mRNA_E-fasciculatus_F_contig15175.3662.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15175.3662.1 vs. uniprot
Match: D8LBY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY5_ECTSI) HSP 1 Score: 303 bits (776), Expect = 6.730e-101 Identity = 151/165 (91.52%), Postives = 155/165 (93.94%), Query Frame = 1
Query: 1 GTKQSLLNGFLKRRKRDIVLVVLTVILLVSAWLLWPILFSLRVDGTTSMSWAAVWTPLWIADGIGLMFFVFLVSWGGIKAPAGWQGEWRDPYPMSMRVLALVKWGLLVVFQVCLVLRLDRHISWSWEEVLAPLMAWVWLRIGGELYRIVLQTKRLFVGRVVAAIK 495
G +SLLNGFLKRRKRDI LVVLTVILLVS LLWPILFSLRVDGTTSMSWAAVWTPLWI DGIGLMFFVF+VSWG IKAPA WQGEWRDPYPMSMRVLALVKWGLLV+FQV LVLRLDRHISWSWEEVLAPLMAWVWLRI GELYRIVLQTKRLFVGRV+AAIK
Sbjct: 33 GGTESLLNGFLKRRKRDIALVVLTVILLVSVSLLWPILFSLRVDGTTSMSWAAVWTPLWITDGIGLMFFVFIVSWGPIKAPAEWQGEWRDPYPMSMRVLALVKWGLLVLFQVLLVLRLDRHISWSWEEVLAPLMAWVWLRIAGELYRIVLQTKRLFVGRVIAAIK 197
BLAST of mRNA_E-fasciculatus_F_contig15175.3662.1 vs. uniprot
Match: A0A6H5JKW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW2_9PHAE) HSP 1 Score: 228 bits (582), Expect = 1.410e-72 Identity = 110/117 (94.02%), Postives = 111/117 (94.87%), Query Frame = 1
Query: 145 MSWAAVWTPLWIADGIGLMFFVFLVSWGGIKAPAGWQGEWRDPYPMSMRVLALVKWGLLVVFQVCLVLRLDRHISWSWEEVLAPLMAWVWLRIGGELYRIVLQTKRLFVGRVVAAIK 495
MSWAAVWTPLWIAD IGLMFFVFLVSWG IKAPA WQGEWRDPYPMSMRVLALVKWGLLV+FQV LVLRLD HISWSWEEVLAPLMAWVWLRI GELYRIVLQTKRLFVGRVVAAIK
Sbjct: 1 MSWAAVWTPLWIADSIGLMFFVFLVSWGPIKAPAEWQGEWRDPYPMSMRVLALVKWGLLVLFQVLLVLRLDHHISWSWEEVLAPLMAWVWLRIIGELYRIVLQTKRLFVGRVVAAIK 117
BLAST of mRNA_E-fasciculatus_F_contig15175.3662.1 vs. uniprot
Match: A0A6H5K446_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K446_9PHAE) HSP 1 Score: 154 bits (390), Expect = 2.460e-41 Identity = 75/144 (52.08%), Postives = 102/144 (70.83%), Query Frame = 1
Query: 7 KQSLLNGFLKRRKRDIVLVVLTVILLVSAWLLWPILFSLRVDGTTSMSWAAVWTPLWIADGIGLMFFVFLVSWGGIKAPAGWQGEWRDPYPMSMRVLALVKWGLLVVFQVCLVLRLDRHISWSWEEVLAPLMAWVWLRIGGELY 438
K +++ FL+ RD + +V+ V+L V A LLWPILF +VDG TS SW A+WTPLWI D +GL +F++L+S G IKAP G + W DP+P+ +RVLALVKW LL +FQV L ++LD I WS+ V +PL+AW+ L I G +Y
Sbjct: 105 KDNMIKNFLRMGTRDRLRLVVFVLLFVGAVLLWPILFCAKVDGDTSASWVALWTPLWIYDALGLWYFMYLISLGQIKAPEGMEEGWTDPFPLPLRVLALVKWTLLFLFQVFLTMQLDGDIDWSYAVVGSPLLAWMGLLIVGHVY 248
BLAST of mRNA_E-fasciculatus_F_contig15175.3662.1 vs. uniprot
Match: A0A7S1UVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UVB4_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.740e-15 Identity = 55/147 (37.41%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 94 WLLWPILFSLRVDGTTSMSWAAVWTPLWIADGIGLMFFVFLVSWGGIKAPAGWQGE-WRDPYPMSMRVLALVKWGLLVVFQVCLVLRLDRHIS-WSWEEVLAPLMAW----VWLRIGGELYRIV-LQTKRLFVGRVVAAIKVREKEL 513
WL PI+ L VD +WA PLWI D + ++ G I P E W DP PMS R+ +L ++GLLV+FQV +VLRLD +S W W V PL W +W + RIV ++ +G+ + V EKEL
Sbjct: 142 WL--PIMVCLHVDDVLKATWAGTLLPLWIWDAFIFFYHSRVIMMGPIPRPDHISPEDWVDPLPMSKRIFSLARFGLLVLFQVLMVLRLDGVVSSWPWAVVFGPLYIWEFTTLWKKWPLARMRIVTVEDLETALGKPFSEFTVAEKEL 286
BLAST of mRNA_E-fasciculatus_F_contig15175.3662.1 vs. uniprot
Match: A0A139AY67_GONPJ (DnaJ-domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AY67_GONPJ) HSP 1 Score: 58.9 bits (141), Expect = 4.860e-7 Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 1
Query: 49 DIVLVVLTVILLVSAWLLWPILFSLRVDGTTSMSWAAVWTPLWIADGIGLMFFVFLVSWGGIKAPAGWQGEWRDPYPMSMR--------------VLALVKWGLLVVFQVCLVLRLDRHISWSWEEVLAP 396
++++VV T+ +L LL+PI SL++DG S SWA + P+WI D + FL++ K +G+ + +S R L+++GL++V QV LVLRL +SW W + +P
Sbjct: 115 NVLVVVATLFIL--TLLLFPIFLSLQIDGHISWSWAVIGIPIWIFDVLAF----FLIAGAPTKGEHLDEGDDPNHSGLSQREREQARQRAARTAKYFNLLEFGLVLVAQVFLVLRLSGTVSWVWAAIFSP 238
BLAST of mRNA_E-fasciculatus_F_contig15175.3662.1 vs. uniprot
Match: A0A2R5H1F3_9STRA (DnaJ protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H1F3_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 5.630e-6 Identity = 39/134 (29.10%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 40 RKRDIVLVVLTVILLVSAWLLWPILFSLRVDGTTSMS------WAAVWTPLWIADGIGLMFFVFLVSWGGI-----KAPAGWQGEWRDPYPM--SMRVLALVKWGLLVVFQVCLVLRLDRHISWSWEEVLAPLM 402
RKRD ++V + + LL+PIL S+R D S WA + PLW+ + + + F V + + + W + + +R+ +K GL+++F++ LVL+LD + WSW VL P+M
Sbjct: 94 RKRDRFMLVFAISFVSFILLLFPILLSIRWDALEGGSDSKPYAWAVAFIPLWVLEVLVTVIFAEQVRQEPLDKSDPEVDDDVRAMWNENERVFNRLRIEFGIKMGLVLIFEIFLVLQLDEVVDWSWYVVLLPMM 227
BLAST of mRNA_E-fasciculatus_F_contig15175.3662.1 vs. uniprot
Match: A0A8H7ER49_9FUNG (J domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ER49_9FUNG) HSP 1 Score: 52.8 bits (125), Expect = 6.230e-5 Identity = 36/118 (30.51%), Postives = 50/118 (42.37%), Query Frame = 1
Query: 118 SLRVDGTTSMSWAAVWTPLWIADGIGLMFFVFLVSWGGIKAPAGWQGEW----------------------RDPYPMSMRVLALVKWGLLVVFQVCLVLRLDRHISWSWEEVLAPLMA 405
++R+D T SWA VW PLWI D I + F + + R + R+L LV W LL++FQV +VLRLD ++WS + AP A
Sbjct: 114 TVRIDEITQWSWAVVWIPLWIIDAI-CCYAAFQHVLKAVNSKDXXXXXXXXXXXXXXXXXXXXXSEQLRATRRRVRLFRRLLYLVYWVLLLLFQVFIVLRLDDKVTWSATVIFAPYFA 230 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15175.3662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15175.3662.1 >prot_E-fasciculatus_F_contig15175.3662.1 ID=prot_E-fasciculatus_F_contig15175.3662.1|Name=mRNA_E-fasciculatus_F_contig15175.3662.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=174bp GTKQSLLNGFLKRRKRDIVLVVLTVILLVSAWLLWPILFSLRVDGTTSMSback to top mRNA from alignment at E-fasciculatus_F_contig15175:712..3077- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15175.3662.1 ID=mRNA_E-fasciculatus_F_contig15175.3662.1|Name=mRNA_E-fasciculatus_F_contig15175.3662.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2366bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15175:712..3077- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15175:712..3077- >mRNA_E-fasciculatus_F_contig15175.3662.1 ID=mRNA_E-fasciculatus_F_contig15175.3662.1|Name=mRNA_E-fasciculatus_F_contig15175.3662.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1044bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15175:712..3077- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |