDVSERVDKVVMATAKRVEEEGLQLGTLW 319 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1519.3671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1519.3671.1 >prot_E-fasciculatus_F_contig1519.3671.1 ID=prot_E-fasciculatus_F_contig1519.3671.1|Name=mRNA_E-fasciculatus_F_contig1519.3671.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=230bp MASTKDAPAGPVKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRback to top mRNA from alignment at E-fasciculatus_F_contig1519:7917..12216- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1519.3671.1 ID=mRNA_E-fasciculatus_F_contig1519.3671.1|Name=mRNA_E-fasciculatus_F_contig1519.3671.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4300bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1519:7917..12216- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1519:7917..12216- >mRNA_E-fasciculatus_F_contig1519.3671.1 ID=mRNA_E-fasciculatus_F_contig1519.3671.1|Name=mRNA_E-fasciculatus_F_contig1519.3671.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1380bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1519:7917..12216- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |