mRNA_E-fasciculatus_F_contig15189.3668.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: D8LKI8_ECTSI (Divergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI8_ECTSI) HSP 1 Score: 261 bits (666), Expect = 2.520e-85 Identity = 135/148 (91.22%), Postives = 137/148 (92.57%), Query Frame = 1
Query: 1 RKAAAVPGATHEDQSKLLPSSSTV-AQRPRKEKGSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTR-----TLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 426
RKAAAVPGAT EDQSKLLPSSST A +PRKEK SKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDD+G QDYTR TLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK
Sbjct: 18 RKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 165
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A835YYU6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.960e-27 Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 160 VRLVLVGGCDTGKTCLLRRFLGGYF--DDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFD 414
VRLV+VG C GKT ++RR+L GYF D Y+ TLGVDFGC+TV L +RVRLQ+WDT GS Y SVVSHYL ADGV + +D
Sbjct: 5 VRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYD 91
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: H3GC27_PHYRM (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_PHYRM) HSP 1 Score: 95.5 bits (236), Expect = 1.280e-21 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 136 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGG--------YFDDVGQQD-----YTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 426
+S D + + +LVL+G GK+CLL RF GG Y D Q D Y T+GVDF RTV + ++ V+LQ+WDT G E +R++ S Y RGADG++M +DV S+
Sbjct: 1 MSRDYDHLFKLVLIGDSGVGKSCLLLRFAGGRLLDRLTEYVADASQDDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQ 110
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A7S1R9U1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R9U1_ALECA) HSP 1 Score: 95.9 bits (237), Expect = 1.410e-21 Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 142 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 426
GD + + +LV++G GK+ LLRRF+ G +D YT T+GVDFG R+ L ++V+LQ+WDT GSE +R++ S Y RGA GV++ FDV+ +
Sbjct: 9 GDADFIFKLVVIGDLGVGKSALLRRFVDGLYDTT----YTATIGVDFGTRSCTLDGKKVKLQIWDTAGSERFRAITSSYYRGAHGVIVVFDVSDR 99
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: S7XTQ9_SPRLO (GTP-binding protein YPT1 n=1 Tax=Spraguea lophii (strain 42_110) TaxID=1358809 RepID=S7XTQ9_SPRLO) HSP 1 Score: 94.4 bits (233), Expect = 2.290e-21 Identity = 39/94 (41.49%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 145 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 426
D + + +++L+G GKTCL+ R Y D++ Q Y T+GVDF +TV+L +R+++LQ+WDT G E +R++ S Y RGAD +++ FD+ K
Sbjct: 3 DYDYIFKIILIGNSGVGKTCLINR----YIDNIYNQGYISTIGVDFKIKTVELDNRKIKLQIWDTAGQERFRTITSSYYRGADAIIVVFDLTDK 92
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.040e-21 Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 139 SGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 426
S D + + +LVL+G GK+CLL RF DD + Y T+GVDF RTV + + V+LQ+WDT G E +R++ S Y RGADG++M +DV SK
Sbjct: 11 SRDYDHLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSK 102
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A7S2XIP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIP1_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 5.220e-21 Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 142 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNS 423
GD + + +LVL+G GK+CLL RF DD + Y T+GVDF RTV + + V+LQ+WDT G E +R++ S Y RGADG++M +DV S
Sbjct: 20 GDYDYLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS 109
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A2T7IMV9_THEOR (Rab GTPase n=2 Tax=Theileria orientalis TaxID=68886 RepID=A0A2T7IMV9_THEOR) HSP 1 Score: 93.6 bits (231), Expect = 6.210e-21 Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 136 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 426
+S D + + +LVL+G GK+CLL RF F D Y T+GVDF RTV + ++RV+LQ+WDT G E +R++ S Y RGADG++M +DV K
Sbjct: 5 ISKDYDYLFKLVLIGDSGVGKSCLLLRFADDSFTD----SYITTIGVDFRFRTVIVNNKRVKLQIWDTAGQERFRTITSTYYRGADGIIMVYDVTDK 97
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: A0A6U3NLC3_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3NLC3_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 6.210e-21 Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 139 SGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 426
S D + + +LVL+G GK+CLL RF DD + Y T+GVDF RTV + + V+LQ+WDT G E +R++ S Y RGADG++M +DV SK
Sbjct: 12 SRDYDYLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSK 103
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Match: L0B2B3_THEEQ (Ras related Rab1a small GTP-binding protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L0B2B3_THEEQ) HSP 1 Score: 93.2 bits (230), Expect = 6.410e-21 Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 139 SGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDVGQQDYTRTLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK 426
S D + + +LVLVG GK+CLL RF F D Y T+GVDF RT+ + D+RV+LQ+WDT G E +R++ S Y RGADG+++ +D+ K
Sbjct: 6 SKDYDYLFKLVLVGDSGVGKSCLLLRFADDSFTD----SYITTIGVDFRFRTIKVNDKRVKLQIWDTAGQERFRTITSTYYRGADGIVLAYDLTDK 97 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15189.3668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15189.3668.1 >prot_E-fasciculatus_F_contig15189.3668.1 ID=prot_E-fasciculatus_F_contig15189.3668.1|Name=mRNA_E-fasciculatus_F_contig15189.3668.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=142bp RKAAAVPGATHEDQSKLLPSSSTVAQRPRKEKGSKYRRPPSHLRELSGDIback to top mRNA from alignment at E-fasciculatus_F_contig15189:416..2777+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15189.3668.1 ID=mRNA_E-fasciculatus_F_contig15189.3668.1|Name=mRNA_E-fasciculatus_F_contig15189.3668.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2362bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15189:416..2777+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15189:416..2777+ >mRNA_E-fasciculatus_F_contig15189.3668.1 ID=mRNA_E-fasciculatus_F_contig15189.3668.1|Name=mRNA_E-fasciculatus_F_contig15189.3668.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=852bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15189:416..2777+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |