prot_E-fasciculatus_F_contig15189.3668.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15189.3668.1
Unique Nameprot_E-fasciculatus_F_contig15189.3668.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length142
Homology
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: D8LKI8_ECTSI (Divergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI8_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 2.520e-85
Identity = 135/148 (91.22%), Postives = 137/148 (92.57%), Query Frame = 0
Query:    1 RKAAAVPGATHEDQSKLLPSSSTV-AQRPRKEKGSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTR-----TLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 142
            RKAAAVPGAT EDQSKLLPSSST  A +PRKEK SKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDD+G QDYTR     TLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK
Sbjct:   18 RKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 165          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A835YYU6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.960e-27
Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   54 VRLVLVGGCDTGKTCLLRRFLGGYF--DDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFD 138
            VRLV+VG C  GKT ++RR+L GYF  D      Y+ TLGVDFGC+TV L  +RVRLQ+WDT GS  Y SVVSHYL  ADGV + +D
Sbjct:    5 VRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYD 91          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: H3GC27_PHYRM (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_PHYRM)

HSP 1 Score: 95.5 bits (236), Expect = 1.280e-21
Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 0
Query:   46 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGG--------YFDDVGQQD-----YTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 142
            +S D + + +LVL+G    GK+CLL RF GG        Y  D  Q D     Y  T+GVDF  RTV + ++ V+LQ+WDT G E +R++ S Y RGADG++M +DV S+
Sbjct:    1 MSRDYDHLFKLVLIGDSGVGKSCLLLRFAGGRLLDRLTEYVADASQDDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQ 110          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A7S1R9U1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R9U1_ALECA)

HSP 1 Score: 95.9 bits (237), Expect = 1.410e-21
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 0
Query:   48 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 142
            GD + + +LV++G    GK+ LLRRF+ G +D      YT T+GVDFG R+  L  ++V+LQ+WDT GSE +R++ S Y RGA GV++ FDV+ +
Sbjct:    9 GDADFIFKLVVIGDLGVGKSALLRRFVDGLYDTT----YTATIGVDFGTRSCTLDGKKVKLQIWDTAGSERFRAITSSYYRGAHGVIVVFDVSDR 99          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: S7XTQ9_SPRLO (GTP-binding protein YPT1 n=1 Tax=Spraguea lophii (strain 42_110) TaxID=1358809 RepID=S7XTQ9_SPRLO)

HSP 1 Score: 94.4 bits (233), Expect = 2.290e-21
Identity = 39/94 (41.49%), Postives = 63/94 (67.02%), Query Frame = 0
Query:   49 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 142
            D + + +++L+G    GKTCL+ R    Y D++  Q Y  T+GVDF  +TV+L +R+++LQ+WDT G E +R++ S Y RGAD +++ FD+  K
Sbjct:    3 DYDYIFKIILIGNSGVGKTCLINR----YIDNIYNQGYISTIGVDFKIKTVELDNRKIKLQIWDTAGQERFRTITSSYYRGADAIIVVFDLTDK 92          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: W6KMA3_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KMA3_9TRYP)

HSP 1 Score: 94.0 bits (232), Expect = 3.380e-21
Identity = 43/97 (44.33%), Postives = 65/97 (67.01%), Query Frame = 0
Query:   46 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 142
            ++   NQ+++L++VG   TGK+ LL RF+   F +    D T+T+GV+FG + VDL DRRV+LQ+WDT G E Y+SV   Y RG  G ++ +DV ++
Sbjct:    1 MNDKYNQLMKLIIVGDSGTGKSSLLHRFIKNSFPE----DQTQTIGVEFGSKIVDLGDRRVKLQIWDTAGQERYKSVTRSYYRGTIGCLIVYDVTNR 93          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.040e-21
Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   47 SGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 142
            S D + + +LVL+G    GK+CLL RF     DD   + Y  T+GVDF  RTV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV SK
Sbjct:   11 SRDYDHLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSK 102          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A7S2XIP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIP1_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.220e-21
Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 0
Query:   48 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNS 141
            GD + + +LVL+G    GK+CLL RF     DD   + Y  T+GVDF  RTV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV S
Sbjct:   20 GDYDYLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS 109          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A2T7IMV9_THEOR (Rab GTPase n=2 Tax=Theileria orientalis TaxID=68886 RepID=A0A2T7IMV9_THEOR)

HSP 1 Score: 93.6 bits (231), Expect = 6.210e-21
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 0
Query:   46 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 142
            +S D + + +LVL+G    GK+CLL RF    F D     Y  T+GVDF  RTV + ++RV+LQ+WDT G E +R++ S Y RGADG++M +DV  K
Sbjct:    5 ISKDYDYLFKLVLIGDSGVGKSCLLLRFADDSFTD----SYITTIGVDFRFRTVIVNNKRVKLQIWDTAGQERFRTITSTYYRGADGIIMVYDVTDK 97          
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A6U3NLC3_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3NLC3_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.210e-21
Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   47 SGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 142
            S D + + +LVL+G    GK+CLL RF     DD   + Y  T+GVDF  RTV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV SK
Sbjct:   12 SRDYDYLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSK 103          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKI8_ECTSI2.520e-8591.22Divergent RAB-like GTPase, N-terminal myristoylati... [more]
A0A835YYU6_9STRA1.960e-2759.77P-loop containing nucleoside triphosphate hydrolas... [more]
H3GC27_PHYRM1.280e-2143.64Uncharacterized protein n=26 Tax=Oomycota TaxID=47... [more]
A0A7S1R9U1_ALECA1.410e-2146.32Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
S7XTQ9_SPRLO2.290e-2141.49GTP-binding protein YPT1 n=1 Tax=Spraguea lophii (... [more]
W6KMA3_9TRYP3.380e-2144.33Uncharacterized protein n=1 Tax=Phytomonas sp. iso... [more]
A0A7S2N4U8_9STRA4.040e-2146.88Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2XIP1_9STRA5.220e-2146.81Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A2T7IMV9_THEOR6.210e-2146.39Rab GTPase n=2 Tax=Theileria orientalis TaxID=6888... [more]
A0A6U3NLC3_9STRA6.210e-2146.88Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 99..121
score: 36.79
coord: 54..75
score: 37.6
coord: 81..97
score: 24.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 54..142
e-value: 5.6E-6
score: -35.1
NoneNo IPR availableGENE3D3.40.50.300coord: 46..142
e-value: 2.3E-27
score: 97.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 46..142
NoneNo IPR availablePANTHERPTHR24073:SF519RAS-RELATED PROTEIN RAB-44coord: 46..142
NoneNo IPR availablePROSITEPS51419RABcoord: 49..142
score: 14.269
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 54..140
e-value: 7.9E-13
score: 46.5
IPR001806Small GTPasePFAMPF00071Rascoord: 55..141
e-value: 2.6E-21
score: 75.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 51..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15189contigE-fasciculatus_F_contig15189:416..2776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15189.3668.1mRNA_E-fasciculatus_F_contig15189.3668.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15189 416..2777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15189.3668.1 ID=prot_E-fasciculatus_F_contig15189.3668.1|Name=mRNA_E-fasciculatus_F_contig15189.3668.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=142bp
RKAAAVPGATHEDQSKLLPSSSTVAQRPRKEKGSKYRRPPSHLRELSGDI
NQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVD
LADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom